FF:10766-110F1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004724 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX007854;DRR008726;DRZ000151;DRZ001536;DRZ011501;DRZ012886 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692,DOID:8552 | |ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692,DOID:8552 | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101035,FF:0100740 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr3:128212033..128212051,-!p1@GATA2!2.64!432.15!GATA2;;chrX:48644984..48645005,+!p1@GATA1!2.27!184.33!GATA1;;chr12:54694758..54694805,-!p1@NFE2!2.21!193.80!NFE2;;chr6:135502501..135502546,+!p1@MYB!2.21!191.64!MYB;;chr19:12998003..12998021,-!p1@KLF1!2.06!115.02!KLF1;;chr12:54694807..54694832,-!p3@NFE2!1.99!95.90!NFE2;;chr9:135854091..135854159,+!p1@GFI1B!1.94!86.76!GFI1B;;chr3:128206762..128206781,-!p2@GATA2!1.81!378.63!GATA2;;chr19:13213511..13213545,-!p2@LYL1!1.78!63.49!LYL1;;chr6:135502408..135502459,+!p2@MYB!1.70!56.35!MYB;;chr5:134369905..134369972,-!p1@PITX1!1.55!52.52!PITX1;;chr21:39870339..39870443,-!p1@ERG!1.55!34.41!ERG;;chr6:135502472..135502489,+!p3@MYB!1.54!33.74!MYB;;chr12:54785074..54785122,-!p2@ZNF385A!1.53!50.36!ZNF385A;;chr5:134369879..134369898,-!p2@PITX1!1.50!30.42!PITX1;;chr10:94449703..94449718,+!p1@HHEX!1.46!104.38!HHEX;;chr11:47400045..47400060,-!p6@SPI1!1.42!25.43!SPI1;;chr9:20382446..20382493,-!p4@MLLT3!1.41!24.43!MLLT3;;chr7:50344289..50344323,+!p1@IKZF1!1.39!23.27!IKZF1;;chr12:54785054..54785072,-!p4@ZNF385A!1.38!26.26!ZNF385A;;chr11:47400078..47400106,-!p1@SPI1!1.38!23.10!SPI1;;chr11:47399996..47400014,-!p4@SPI1!1.38!22.94!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.36!21.94!SPI1;;chr7:137620650..137620677,-!p3@CREB3L2!1.33!20.28!CREB3L2;;chr19:13213399..13213414,-!p6@LYL1!1.30!18.95!LYL1;;chr20:50159198..50159299,-!p1@NFATC2!1.29!27.09!NFATC2;;chr1:47695003..47695042,-!p2@TAL1!1.27!17.62!TAL1;;chr17:40441354..40441410,+!p2@STAT5A!1.27!17.62!STAT5A;;chr11:47400032..47400043,-!p5@SPI1!1.26!17.29!SPI1;;chr8:37963466..37963506,+!p3@ASH2L!1.25!21.11!ASH2L;;chr12:54689532..54689551,-!p4@NFE2!1.25!16.79!NFE2;;chr1:47691303..47691319,-!p5@TAL1!1.24!16.45!TAL1;;chr7:137620684..137620711,-!p4@CREB3L2!1.24!16.29!CREB3L2;;chr2:68592406..68592424,+!p1@PLEK!1.23!15.79!PLEK;;chrY:21906594..21906622,-!p1@KDM5D!1.22!15.62!KDM5D;;chr12:54694653..54694672,-!p2@NFE2!1.22!15.62!NFE2;;chr19:13213555..13213568,-!p5@LYL1!1.21!15.29!LYL1;;chr1:47697881..47697910,-!p4@TAL1!1.21!15.13!TAL1;;chr19:33793430..33793447,-!p1@CEBPA!1.17!57.34!CEBPA;;chr4:109089