FF:10188-103D8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005072 | ||
|accession_numbers=CAGE;DRX008634;DRR009506;DRZ000931;DRZ002316;DRZ012281;DRZ013666 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0002360,UBERON:0000479,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000094,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0010743 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010188 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.58!377.34!TSC22D4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.37!231.01!PEG3;;chr21:34442439..34442455,+!p1@OLIG1!2.15!139.53!OLIG1;;chr2:73520667..73520683,-!p1@EGR4!2.15!139.53!EGR4;;chr4:57547454..57547469,-!p1@HOPX!2.05!111.67!HOPX;;chr17:53342311..53342400,+!p1@HLF!1.93!95.65!HLF;;chr9:77112244..77112262,+!p1@RORB!1.91!89.29!RORB;;chr11:66188503..66188511,+!p1@NPAS4!1.90!77.66!NPAS4;;chr17:37764128..37764258,-!p1@NEUROD2!1.82!65.82!NEUROD2;;chr9:114287433..114287513,+!p1@ZNF483!1.77!145.67!ZNF483;;chr15:80733570..80733659,+!p2@ARNT2!1.77!58.36!ARNT2;;chr3:181429704..181429722,+!p1@SOX2!1.76!56.38!SOX2;;chr15:80735246..80735321,+!p3@ARNT2!1.72!51.34!ARNT2;;chr2:95963052..95963106,+!p1@KCNIP3!1.68!46.51!KCNIP3;;chr14:29235961..29236008,+!p1@FOXG1!1.67!46.29!FOXG1;;chr22:38380543..38380569,-!p1@SOX10!1.66!44.54!SOX10;;chr10:64134120..64134183,+!p1@ZNF365!1.65!52.21!ZNF365;;chr11:8102846..8102892,+!p1@TUB!1.63!57.92!TUB;;chr12:52437488..52437507,+!p2@NR4A1!1.63!41.46!NR4A1;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.63!41.24!SMARCE1;;chr12:52445218..52445237,+!p1@NR4A1!1.55!417.05!NR4A1;;chr5:88178983..88179012,-!p1@MEF2C!1.55!253.61!MEF2C;;chr4:57522166..57522260,-!p2@HOPX!1.55!39.71!HOPX;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.55!34.88!POU3F3;;chr2:162272785..162272836,+!p1@TBR1!1.51!31.37!TBR1;;chr8:40755333..40755352,-!p1@ZMAT4!1.50!30.93!ZMAT4;;chr21:34398234..34398250,+!p1@OLIG2!1.50!30.49!OLIG2;;chr3:147127142..147127168,+!p1@ZIC1!1.50!30.49!ZIC1;;chr7:31380292..31380351,-!p1@NEUROD6!1.49!30.06!NEUROD6;;chr15:80696703..80696754,+!p1@ARNT2!1.48!38.17!ARNT2;;chr1:157069590..157069607,-!p1@ETV3L!1.48!29.18!ETV3L;;chrX:25034067..25034088,-!p1@ARX!1.47!28.74!ARX;;chr8:22550982..22550999,-!p1@EGR3!1.45!74.59!EGR3;;chr19:57352109..57352153,-!p2@ZIM2!1.44!26.33!ZIM2;;chr4:81118647..81118666,+!p1@PRDM8!1.43!34.22!PRDM8;;chr21:34442540..34442560,+!p2@OLIG1!1.43!25.67!OLIG1;;chr19:13135582..13135600,+!p3@NFIX!1.42!25.01!NFIX;;chr20:62680984..62680999,-!p1@SOX18!1.40!31.59!SOX18;;chr2:166326200..166326216,+!p1@CSRNP3!1.39!34.00!CSRNP3;;chr2:2334997..2335053,-!p1@MYT1L!1.39!23.47!MYT1L;;chr1:2461692..2461710,-!p1@HES5!1.39!23.47!HES5;;chr22:41763452..41763466,+!p2@TEF!1.38!23.04!TEF;;chr3:147127177..147127194,+!p2@ZIC1!1.37!22.60!ZIC1;;chr3:181429741..181429767,+!p2@SOX2!1.37!22.60!SOX2;;chr19:54058073..54058088,+!p1@ZNF331!1.37!22.38!ZNF331;;chr9:126774018..126774055,+!p1@LHX2!1.36!21.94!LHX2;;chr1:244214577..244214593,+!p1@ZNF238!1.35!21.50!ZNF238;;chr18:53070846..53070902,-!p6@TCF4!1.34!20.84!TCF4;;chr5:88179017..88179046,-!p2@MEF2C!1.33!80.30!MEF2C;;chr12:26277956..26277980,-!p1@BHLHE41!1.33!71.74!BHLHE41;;chr12:26277817..26277863,-!p2@BHLHE41!1.33!27.42!BHLHE41;;chr2:157189180..157189290,-!p1@NR4A2!1.31!99.16!NR4A2;;chr12:54779511..54779577,-!p5@ZNF385A!1.31!19.31!ZNF385A;;chr19:54041669..54041697,+!p2@ZNF331!1.31!19.31!ZNF331;;chr11:113930425..113930471,+!p1@ZBTB16!1.29!26.55!ZBTB16;;chr6:126112039..126112062,+!p8@NCOA7!1.29!22.16!NCOA7;;chr2:182545234..182545252,-!p1@NEUROD1!1.29!18.43!NEUROD1;;chr6:19837592..19837621,+!p1@ID4!1.28!109.25!ID4;;chr19:38720294..38720348,-!p1@DPF1!1.28!22.60!DPF1;;chr10:64576105..64576133,-!p1@EGR2!1.26!34.66!EGR2;;chr17:7492684..7492778,-!p2@SOX15!1.25!34.88!SOX15;;chr8:80679993..80680011,-!p1@HEY1!1.25!24.35!HEY1;;chr2:95963120..95963136,+!p2@KCNIP3!1.25!16.67!KCNIP3;;chr11:61520075..61520136,+!p1@C11orf9!1.24!34.22!C11orf9;;chr3:24536253..24536328,-!p1@THRB!1.24!30.93!THRB;;chr2:145277882..145277967,-!p3@ZEB2!1.24!28.30!ZEB2;;chr14:29236269..29236285,+!p3@FOXG1!1.23!16.02!FOXG1;;chr11:125034640..125034655,+!p1@PKNOX2!1.23!15.80!PKNOX2;;chr19:13135386..13135435,+!p4@NFIX!1.23!15.80!NFIX;;chr12:54785074..54785122,-!p2@ZNF385A!1.22!23.91!ZNF385A;;chr5:92920256..92920282,+!p7@NR2F1!1.22!19.09!NR2F1;;chr1:40105299..40105326,-!p1@HEYL!1.21!15.36!HEYL;;chr9:102584159..102584174,+!p2@NR4A3!1.20!26.55!NR4A3;;chrX:85969626..85969664,+!p1@DACH2!1.20!14.92!DACH2;;chr13:100634031..100634045,+!p1@ZIC2!1.18!14.26!ZIC2;;chr14:29234581..29234601,+!p2@FOXG1!1.18!14.26!FOXG1;;chr4:57522598..57522664,-!p3@HOPX!1.18!14.04!HOPX;;chr12:55413751..55413765,+!p1@NEUROD4!1.16!13.60!NEUROD4;;chr6:143266185..143266238,-!p2@HIVEP2!1.15!17.99!HIVEP2;;chr14:33403881..33403924,+!p1@NPAS3!1.15!13.16!NPAS3;;chr17:38219209..38219230,+!p1@THRA!1.14!167.39!THRA;;chr10:38265517..38265591,-!p1@ZNF25!1.14!50.02!ZNF25;;chrX:118739835..118739862,-!p1@NKRF!1.14!14.26!NKRF;;chr10:119302232..119302265,+!p1@EMX2!1.14!12.94!EMX2;;chr2:60781201..60781258,-!p3@BCL11A!1.14!12.94!BCL11A;;chr16:1031762..1031781,+!p1@SOX8!1.14!12.94!SOX8;;chr9:77112225..77112238,+!p2@RORB!1.14!12.72!RORB;;chr9:102584262..102584276,+!p1@NR4A3!1.13!27.86!NR4A3;;chr4:57522674..57522699,-!p5@HOPX!1.13!12.50!HOPX;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.12!12.29!POU3F3;;chr10:35484053..35484076,+!p1@CREM!1.10!29.18!CREM;;chr10:1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| |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.58!377.34!TSC22D4;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.37!231.01!PEG3;;chr21:34442439..34442455,+!p1@OLIG1!2.15!139.53!OLIG1;;chr2:73520667..73520683,-!p1@EGR4!2.15!139.53!EGR4;;chr4:57547454..57547469,-!p1@HOPX!2.05!111.67!HOPX;;chr17:53342311..53342400,+!p1@HLF!1.93!95.65!HLF;;chr9:77112244..77112262,+!p1@RORB!1.91!89.29!RORB;;chr11:66188503..66188511,+!p1@NPAS4!1.90!77.66!NPAS4;;chr17:37764128..37764258,-!p1@NEUROD2!1.82!65.82!NEUROD2;;chr9:114287433..114287513,+!p1@ZNF483!1.77!145.67!ZNF483;;chr15:80733570..80733659,+!p2@ARNT2!1.77!58.36!ARNT2;;chr3:181429704..181429722,+!p1@SOX2!1.76!56.38!SOX2;;chr15:80735246..80735321,+!p3@ARNT2!1.72!51.34!ARNT2;;chr2:95963052..95963106,+!p1@KCNIP3!1.68!46.51!KCNIP3;;chr14:29235961..29236008,+!p1@FOXG1!1.67!46.29!FOXG1;;chr22:38380543..38380569,-!p1@SOX10!1.66!44.54!SOX10;;chr10:64134120..64134183,+!p1@ZNF365!1.65!52.21!ZNF365;;chr11:8102846..8102892,+!p1@TUB!1.63!57.92!TUB;;chr12:52437488..52437507,+!p2@NR4A1!1.63!41.46!NR4A1;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.63!41.24!SMARCE1;;chr12:52445218..52445237,+!p1@NR4A1!1.55!417.05!NR4A1;;chr5:88178983..88179012,-!p1@MEF2C!1.55!253.61!MEF2C;;chr4:57522166..57522260,-!p2@HOPX!1.55!39.71!HOPX;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.55!34.88!POU3F3;;chr2:162272785..162272836,+!p1@TBR1!1.51!31.37!TBR1;;chr8:40755333..40755352,-!p1@ZMAT4!1.50!30.93!ZMAT4;;chr21:34398234..34398250,+!p1@OLIG2!1.50!30.49!OLIG2;;chr3:147127142..147127168,+!p1@ZIC1!1.50!30.49!ZIC1;;chr7:31380292..31380351,-!p1@NEUROD6!1.49!30.06!NEUROD6;;chr15:80696703..80696754,+!p1@ARNT2!1.48!38.17!ARNT2;;chr1:157069590..157069607,-!p1@ETV3L!1.48!29.18!ETV3L;;chrX:25034067..25034088,-!p1@ARX!1.47!28.74!ARX;;chr8:22550982..22550999,-!p1@EGR3!1.45!74.59!EGR3;;chr19:57352109..57352153,-!p2@ZIM2!1.44!26.33!ZIM2;;chr4:81118647..81118666,+!p1@PRDM8!1.43!34.22!PRDM8;;chr21:34442540..34442560,+!p2@OLIG1!1.43!25.67!OLIG1;;chr19:13135582..13135600,+!p3@NFIX!1.42!25.01!NFIX;;chr20:62680984..62680999,-!p1@SOX18!1.40!31.59!SOX18;;chr2:166326200..166326216,+!p1@CSRNP3!1.39!34.00!CSRNP3