095..109089144,-!p6@LEF1!1.13!12.63!LEF1;;chr21:36421535..36421610,-!p2@RUNX1!1.12!43.22!RUNX1;;chr10:94449675..94449694,+!p2@HHEX!1.12!32.74!HHEX;;chrX:48644976..48644983,+!p2@GATA1!1.12!12.13!GATA1;;chr7:50344251..50344288,+!p3@IKZF1!1.11!11.97!IKZF1;;chr4:109088940..109089037,-!p4@LEF1!1.10!11.47!LEF1;;chr2:145277640..145277771,-!p1@ZEB2!1.08!147.76!ZEB2;;chr7:63505799..63505904,+!p1@ZNF727!1.08!11.14!ZNF727;;chr19:22817119..22817145,+!p1@ZNF492!1.07!17.95!ZNF492;;chr6:144385698..144385742,-!p2@PLAGL1!1.07!12.96!PLAGL1;;chr7:115670804..115670825,-!p1@TFEC!1.05!10.14!TFEC;;chr19:13213465..13213478,-!p7@LYL1!1.04!9.97!LYL1;;chr8:60031619..60031676,-!p1@TOX!1.03!21.28!TOX;;chr17:38020392..38020477,-!p1@IKZF3!1.03!9.64!IKZF3;;chr7:50343634..50343717,+!p2@IKZF1!1.02!9.47!IKZF1;;chr17:40440481..40440550,+!p1@STAT5A!1.01!68.31!STAT5A;;chr18:22932080..22932170,-!p1@ZNF521!1.00!39.39!ZNF521;;chrX:48645010..48645015,+!p3@GATA1!0.99!8.81!GATA1;;chr5:88178983..88179012,-!p1@MEF2C!0.97!65.82!MEF2C;;chr8:28748099..28748141,+!p2@HMBOX1!0.97!26.43!HMBOX1;;chr1:47697539..47697573,-!p3@TAL1!0.95!7.98!TAL1;;chr2:214013461..214013517,-!p6@IKZF2!0.95!7.81!IKZF2;;chr13:41593425..41593480,-!p1@ELF1!0.94!50.53!ELF1;;chr12:54691711..54691725,-!p7@NFE2!0.90!6.98!NFE2;;chr1:61548069..61548102,+!p3@NFIA!0.89!16.95!NFIA;;chr6:135513595..135513617,+!p4@MYB!0.89!6.81!MYB;;chr12:54689552..54689574,-!p6@NFE2!0.88!6.65!NFE2;;chr9:135854074..135854089,+!p2@GFI1B!0.88!6.65!GFI1B;;chr20:61051039..61051057,-!p1@GATA5!0.88!6.65!GATA5;;chr3:141747459..141747475,-!p1@TFDP2!0.87!56.01!TFDP2;;chr1:92951607..92951661,-!p1@GFI1!0.87!6.48!GFI1;;chr12:54694738..54694749,-!p5@NFE2!0.86!6.32!NFE2;;chr4:87857474..87857489,+!p7@AFF1!0.85!10.97!AFF1;;chr11:32457103..32457123,-!p3@WT1!0.85!6.15!WT1;;chr8:145669791..145669834,-!p1@TONSL!0.84!17.78!TONSL;;chr3:157823517..157823562,-!p1@SHOX2!0.83!6.15!SHOX2;;chr1:61548225..61548299,+!p1@NFIA!0.82!78.78!NFIA;;chr4:4291837..4291859,-!p2@LYAR!0.82!19.28!LYAR;;chr3:63953435..63953499,+!p1@ATXN7!0.82!5.65!ATXN7;;chr5:88179017..88179046,-!p2@MEF2C!0.81!23.60!MEF2C;;chr19:11959532..11959593,+!p1@ZNF439!0.81!22.60!ZNF439;;chr8:28748157..28748175,+!p3@HMBOX1!0.81!6.81!HMBOX1;;chr19:57183114..57183145,-!p1@ZNF835!0.81!6.15!ZNF835;;chr7:35293685..35293718,-!p1@TBX20!0.81!5.48!TBX20;;chr8:128748308..128748324,+!p2@MYC!0.80!158.57!MYC;;chr6:7107999..7108031,+!p2@RREB1!0.80!30.42!RREB1;;chr6:15246200..15246214,+!p2@JARID2!0.79!15.13!JARID2;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.78!11.63!SOHLH2;;chr14:75988