;;chr2:2334997..2335053,-!p1@MYT1L!1.39!23.47!MYT1L;;chr1:2461692..2461710,-!p1@HES5!1.39!23.47!HES5;;chr22:41763452..41763466,+!p2@TEF!1.38!23.04!TEF;;chr3:147127177..147127194,+!p2@ZIC1!1.37!22.60!ZIC1;;chr3:181429741..181429767,+!p2@SOX2!1.37!22.60!SOX2;;chr19:54058073..54058088,+!p1@ZNF331!1.37!22.38!ZNF331;;chr9:126774018..126774055,+!p1@LHX2!1.36!21.94!LHX2;;chr1:244214577..244214593,+!p1@ZNF238!1.35!21.50!ZNF238;;chr18:53070846..53070902,-!p6@TCF4!1.34!20.84!TCF4;;chr5:88179017..88179046,-!p2@MEF2C!1.33!80.30!MEF2C;;chr12:26277956..26277980,-!p1@BHLHE41!1.33!71.74!BHLHE41;;chr12:26277817..26277863,-!p2@BHLHE41!1.33!27.42!BHLHE41;;chr2:157189180..157189290,-!p1@NR4A2!1.31!99.16!NR4A2;;chr12:54779511..54779577,-!p5@ZNF385A!1.31!19.31!ZNF385A;;chr19:54041669..54041697,+!p2@ZNF331!1.31!19.31!ZNF331;;chr11:113930425..113930471,+!p1@ZBTB16!1.29!26.55!ZBTB16;;chr6:126112039..126112062,+!p8@NCOA7!1.29!22.16!NCOA7;;chr2:182545234..182545252,-!p1@NEUROD1!1.29!18.43!NEUROD1;;chr6:19837592..19837621,+!p1@ID4!1.28!109.25!ID4;;chr19:38720294..38720348,-!p1@DPF1!1.28!22.60!DPF1;;chr10:64576105..64576133,-!p1@EGR2!1.26!34.66!EGR2;;chr17:7492684..7492778,-!p2@SOX15!1.25!34.88!SOX15;;chr8:80679993..80680011,-!p1@HEY1!1.25!24.35!HEY1;;chr2:95963120..95963136,+!p2@KCNIP3!1.25!16.67!KCNIP3;;chr11:61520075..61520136,+!p1@C11orf9!1.24!34.22!C11orf9;;chr3:24536253..24536328,-!p1@THRB!1.24!30.93!THRB;;chr2:145277882..145277967,-!p3@ZEB2!1.24!28.30!ZEB2;;chr14:29236269..29236285,+!p3@FOXG1!1.23!16.02!FOXG1;;chr11:125034640..125034655,+!p1@PKNOX2!1.23!15.80!PKNOX2;;chr19:13135386..13135435,+!p4@NFIX!1.23!15.80!NFIX;;chr12:54785074..54785122,-!p2@ZNF385A!1.22!23.91!ZNF385A;;chr5:92920256..92920282,+!p7@NR2F1!1.22!19.09!NR2F1;;chr1:40105299..40105326,-!p1@HEYL!1.21!15.36!HEYL;;chr9:102584159..102584174,+!p2@NR4A3!1.20!26.55!NR4A3;;chrX:85969626..85969664,+!p1@DACH2!1.20!14.92!DACH2;;chr13:100634031..100634045,+!p1@ZIC2!1.18!14.26!ZIC2;;chr14:29234581..29234601,+!p2@FOXG1!1.18!14.26!FOXG1;;chr4:57522598..57522664,-!p3@HOPX!1.18!14.04!HOPX;;chr12:55413751..55413765,+!p1@NEUROD4!1.16!13.60!NEUROD4;;chr6:143266185..143266238,-!p2@HIVEP2!1.15!17.99!HIVEP2;;chr14:33403881..33403924,+!p1@NPAS3!1.15!13.16!NPAS3;;chr17:38219209..38219230,+!p1@THRA!1.14!167.39!THRA;;chr10:38265517..38265591,-!p1@ZNF25!1.14!50.02!ZNF25;;chrX:118739835..118739862,-!p1@NKRF!1.14!14.26!NKRF;;chr10:119302232..119302265,+!p1@EMX2!1.14!12.94!EMX2;;chr2:60781201..60781258,-!p3@BCL11A!1.14!12.94!BCL11A;;chr16:1031762..1031781,+!p1@SOX8!1.14!12.94!SOX8;;chr9:77112225..77112238,+!p2@RORB!1.14!12.72!RORB;;chr9:102584262..102584276,+!p1@NR4A3!1.13!27.86!NR4A3;;chr4:57522674..57522699,-!p5@HOPX!1.13!12.50!HOPX;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.12!12.29!POU3F3;;chr10:35484053..35484076,+!p1@CREM!1.10!29.18!CREM;;chr10:134599649..134599653,-!p1@NKX6-2!1.10!11.63!NKX6-2;;chr19:46801639..46801699,+!p1@HIF3A!1.10!11.63!HIF3A;;chr8:22550530..22550609,-!p2@EGR3!1.10!11.63!EGR3;;chr16:79634624..79634642,-!p1@MAF!1.09!44.32!MAF;;chr15:31658288..31658338,+!p4@KLF13!1.09!11.19!KLF13;;chr12:106976678..106976708,+!p2@RFX4!1.09!11.19!RFX4;;chr13:45010939..45011033,-!p1@TSC22D1!1.07!709.27!TSC22D1;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.55!FOXC2;;chr12:103351444..103351461,+!p1@ASCL1!1.06!10.53!ASCL1;;chr10:48355030..48355090,+!p1@ZNF488!1.05!13.16!ZNF488;;chr11:8102819..8102845,+!p3@TUB!1.05!12.72!TUB;;chr1:151032860..151032918,+!p1@MLLT11!1.04!118.69!MLLT11;;chrY:21906594..21906622,-!p1@KDM5D!1.04!10.09!KDM5D;;chr4:57522513..57522548,-!p4@HOPX!1.04!9.87!HOPX;;chr10:64133862..64133884,+!p4@ZNF365!1.04!9.87!ZNF365;;chr11:31832658..31832681,-!p1@PAX6!1.04!9.87!PAX6;;chr6:126070769..126070801,+!p1@HEY2!1.03!11.19!HEY2;;chr8:30890810..30890880,-!p1@PURG!1.03!9.65!PURG;;chr12:106976774..106976788,+!p1@RFX4!1.03!9.65!RFX4;;chr19:45971246..45971265,+!p1@FOSB!1.01!177.04!FOSB;;chr6:85474299..85474324,-!p1@TBX18!1.01!16.67!TBX18;;chr11:31832862..31832884,-!p2@PAX6!1.01!9.21!PAX6;;chr2:19558373..19558392,-!p1@OSR1!1.00!25.01!OSR1;;chr1:244219775..244219893,+!p2@ZNF238!1.00!12.50!ZNF238;;chr7:63505799..63505904,+!p1@ZNF727!1.00!8.99!ZNF727;;chr8:145560371..145560449,-!p1@SCRT1!1.00!8.99!SCRT1;;chrX:106959661..106959763,-!p4@TSC22D3!0.99!26.11!TSC22D3;;chr2:166428839..166428859,+!p2@CSRNP3!0.99!8.78!CSRNP3;;chr10:64134045..64134083,+!p3@ZNF365!0.99!8.78!ZNF365;;chr17:38256822..38256851,-!p1@NR1D1!0.98!68.67!NR1D1;;chr1:151032782..151032801,+!p4@MLLT11!0.98!17.55!MLLT11;;chr8:145560111..145560165,-!p2@SCRT1!0.98!8.56!SCRT1;;chr3:18466787..18466839,-!p1@SATB1!0.97!38.39!SATB1;;chr5:88179230..88179270,-!p4@MEF2C!0.97!16.45!MEF2C;;chr19:38085768..38085821,+!p1@ZNF540!0.97!12.72!ZNF540;;chr8:80680024..80680046,-!p2@HEY1!0.97!9.43!HEY1;;chr19:48325184..48325211,+!p1@CRX!0.97!8.34!CRX;;chr14:58798013..58798071,+!p2@ARID4A!0.97!8.34!ARID4A;;chr1:151032922..151032951,+!p2@MLLT11!0.96!13.60!MLLT11;;chr12:26277929..26277955,-!p3@BHLHE41!0.96!11.63!BHLHE41;;chr3:126076242..126076257,-!p1@KLF15!0.96!10.09!KLF15;;chr5:134871645..134871660,-!p1@NEUROG1!0.96!8.12!NEUROG1;;chr2:42721205..42721307,+!p4@MTA3!0.95!7.90!MTA3;;chr3:21792682..21792720,-!p1@ZNF385D!0.95!7.90!ZNF385D;;chr12:103352277..103352324,+!p2@ASCL1!0.95!7.90!ASCL1;;chr15:80696410..80696477,+!p6@ARNT2!0.95!7.90!ARNT2;;chr15:80696666..80696700,+!p4@ARNT2!0.95!7.90!ARNT2;;chr9:126773880..126773895,+!p2@LHX2!0.94!7.68!LHX2;;chr19:58545454..58545498,+!p1@ZSCAN1!0.94!7.68!ZSCAN1;;chr21:39870339..39870443,-!p1@ERG!0.94!7.68!ERG;;chr14:57277178..57277203,-!p1@OTX2!0.94!7.68!OTX2;;chr2:180726254..180726275,-!p4@ZNF385B!0.94!7.68!ZNF385B;;chr14:75745523..75745537,+!p1@FOS!0.93!924.27!FOS;;chr22:41777927..41777971,+!p1@TEF!0.93!64.50!TEF;;chr2:162272889..162272915,+!p2@TBR1!0.93!7.46!TBR1;;chr2:239148671..239148686,-!p1@HES6!0.92!27.64!HES6;;chr2:60780607..60780624,-!p2@BCL11A!0.92!23.25!BCL11A;;chr16:79634595..79634620,-!p2@MAF!0.92!13.82!MAF;;chr12:12764995..12765017,+!p3@CREBL2!0.92!10.53!CREBL2;;chr19:57183114..57183145,-!p1@ZNF835!0.92!8.34!ZNF835;;chr2:172949484..172949522,+!p1@DLX1!0.92!7.24!DLX1;;chrX:118739782..118739829,-!p2@NKRF!0.92!7.24!NKRF;;chr10:35484090..35484104,+!p6@CREM!0.92!7.24!CREM;;chr4:4861385..4861398,+!p1@MSX1!0.91!21.94!MSX1;;chr19:53636125..53636178,-!p1@ZNF415!0.91!20.84!ZNF415;;chr1:214161272..214161322,+!p1@PROX1!0.91!10.31!PROX1;;chr17:38219143..38219154,+!p2@THRA!0.90!25.89!THRA;;chr17:38219184..38219195,+!p3@THRA!0.90!14.26!THRA;;chr5:88179195..88179224,-!p3@MEF2C!0.90!11.19!MEF2C;;chr8:80680078..80680101,-!p3@HEY1!0.90!7.68!HEY1;;chr17:74137321..74137337,-!p1@FOXJ1!0.90!7.02!FOXJ1;;chr9:126774058..126774081,+!p3@LHX2!0.90!7.02!LHX2;;chr2:192015701..192015743,-!p1@STAT4!0.89!9.43!STAT4;;chr10:111987079..111987115,+!p3@MXI1!0.89!9.43!MXI1;;chr11:8040739..8040815,+!p4@TUB!0.89!6.80!TUB;;chr3:24536332..24536358,-!p2@THRB!0.89!6.80!THRB;;chr19:13135566..13135577,+!p9@NFIX!0.89!6.80!NFIX;;chr6:126112074..126112144,+!p1@NCOA7!0.88!93.24!NCOA7;;chr1:61548069..61548102,+!p3@NFIA!0.88!16.67!NFIA;;chr11:113930291..113930339,+!p2@ZBTB16!0.88!10.97!ZBTB16;;chr11:125034605..125034636,+!p2@PKNOX2!0.88!6.58!PKNOX2;;chr20:30433396..30433414,-!p1@FOXS1!0.88!6.58!FOXS1;;chrX:102000987..102001029,+!p3@BHLHB9!0.88!6.58!BHLHB9;;chr16:51185318..51185348,-!p2@SALL1!0.87!6.36!SALL1;;chr8:53322304..53322340,-!p1@ST18!0.87!6.36!ST18;;chr2:60780753..60780800,-!p1@BCL11A!0.86!32.69!BCL11A;;chr1:47903709..47903764,+!p1@BC169308!0.86!7.24!FOXD2;;chr9:102584128..102584144,+!p3@NR4A3!0.85!12.07!NR4A3;;chr8:60031682..60031710,-!p2@TOX!0.85!10.09!TOX;;chr8:55370487..55370503,+!p1@SOX17!0.85!6.14!SOX17;;chr11:85393886..85393913,-!p3@CREBZF!0.85!6.14!CREBZF;;chrX:106960285..106960299,-!p1@TSC22D3!0.84!169.58!TSC22D3;;chr7:150974206..150974255,-!p1@SMARCD3!0.84!39.49!SMARCD3;;chr16:86544113..86544145,+!p1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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0010743 