771..75988826,+!p1@BATF!0.78!6.81!BATF;;chr11:47399920..47399931,-!p7@SPI1!0.78!4.99!SPI1;;chr6:144329384..144329405,-!p1@PLAGL1!0.76!60.67!PLAGL1;;chr11:130184311..130184362,-!p4@ZBTB44!0.76!8.98!ZBTB44;;chr15:96875657..96875760,+!p14@NR2F2!0.76!8.31!NR2F2;;chr12:54778471..54778528,-!p1@ZNF385A!0.76!4.82!ZNF38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| |expression_enrichment_score=chr3:128212033..128212051,-!p1@GATA2!2.64!432.15!GATA2;;chrX:48644984..48645005,+!p1@GATA1!2.27!184.33!GATA1;;chr12:54694758..54694805,-!p1@NFE2!2.21!193.80!NFE2;;chr6:135502501..135502546,+!p1@MYB!2.21!191.64!MYB;;chr19:12998003..12998021,-!p1@KLF1!2.06!115.02!KLF1;;chr12:54694807..54694832,-!p3@NFE2!1.99!95.90!NFE2;;chr9:135854091..135854159,+!p1@GFI1B!1.94!86.76!GFI1B;;chr3:128206762..128206781,-!p2@GATA2!1.81!378.63!GATA2;;chr19:13213511..13213545,-!p2@LYL1!1.78!63.49!LYL1;;chr6:135502408..135502459,+!p2@MYB!1.70!56.35!MYB;;chr5:134369905..134369972,-!p1@PITX1!1.55!52.52!PITX1;;chr21:39870339..39870443,-!p1@ERG!1.55!34.41!ERG;;chr6:135502472..135502489,+!p3@MYB!1.54!33.74!MYB;;chr12:54785074..54785122,-!p2@ZNF385A!1.53!50.36!ZNF385A;;chr5:134369879..134369898,-!p2@PITX1!1.50!30.42!PITX1;;chr10:94449703..94449718,+!p1@HHEX!1.46!104.38!HHEX;;chr11:47400045..47400060,-!p6@SPI1!1.42!25.43!SPI1;;chr9:20382446..20382493,-!p4@MLLT3!1.41!24.43!MLLT3;;chr7:50344289..50344323,+!p1@IKZF1!1.39!23.27!IKZF1;;chr12:54785054..54785072,-!p4@ZNF385A!1.38!26.26!ZNF385A;;chr11:47400078..47400106,-!p1@SPI1!1.38!23.10!SPI1;;chr11:47399996..47400014,-!p4@SPI1!1.38!22.94!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.36!21.94!SPI1;;chr7:137620650..137620677,-!p3@CREB3L2!1.33!20.28!CREB3L2;;chr19:13213399..13213414,-!p6@LYL1!1.30!18.95!LYL1;;chr20:50159198..50159299,-!p1@NFATC2!1.29!27.09!NFATC2;;chr1:47695003..47695042,-!p2@TAL1!1.27!17.62!TAL1;;chr17:40441354..40441410,+!p2@STAT5A!1.27!17.62!STAT5A;;chr11:47400032..47400043,-!p5@SPI1!1.26!17.29!SPI1;;chr8:37963466..37963506,+!p3@ASH2L!1.25!21.11!ASH2L;;chr12:54689532..54689551,-!p4@NFE2!1.25!16.79!NFE2;;chr1:47691303..47691319,-!p5@TAL1!1.24!16.45!TAL1;;chr7:137620684..137620711,-!p4@CREB3L2!1.24!16.29!CREB3L2;;chr2:68592406..68592424,+!p1@PLEK!1.23!15.79!PLEK;;chrY:21906594..21906622,-!p1@KDM5D!1.22!15.62!KDM5D;;chr12:54694653..54694672,-!p2@NFE2!1.22!15.62!NFE2;;chr19:13213555..13213568,-!p5@LYL1!1.21!15.29!LYL1;;chr1:47697881..47697910,-!p4@TAL1!1.21!15.13!TAL1;;chr19:33793430..33793447,-!p1@CEBPA!1.17!57.34!CEBPA;;chr4:109089095..109089144,-!p6@LEF1!1.13!12.63!LEF1;;chr21