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cerebral%2520meninges%252c%2520adult.CNhs12840.10188-103D8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cerebral%2520meninges%252c%2520adult.CNhs12840.10188-103D8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cerebral%2520meninges%252c%2520adult.CNhs12840.10188-103D8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/cerebral%2520meninges%252c%2520adult.CNhs12840.10188-103D8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/cerebral%2520meninges%252c%2520adult.CNhs12840.10188-103D8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10188-103D8 | |id=FF:10188-103D8 | ||
|is_a=EFO:0002091;;FF:0010188 | |is_a=EFO:0002091;;FF:0010188 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs12840 | |||
|library_id_phase_based=2:CNhs12840 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10188 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10188 | |||
|name=cerebral meninges, adult | |name=cerebral meninges, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 43: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12840,LSID973,release012,COMPLETED | |profile_hcage=CNhs12840,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234043-10 | |rna_catalog_number=R1234043-10 | ||
| Line 57: | Line 78: | ||
|rna_tube_id=103D8 | |rna_tube_id=103D8 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age=66 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 73: | Line 95: | ||
|sample_id=10188 | |sample_id=10188 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=M | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
| Line 79: | Line 101: | ||
|top_motifs=EGR1..3:3.99735320905;REST:3.84288814956;NHLH1,2:3.60133139598;MTF1:3.49709746857;ZBTB6:3.31412075514;MTE{core}:3.28229042754;MYFfamily:3.27563510648;PAX6:3.14814860949;ATF2:3.09584997157;RFX1:3.08761322366;MED-1{core}:3.04645805316;CRX:3.04386752917;ZFP161:3.02361829265;PRRX1,2:2.92112586042;TFAP2B:2.88082505628;CUX2:2.68117262567;DBP:2.58220919638;MAZ:2.51517539487;GTF2I:2.5103323456;PAX5:2.4673784908;SOX5:2.44958485417;RFX2..5_RFXANK_RFXAP:2.43182928688;HOXA9_MEIS1:2.43030665794;MZF1:2.35609425064;HBP1_HMGB_SSRP1_UBTF:2.32678012716;OCT4_SOX2{dimer}:2.32414012203;POU5F1:2.28556813523;AHR_ARNT_ARNT2:2.22230741293;PRDM1:2.21962675101;HIC1:2.20195897216;BREu{core}:2.13264058509;HMGA1,2:2.09297882869;PATZ1:2.09266758189;POU6F1:2.06118384693;JUN:2.00173007963;CDC5L:1.94338498535;NFIL3:1.91056835058;SMAD1..7,9:1.89453599829;GCM1,2:1.88946564307;MAFB:1.87120069557;TFDP1:1.84835129412;NKX3-2:1.83940028413;GFI1B:1.8307092402;ADNP_IRX_SIX_ZHX:1.77027852825;HOX{A4,D4}:1.75365047109;ZNF423:1.72503062637;KLF4:1.69391165763;XBP1:1.65678798663;RBPJ:1.6560215177;MYOD1:1.6522574009;LMO2:1.58607984959;SOX2:1.58027915511;TGIF1:1.54712047101;FOXM1:1.53687234667;VSX1,2:1.53138256216;NKX2-3_NKX2-5:1.52195339371;RREB1:1.50536383037;POU3F1..4:1.44004016738;NKX6-1,2:1.43355179471;HAND1,2:1.41319269192;IKZF2:1.35648496622;EBF1:1.34454003445;EP300:1.30077453643;NFIX:1.27117303163;ATF4:1.26003643802;SOX17:1.24278207991;FOXL1:1.20362856892;MYBL2:1.15610363632;RORA:1.15192203311;T:1.11616870858;LEF1_TCF7_TCF7L1,2:1.09599021215;ZIC1..3:1.09212297731;ARID5B:1.07857108949;MEF2{A,B,C,D}:1.0717431446;NRF1:1.04089966213;SP1:1.02033408934;ESRRA:1.01651521836;ONECUT1,2:1.01379831118;TFAP2{A,C}:1.00957966646;GATA4:0.99528303477;FOXD3:0.960021264575;GTF2A1,2:0.948472420868;ZEB1:0.932508839927;FOX{F1,F2,J1}:0.896768100