:36421535..36421610,-!p2@RUNX1!1.12!43.22!RUNX1;;chr10:94449675..94449694,+!p2@HHEX!1.12!32.74!HHEX;;chrX:48644976..48644983,+!p2@GATA1!1.12!12.13!GATA1;;chr7:50344251..50344288,+!p3@IKZF1!1.11!11.97!IKZF1;;chr4:109088940..109089037,-!p4@LEF1!1.10!11.47!LEF1;;chr2:145277640..145277771,-!p1@ZEB2!1.08!147.76!ZEB2;;chr7:63505799..63505904,+!p1@ZNF727!1.08!11.14!ZNF727;;chr19:22817119..22817145,+!p1@ZNF492!1.07!17.95!ZNF492;;chr6:144385698..144385742,-!p2@PLAGL1!1.07!12.96!PLAGL1;;chr7:115670804..115670825,-!p1@TFEC!1.05!10.14!TFEC;;chr19:13213465..13213478,-!p7@LYL1!1.04!9.97!LYL1;;chr8:60031619..60031676,-!p1@TOX!1.03!21.28!TOX;;chr17:38020392..38020477,-!p1@IKZF3!1.03!9.64!IKZF3;;chr7:50343634..50343717,+!p2@IKZF1!1.02!9.47!IKZF1;;chr17:40440481..40440550,+!p1@STAT5A!1.01!68.31!STAT5A;;chr18:22932080..22932170,-!p1@ZNF521!1.00!39.39!ZNF521;;chrX:48645010..48645015,+!p3@GATA1!0.99!8.81!GATA1;;chr5:88178983..88179012,-!p1@MEF2C!0.97!65.82!MEF2C;;chr8:28748099..28748141,+!p2@HMBOX1!0.97!26.43!HMBOX1;;chr1:47697539..47697573,-!p3@TAL1!0.95!7.98!TAL1;;chr2:214013461..214013517,-!p6@IKZF2!0.95!7.81!IKZF2;;chr13:41593425..41593480,-!p1@ELF1!0.94!50.53!ELF1;;chr12:54691711..54691725,-!p7@NFE2!0.90!6.98!NFE2;;chr1:61548069..61548102,+!p3@NFIA!0.89!16.95!NFIA;;chr6:135513595..135513617,+!p4@MYB!0.89!6.81!MYB;;chr12:54689552..54689574,-!p6@NFE2!0.88!6.65!NFE2;;chr9:135854074..135854089,+!p2@GFI1B!0.88!6.65!GFI1B;;chr20:61051039..61051057,-!p1@GATA5!0.88!6.65!GATA5;;chr3:141747459..141747475,-!p1@TFDP2!0.87!56.01!TFDP2;;chr1:92951607..92951661,-!p1@GFI1!0.87!6.48!GFI1;;chr12:54694738..54694749,-!p5@NFE2!0.86!6.32!NFE2;;chr4:87857474..87857489,+!p7@AFF1!0.85!10.97!AFF1;;chr11:32457103..32457123,-!p3@WT1!0.85!6.15!WT1;;chr8:145669791..145669834,-!p1@TONSL!0.84!17.78!TONSL;;chr3:157823517..157823562,-!p1@SHOX2!0.83!6.15!SHOX2;;chr1:61548225..61548299,+!p1@NFIA!0.82!78.78!NFIA;;chr4:4291837..4291859,-!p2@LYAR!0.82!19.28!LYAR;;chr3:63953435..63953499,+!p1@ATXN7!0.82!5.65!ATXN7;;chr5:88179017..88179046,-!p2@MEF2C!0.81!23.60!MEF2C;;chr19:11959532..11959593,+!p1@ZNF439!0.81!22.60!ZNF439;;chr8:28748157..28748175,+!p3@HMBOX1!0.81!6.81!HMBOX1;;chr19:57183114..57183145,-!p1@ZNF835!0.81!6.15!ZNF835;;chr7:35293685..35293718,-!p1@TBX20!0.81!5.48!TBX20;;chr8:128748308..128748324,+!p2@MYC!0.80!158.57!MYC;;chr6:7107999..7108031,+!p2@RREB1!0.80!30.42!RREB1;;chr6:15246200..15246214,+!p2@JARID2!0.79!15.13!JARID2;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.78!11.63!SOHLH2;;chr14:75988771..75988826,+!p1@BATF!0.78!6.81!BATF;;chr11:47399920..47399931,-!p7@SPI1!0.78!4.99!SPI1;;chr6:144329384..144329405,-!p1@PLAGL1!0.76!60.67!PLAGL1;;chr11:130184311..130184362,-!p4@ZBTB44!0.76!8.98!ZBTB44;;chr15:96875657..96875760,+!p14@NR2F2!0.76!8.31!NR2F2;;chr12:54778471..54778528,-!p1@ZNF385A!0.76!4.82!ZNF385A;;chr4:87928413..87928433,+!p3@AFF1!0.75!31.75!AFF1;;chrX:131623044..131623089,-!p1@MBNL3!0.75!21.11!MBNL3;;chr15:67391010..67391046,+!p13@SMAD3!0.75!4.65!SMAD3;;chr4:109089290..109089320,-!p14@LEF1!0.75!4.65!LEF1;;chr11:62369108..62369183,-!p3@MTA2!0.73!62.99!MTA2;;chr16:68119324..68119364,+!p1@NFATC3!0.73!21.61!NFATC3;;chr4:87857433..87857472,+!p9@AFF1!0.73!8.31!AFF1;;chr4:87857491..87857519,+!p10@AFF1!0.73!6.32!AFF1;;chr12:54691726..54691738,-!p9@NFE2!0.73!4.32!NFE2;;chr19:11998584..11998649,+!p1@ZNF69!0.72!20.94!ZNF69;;chr6:20402102..20402152,+!p1@E2F3!0.72!19.11!E2F3;;chr19:12203100..12203132,+!p1@ZNF788!0.72!9.31!ZNF788;;chr6:126240463..126240489,+!p6@NCOA7!0.72!4.82!NCOA7;;chr16:88519669..88519726,+!p1@ZFPM1!0.71!42.38!ZFPM1;;chr3:128207349..128207386,-!p3@GATA2!0.71!4.16!GATA2;;chr3:141747950..141748004,-!p7@TFDP2!0.71!4.16!TFDP2;;chr19:45579725..45579743,-!p1@ZNF296!0.70!20.11!ZNF296;;chr8:65493017..65493035,+!p4@BHLHE22!0.70!3.99!BHLHE22;;chr19:13213662..13213686,-!p1@LYL1!0.69!6.15!LYL1;;chr19:21950332..21950356,-!p2@ZNF100!0.68!8.81!ZNF100;;chr8:60031809..60031835,-!p4@TOX!0.68!4.99!TOX;;chr2:60781201..60781258,-!p3@BCL11A!0.68!3.82!BCL11A;;chr17:40440446..40440464,+!p5@STAT5A!0.68!3.82!STAT5A;;chr11:32457075..32457095,-!p1@WT1!0.68!3.82!WT1;;chr21:30671690..30671762,+!p2@BACH1!0.67!14.13!BACH1;;chr11:130184470..130184533,-!p2@ZBTB44!0.67!11.14!ZBTB44;;chr6:15401104..15401166,+!p5@JARID2!0.67!3.66!JARID2;;chrY:2803415..2803468,+!p1@ZFY!0.67!3.66!ZFY;;chr4:109088130..109088163,-!p13@LEF1!0.67!3.66!LEF1;;chr8:128748470..128748487,+!p1@MYC!0.66!460.74!MYC;;chr6:134274354..134274371,+!p1@TBPL1!0.66!111.03!TBPL1;;chr20:42295713..42295738,+!p2@MYBL2!0.66!24.27!MYBL2;;chr16:68119440..68119480,+!p4@NFATC3!0.66!6.32!NFATC3;;chr17:40428359..40428462,-!p1@STAT5B!0.65!51.53!STAT5B;;chr3:69788576..69788648,+!p1@MITF!0.65!21.44!MITF;;chr19:20011744..20011770,+!p1@ZNF93!0.65!15.29!ZNF93;;chr6:144329500..144329526,-!p4@PLAGL1!0.65!8.98!PLAGL1;;chr8:60031682..60031710,-!p2@TOX!0.65!5.98!TOX;;chr8:65492915..65492932,+!p1@BHLHE22!0.65!3.49!BHLHE22;;chr19:13213496..13213501,-!p10@LYL1!0.65!3.49!LYL1;;chr11:47400062..47400077,-!p2@SPI1!0.65!3.49!SPI1;;chr1:47696918..47696935,-!p6@TAL1!0.65!3.49!TAL1;;chr21:36260980..36261011,-!p1@RUNX1!0.64!114.35!