292;FOXQ1:0.895194895153;HMX1:0.890631785202;ALX1:0.890028962175;SOX{8,9,10}:0.874082457643;ZNF238:0.87266186287;CREB1:0.865809622614;ATF5_CREB3:0.846979886557;TEF:0.838458701772;AR:0.819383412614;XCPE1{core}:0.76092232384;ZNF384:0.751300671848;FOXP3:0.742840815444;IKZF1:0.679769909586;PAX1,9:0.607129081116;TLX2:0.592149939175;TLX1..3_NFIC{dimer}:0.577450165952;NANOG:0.572213613465;ATF6:0.558964546906;TBX4,5:0.53542747587;HSF1,2:0.50630260617;SREBF1,2:0.421913187494;NR3C1:0.411856601182;TFAP4:0.361293777003;FOXA2:0.342401218485;BPTF:0.330401394212;FOX{D1,D2}:0.329571558665;HOX{A6,A7,B6,B7}:0.32571505127;ZNF143:0.312826628556;TBP:0.291748434659;NFATC1..3:0.286961838389;GFI1:0.274309045921;bHLH_family:0.257448182438;FOXN1:0.236006875998;GZF1:0.233974823018;UFEwm:0.165524823931;PAX2:0.164014734965;STAT2,4,6:0.14520963726;YY1:0.121075540183;NFE2L1:0.101497651597;PAX3,7:0.0745813140975;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0465214593472;PDX1:0.0323862590226;SNAI1..3:0.0277994150484;SPZ1:-0.0149406447666;NFE2L2:-0.0338512851241;FOXP1:-0.0705642346819;ZNF148:-0.0776246690496;SRF:-0.131175447669;STAT1,3:-0.160287495096;NANOG{mouse}:-0.183235315741;LHX3,4:-0.192607944447;NFY{A,B,C}:-0.210073415816;IRF7:-0.236508788059;TFCP2:-0.26863609448;ESR1:-0.274084986168;DMAP1_NCOR{1,2}_SMARC:-0.282872906537;CEBPA,B_DDIT3:-0.353399651005;FOX{I1,J2}:-0.368346121256;PAX4:-0.38227461785;HNF1A:-0.407350191078;GATA6:-0.41123283935;IRF1,2:-0.417023116023;SPI1:-0.432152286954;PBX1:-0.442889657377;TAL1_TCF{3,4,12}:-0.464335503157;FOXO1,3,4:-0.484306198633;TEAD1:-0.502689284503;NFE2:-0.507864750526;NR1H4:-0.528556454998;CDX1,2,4:-0.59740246052;POU1F1:-0.614795509506;FOSL2:-0.714207199738;GLI1..3:-0.740721081404;BACH2:-0.766674398094;SPIB:-0.769766024408;ETS1,2:-0.786007208641;NR5A1,2:-0.789564867605;HES1:-0.801332339979;ZBTB16:-0.822375703685;ALX4:-0.844145549595;NKX2-2,8:-0.880308320487;FOS_FOS{B,L1}_JUN{B,D}:-0.886648058426;HNF4A_NR2F1,2:-0.914432642865;STAT5{A,B}:-0.916898728062;PAX8:-0.9175102336;HLF:-0.917791091153;HIF1A:-0.956841700455;NKX3-1:-0.965437857468;RUNX1..3:-0.966914856398;NFKB1_REL_RELA:-0.994435892128;TP53:-1.05261894226;RXR{A,B,G}:-1.12991778323;POU2F1..3:-1.17573529053;E2F1..5:-1.20739322232;AIRE:-1.24273520276;EVI1:-1.25188654989;ELK1,4_GABP{A,B1}:-1.38370907144;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.39214083528;MYB:-1.40048906114;EN1,2:-1.45002957879;RXRA_VDR{dimer}:-1.56180451241;PPARG:-1.70625450133;NR6A1:-1.71627755973;ELF1,2,4:-1.73209892613;NKX2-1,4:-2.03727012434;PITX1..3:-2.38358880794;HOX{A5,B5}:-2.63856121902;TOPORS:-2.77012117974 | |top_motifs=EGR1..3:3.99735320905;REST:3.84288814956;NHLH1,2:3.60133139598;MTF1:3.49709746857;ZBTB6:3.31412075514;MTE{core}:3.28229042754;MYFfamily:3.27563510648;PAX6:3.14814860949;ATF2:3.09584997157;RFX1:3.08761322366;MED-1{core}:3.04645805316;CRX:3.04386752917;ZFP161:3.02361829265;PRRX1,2:2.92112586042;TFAP2B:2.88082505628;CUX2:2.68117262567;DBP:2.58220919638;MAZ:2.51517539487;GTF2I:2.5103323456;PAX5:2.4673784908;SOX5:2.44958485417;RFX2..5_RFXANK_RFXAP:2.43182928688;HOXA9_MEIS1:2.43030665794;MZF1:2.35609425064;HBP1_HMGB_SSRP1_UBTF:2.32678012716;OCT4_SOX2{dimer}:2.32414012203;POU5F1:2.28556813523;AHR_ARNT_ARNT2:2.22230741293;PRDM1:2.21962675101;HIC1:2.20195897216;BREu{core}:2.13264058509;HMGA1,2:2.09297882869;PATZ1:2.09266758189;POU6F1:2.06118384693;JUN:2.00173007963;CDC5L:1.94338498535;NFIL3:1.91056835058;SMAD1..7,9:1.89453599829;GCM1,2:1.88946564307;MAFB:1.87120069557;TFDP1:1.84835129412;NKX3-2:1.83940028413;GFI1B:1.8307092402;ADNP_IRX_SIX_ZHX:1.77027852825;HOX{A4,D4}:1.75365047109;ZNF423:1.72503062637;KLF4:1.69391165763;XBP1:1.65678798663;RBPJ:1.6560215177;MYOD1:1.6522574009;LMO2:1.58607984959;SOX2:1.58027915511;TGIF1:1.54712047101;FOXM1:1.53687234667;VSX1,2:1.53138256216;