RUNX1;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.64!17.62!TAL1;;chr15:41913690..41913753,+!p2@MGA!0.64!8.98!MGA;;chr2:185463247..185463263,+!p1@ZNF804A!0.64!6.48!ZNF804A;;chr8:60031762..60031803,-!p3@TOX!0.64!5.15!TOX;;chr17:46622205..46622218,-!p3@HOXB2!0.64!3.99!HOXB2;;chr2:43453734..43453751,-!p1@ZFP36L2!0.63!413.87!ZFP36L2;;chr1:202777535..202777556,-!p1@KDM5B!0.63!129.48!KDM5B;;chr19:23433144..23433204,-!p1@ZNF724P!0.63!17.12!ZNF724P;;chr7:128577972..128578047,+!p1@IRF5!0.63!5.48!IRF5;;chr16:88519743..88519754,+!p2@ZFPM1!0.63!3.66!ZFPM1;;chr21:40177892..40177903,+!p2@ETS2!0.62!14.79!ETS2;;chr4:109089901..109089930,-!p3@LEF1!0.62!3.16!LEF1;;chr5:88180342..88180365,-!p10@MEF2C!0.62!3.16!MEF2C;;chr11:128563948..128564003,+!p1@FLI1!0.61!44.05!FLI1;;chr12:57504975..57505019,-!p2@STAT6!0.61!14.79!STAT6;;chr19:52956798..52956843,+!p1@ZNF578!0.61!6.81!ZNF578;;chr20:62462566..62462631,-!p1@ZBTB46!0.61!6.48!ZBTB46;;chr3:44626446..44626477,+!p1@ZNF660!0.61!6.15!ZNF660;;chr11:65686952..65686975,+!p5@DRAP1!0.60!19.78!DRAP1;;chr2:60780753..60780800,-!p1@BCL11A!0.60!17.45!BCL11A;;chr21:36262032..36262062,-!p5@RUNX1!0.60!8.98!RUNX1;;chr2:192015701..192015743,-!p1@STAT4!0.60!4.32!STAT4;;chr11:19262486..19262512,-!p4@E2F8!0.60!3.82!E2F8;;chr2:68592394..68592405,+!p2@PLEK!0.60!2.99!PLEK;;chr20:42295745..42295765,+!p1@MYBL2!0.59!58.17!MYBL2;;chr12:11802547..11802560,+!p5@ETV6!0.59!4.32!ETV6;;chr6:85473156..85473210,-!p2@TBX18!0.59!3.66!TBX18;;chr19:45579762..45579772,-!p2@ZNF296!0.59!3.32!ZNF296;;chr6:157099198..157099221,+!p3@ARID1B!0.58!10.80!ARID1B;;chr7:27135591..27135658,-!p1@HOXA1!0.58!5.98!HOXA1;;chr6:144329531..144329546,-!p5@PLAGL1!0.58!4.82!PLAGL1;;chrX:84499081..84499115,+!p2@ZNF711!0.58!4.49!ZNF711;;chr11:19263160..19263176,-!p1@E2F8!0.58!3.49!E2F8;;chr12:54778351..54778378,-!p6@ZNF385A!0.58!2.83!ZNF385A;;chr2:185463521..185463557,+!p3@ZNF804A!0.58!2.83!ZNF804A;;chr2:214014959..214015006,-!p4@IKZF2!0.58!2.83!IKZF2;;chr2:242556900..242556916,-!p6@THAP4!0.58!2.83!THAP4;;chr9:135854058..135854072,+!p3@GFI1B!0.58!2.83!GFI1B;;chr6:15246261..15246312,+!p1@JARID2!0.57!82.77!JARID2;;chr2:239148671..239148686,-!p1@HES6!0.57!11.97!HES6;;chr6:144289132..144289134,-!p3@PLAGL1!0.57!7.31!PLAGL1;;chr10:94449649..94449664,+!p3@HHEX!0.57!4.32!HHEX;;chr1:27022164..27022220,+!p2@ARID1A!0.56!23.93!ARID1A;;chr19:47538560..47538591,+!p2@NPAS1!0.56!2.66!NPAS1;;chr11:19262421..19262455,-!p3@E2F8!0.56!2.66!E2F8;;chr8:37963511..37963523,+!p4@ASH2L!0.56!2.66!ASH2L;;chrY:21906761..21906810,-!p2@KDM5D!0.56!2.66!KDM5D;;chr1:226595741..226595818,-!p1@PARP1!0.55!166.21!PARP1;;chr11:65687362..65687436,+!p3@DRAP1!0.55!14.29!DRAP1;;chr15:37390850..37390909,-!p3@MEIS2!0.55!5.65!MEIS2;;chr6:126240442..126240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| ||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |||
|fonse_cell_line=FF:0101035 | |fonse_cell_line=FF:0101035 | ||
|fonse_cell_line_closure=FF:0101035 | |fonse_cell_line_closure=FF:0101035 | ||
| Line 36: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520%2528CML%2529%2520cell%2520line%253aMEG-A2.CNhs11865.10766-110F1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520%2528CML%2529%2520cell%2520line%253aMEG-A2.CNhs11865.10766-110F1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520%2528CML%2529%2520cell%2520line%253aMEG-A2.CNhs11865.10766-110F1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520%2528CML%2529%2520cell%2520line%253aMEG-A2.CNhs11865.10766-110F1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/chronic%2520myelogenous%2520leukemia%2520%2528CML%2529%2520cell%2520line%253aMEG-A2.CNhs11865.10766-110F1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10766-110F1 | |id=FF:10766-110F1 | ||
|is_a=DOID:8552;;EFO:0002091;;FF:0000210;;FF:0100740 | |is_a=DOID:8552;;EFO:0002091;;FF:0000210;;FF:0100740 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11865 | |||
|library_id_phase_based=2:CNhs11865 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10766 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10766 | |||
|name=chronic myelogenous leukemia (CML) cell line:MEG-A2 | |name=chronic myelogenous leukemia (CML) cell line:MEG-A2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 44: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11865,LSID830,release010,COMPLETED | |profile_hcage=CNhs11865,LSID830,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=110 | |rna_box=110 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 59: | Line 78: | ||
|rna_weight_ug=31.9842 | |rna_weight_ug=31.9842 | ||
|sample_age=20 | |sample_age=20 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=ifo50478 | |sample_cell_catalog=ifo50478 | ||
|sample_cell_line=MEG-A2 | |sample_cell_line=MEG-A2 | ||
| Line 80: | Line 100: | ||