NKX2-3_NKX2-5:1.52195339371;RREB1:1.50536383037;POU3F1..4:1.44004016738;NKX6-1,2:1.43355179471;HAND1,2:1.41319269192;IKZF2:1.35648496622;EBF1:1.34454003445;EP300:1.30077453643;NFIX:1.27117303163;ATF4:1.26003643802;SOX17:1.24278207991;FOXL1:1.20362856892;MYBL2:1.15610363632;RORA:1.15192203311;T:1.11616870858;LEF1_TCF7_TCF7L1,2:1.09599021215;ZIC1..3:1.09212297731;ARID5B:1.07857108949;MEF2{A,B,C,D}:1.0717431446;NRF1:1.04089966213;SP1:1.02033408934;ESRRA:1.01651521836;ONECUT1,2:1.01379831118;TFAP2{A,C}:1.00957966646;GATA4:0.99528303477;FOXD3:0.960021264575;GTF2A1,2:0.948472420868;ZEB1:0.932508839927;FOX{F1,F2,J1}:0.896768100292;FOXQ1:0.895194895153;HMX1:0.890631785202;ALX1:0.890028962175;SOX{8,9,10}:0.874082457643;ZNF238:0.87266186287;CREB1:0.865809622614;ATF5_CREB3:0.846979886557;TEF:0.838458701772;AR:0.819383412614;XCPE1{core}:0.76092232384;ZNF384:0.751300671848;FOXP3:0.742840815444;IKZF1:0.679769909586;PAX1,9:0.607129081116;TLX2:0.592149939175;TLX1..3_NFIC{dimer}:0.577450165952;NANOG:0.572213613465;ATF6:0.558964546906;TBX4,5:0.53542747587;HSF1,2:0.50630260617;SREBF1,2:0.421913187494;NR3C1:0.411856601182;TFAP4:0.361293777003;FOXA2:0.342401218485;BPTF:0.330401394212;FOX{D1,D2}:0.329571558665;HOX{A6,A7,B6,B7}:0.32571505127;ZNF143:0.312826628556;TBP:0.291748434659;NFATC1..3:0.286961838389;GFI1:0.274309045921;bHLH_family:0.257448182438;FOXN1:0.236006875998;GZF1:0.233974823018;UFEwm:0.165524823931;PAX2:0.164014734965;STAT2,4,6:0.14520963726;YY1:0.121075540183;NFE2L1:0.101497651597;PAX3,7:0.0745813140975;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0465214593472;PDX1:0.0323862590226;SNAI1..3:0.0277994150484;SPZ1:-0.0149406447666;NFE2L2:-0.0338512851241;FOXP1:-0.0705642346819;ZNF148:-0.0776246690496;SRF:-0.131175447669;STAT1,3:-0.160287495096;NANOG{mouse}:-0.183235315741;LHX3,4:-0.192607944447;NFY{A,B,C}:-0.210073415816;IRF7:-0.236508788059;TFCP2:-0.26863609448;ESR1:-0.274084986168;DMAP1_NCOR{1,2}_SMARC:-0.282872906537;CEBPA,B_DDIT3:-0.353399651005;FOX{I1,J2}:-0.368346121256;PAX4:-0.38227461785;HNF1A:-0.407350191078;GATA6:-0.41123283935;IRF1,2:-0.417023116023;SPI1:-0.432152286954;PBX1:-0.442889657377;TAL1_TCF{3,4,12}:-0.464335503157;FOXO1,3,4:-0.484306198633;TEAD1:-0.502689284503;NFE2:-0.507864750526;NR1H4:-0.528556454998;CDX1,2,4:-0.59740246052;POU1F1:-0.614795509506;FOSL2:-0.714207199738;GLI1..3:-0.740721081404;BACH2:-0.766674398094;SPIB:-0.769766024408;ETS1,2:-0.786007208641;NR5A1,2:-0.789564867605;HES1:-0.801332339979;ZBTB16:-0.822375703685;ALX4:-0.844145549595;NKX2-2,8:-0.880308320487;FOS_FOS{B,L1}_JUN{B,D}:-0.886648058426;HNF4A_NR2F1,2:-0.914432642865;STAT5{A,B}:-0.916898728062;PAX8:-0.9175102336;HLF:-0.917791091153;HIF1A:-0.956841700455;NKX3-1:-0.965437857468;RUNX1..3:-0.966914856398;NFKB1_REL_RELA:-0.994435892128;TP53:-1.05261894226;RXR{A,B,G}:-1.12991778323;POU2F1..3:-1.17573529053;E2F1..5:-1.20739322232;AIRE:-1.24273520276;EVI1:-1.25188654989;ELK1,4_GABP{A,B1}:-1.38370907144;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.39214083528;MYB:-1.40048906114;EN1,2:-1.45002957879;RXRA_VDR{dimer}:-1.56180451241;PPARG:-1.70625450133;NR6A1:-1.71627755973;ELF1,2,4:-1.73209892613;NKX2-1,4:-2.03727012434;PITX1..3:-2.38358880794;HOX{A5,B5}:-2.63856121902;TOPORS:-2.77012117974 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10188-103D8;search_select_hide=table117:FF:10188-103D8 | |||
}} | }} | ||
Latest revision as of 12:26, 3 June 2020
| Name: | cerebral meninges, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12840 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12840
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12840
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0317 |
| 10 | 10 | 0.0241 |
| 100 | 100 | 0.288 |
| 101 | 101 | 0.955 |
| 102 | 102 | 0.901 |
| 103 | 103 | 0.244 |
| 104 | 104 | 0.175 |
| 105 | 105 | 0.171 |
| 106 | 106 | 0.119 |
| 107 | 107 | 0.217 |
| 108 | 108 | 0.871 |
| 109 | 109 | 0.0144 |
| 11 | 11 | 0.0143 |
| 110 | 110 | 0.038 |
| 111 | 111 | 0.0331 |
| 112 | 112 | 0.628 |
| 113 | 113 | 0.85 |
| 114 | 114 | 0.066 |
| 115 | 115 | 0.71 |
| 116 | 116 | 0.285 |
| 117 | 117 | 0.00642 |
| 118 | 118 | 0.0862 |
| 119 | 119 | 0.114 |
| 12 | 12 | 0.705 |
| 120 | 120 | 0.129 |
| 121 | 121 | 0.41 |
| 122 | 122 | 0.575 |
| 123 | 123 | 0.0772 |
| 124 | 124 | 0.19 |
| 125 | 125 | 0.303 |
| 126 | 126 | 0.0728 |
| 127 | 127 | 0.311 |
| 128 | 128 | 0.308 |
| 129 | 129 | 0.488 |
| 13 | 13 | 0.00191 |
| 130 | 130 | 0.611 |
| 131 | 131 | 0.0476 |
| 132 | 132 | 0.84 |
| 133 | 133 | 4.30079e-4 |
| 134 | 134 | 0.405 |
| 135 | 135 | 0.435 |
| 136 | 136 | 0.0549 |
| 137 | 137 | 0.642 |
| 138 | 138 | 0.712 |
| 139 | 139 | 0.141 |
| 14 | 14 | 0.696 |
| 140 | 140 | 0.433 |
| 141 | 141 | 0.364 |
| 142 | 142 | 0.97 |
| 143 | 143 | 0.0298 |
| 144 | 144 | 0.877 |
| 145 | 145 | 0.0655 |
| 146 | 146 | 0.454 |
| 147 | 147 | 0.961 |
| 148 | 148 | 0.117 |
| 149 | 149 | 0.344 |
| 15 | 15 | 0.0726 |
| 150 | 150 | 0.208 |
| 151 | 151 | 0.552 |
| 152 | 152 | 0.182 |
| 153 | 153 | 0.808 |
| 154 | 154 | 0.857 |
| 155 | 155 | 0.242 |
| 156 | 156 | 0.39 |
| 157 | 157 | 0.555 |
| 158 | 158 | 0.305 |
| 159 | 159 | 0.809 |
| 16 | 16 | 0.105 |
| 160 | 160 | 0.21 |
| 161 | 161 | 0.178 |
| 162 | 162 | 0.986 |
| 163 | 163 | 0.896 |
| 164 | 164 | 0.0166 |
| 165 | 165 | 0.0735 |
| 166 | 166 | 0.763 |
| 167 | 167 | 0.227 |
| 168 | 168 | 0.533 |
| 169 | 169 | 0.0071 |
| 17 | 17 | 0.182 |
| 18 | 18 | 0.315 |
| 19 | 19 | 0.211 |
| 2 | 2 | 0.98 |
| 20 | 20 | 0.101 |
| 21 | 21 | 0.0404 |
| 22 | 22 | 0.24 |
| 23 | 23 | 0.505 |
| 24 | 24 | 0.103 |
| 25 | 25 | 0.514 |
| 26 | 26 | 6.89302e-5 |
| 27 | 27 | 0.977 |
| 28 | 28 | 0.633 |
| 29 | 29 | 0.0107 |
| 3 | 3 | 0.0193 |
| 30 | 30 | 0.39 |
| 31 | 31 | 0.891 |
| 32 | 32 | 0.08 |
| 33 | 33 | 0.0856 |
| 34 | 34 | 0.744 |
| 35 | 35 | 0.495 |
| 36 | 36 | 0.048 |
| 37 | 37 | 0.0413 |
| 38 | 38 | 0.286 |
| 39 | 39 | 0.371 |
| 4 | 4 | 0.613 |
| 40 | 40 | 0.0231 |
| 41 | 41 | 0.472 |
| 42 | 42 | 0.136 |
| 43 | 43 | 0.0969 |
| 44 | 44 | 0.239 |
| 45 | 45 | 0.877 |
| 46 | 46 | 0.0626 |
| 47 | 47 | 0.0332 |
| 48 | 48 | 0.0309 |
| 49 | 49 | 0.0869 |
| 5 | 5 | 0.316 |
| 50 | 50 | 0.349 |
| 51 | 51 | 0.494 |
| 52 | 52 | 0.775 |
| 53 | 53 | 0.676 |
| 54 | 54 | 0.376 |
| 55 | 55 | 0.354 |
| 56 | 56 | 0.416 |
| 57 | 57 | 0.176 |
| 58 | 58 | 0.338 |
| 59 | 59 | 0.195 |
| 6 | 6 | 0.599 |
| 60 | 60 | 0.127 |
| 61 | 61 | 0.0516 |
| 62 | 62 | 0.202 |
| 63 | 63 | 0.131 |
| 64 | 64 | 0.22 |
| 65 | 65 | 0.298 |
| 66 | 66 | 0.21 |
| 67 | 67 | 0.279 |
| 68 | 68 | 0.134 |
| 69 | 69 | 0.479 |
| 7 | 7 | 0.0596 |
| 70 | 70 | 0.0264 |
| 71 | 71 | 0.00867 |
| 72 | 72 | 0.535 |
| 73 | 73 | 0.0512 |
| 74 | 74 | 0.944 |
| 75 | 75 | 0.0228 |
| 76 | 76 | 0.323 |
| 77 | 77 | 0.328 |
| 78 | 78 | 0.00179 |
| 79 | 79 | 0.1 |
| 8 | 8 | 0.0838 |
| 80 | 80 | 0.923 |
| 81 | 81 | 0.621 |
| 82 | 82 | 0.546 |
| 83 | 83 | 0.383 |
| 84 | 84 | 0.766 |
| 85 | 85 | 0.31 |
| 86 | 86 | 0.231 |
| 87 | 87 | 0.031 |
| 88 | 88 | 0.849 |
| 89 | 89 | 0.686 |
| 9 | 9 | 0.657 |
| 90 | 90 | 0.047 |
| 91 | 91 | 0.337 |
| 92 | 92 | 0.459 |
| 93 | 93 | 0.788 |
| 94 | 94 | 0.0511 |
| 95 | 95 | 0.0329 |
| 96 | 96 | 0.689 |
| 97 | 97 | 0.866 |
| 98 | 98 | 0.272 |
| 99 | 99 | 0.677 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12840
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002360 (meninx)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000094 (membrane organ)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0010743 (meningeal cluster)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010188 (human cerebral meninges - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)