|top_motifs=GATA6:4.17008204007;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.11985678087;MYB:1.8229187037;STAT5{A,B}:1.3485278103;ALX1:1.23365072813;IKZF2:1.1833228366;E2F1..5:1.1404376186;NR5A1,2:1.09104721728;BREu{core}:1.08418574388;ELF1,2,4:1.00925362292;NR6A1:1.00417466035;PAX6:0.965771252341;CRX:0.950687652493;bHLH_family:0.901762542753;PITX1..3:0.893101520166;YY1:0.890751223367;HOXA9_MEIS1:0.83146512954;PPARG:0.825172925548;POU3F1..4:0.81591769758;RORA:0.799328233738;ZNF143:0.778639436352;ZNF148:0.746208288411;EN1,2:0.740655917451;FOX{I1,J2}:0.739629718269;ELK1,4_GABP{A,B1}:0.735761971361;STAT1,3:0.733781937881;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.713435361619;CUX2:0.657750030999;POU2F1..3:0.654127298104;TLX2:0.642480551395;SPIB:0.639925784554;PAX8:0.599874306156;ZBTB16:0.596779010562;TOPORS:0.569358070754;PBX1:0.551987996454;SPI1:0.531111245927;RUNX1..3:0.464159473392;OCT4_SOX2{dimer}:0.420091969446;ETS1,2:0.4022903416;RBPJ:0.391642665344;PRRX1,2:0.371766385087;POU1F1:0.37039609928;NFY{A,B,C}:0.360961355022;NANOG{mouse}:0.358382841743;HES1:0.352842432834;HAND1,2:0.347030275771;SOX{8,9,10}:0.340002609232;HOX{A6,A7,B6,B7}:0.329783663568;FOXP1:0.295420471598;POU6F1:0.259346112191;TFDP1:0.232455966168;ONECUT1,2:0.22772545984;EVI1:0.226181447259;DMAP1_NCOR{1,2}_SMARC:0.215036304484;AR:0.205314575373;PAX4:0.188755375865;NKX2-3_NKX2-5:0.124551303494;NRF1:0.112993994541;HBP1_HMGB_SSRP1_UBTF:0.108790339798;FOXP3:0.0978834142508;NKX2-1,4:0.0808062399783;NANOG:0.0687734739105;PAX3,7:0.0662871089819;SMAD1..7,9:0.0660631330437;TEF:0.0528653115693;ADNP_IRX_SIX_ZHX:0.0129342631123;HNF4A_NR2F1,2:-0.0158433775217;GCM1,2:-0.015903064967;HOX{A5,B5}:-0.0282114708134;FOXN1:-0.0416884716618;T:-0.0565625622892;NKX3-1:-0.0744377138446;AIRE:-0.0758475051455;ZFP161:-0.085724248341;SOX17:-0.0935918374209;SNAI1..3:-0.0973873094046;REST:-0.104307817642;NKX2-2,8:-0.115206731583;AHR_ARNT_ARNT2:-0.122736552986;NHLH1,2:-0.130942090443;MTF1:-0.135615197408;ARID5B:-0.169820906053;CDX1,2,4:-0.177802093314;POU5F1:-0.180066676891;NFKB1_REL_RELA:-0.186413328532;FOXQ1:-0.204231007463;PAX2:-0.205454792895;NFIX:-0.207905991706;RXR{A,B,G}:-0.219495244138;GZF1:-0.239170469863;LHX3,4:-0.246863084892;BPTF:-0.248524044166;MYOD1:-0.252345833791;ZEB1:-0.263817019503;HNF1A:-0.271616090151;TGIF1:-0.290244273285;ATF5_CREB3:-0.295353606129;XBP1:-0.298356667212;RXRA_VDR{dimer}:-0.302067776835;FOXM1:-0.310132540408;ZNF423:-0.317482966966;FOX{F1,F2,J1}:-0.318337424439;NFE2:-0.326260354293;NKX6-1,2:-0.327455176944;DBP:-0.332808310058;KLF4:-0.336795561653;ZNF384:-0.355158142999;SREBF1,2:-0.376041298048;HIF1A:-0.415300799414;NR1H4:-0.42343840308;VSX1,2:-0.441926067205;TFAP4:-0.450362456071;RFX2..5_RFXANK_RFXAP:-0.456441592357;HSF1,2:-0.45678667255;TFAP2{A,C}:-0.470876930399;CREB1:-0.475812134975;HOX{A4,D4}:-0.495341119867;FOXD3:-0.507589551409;NFIL3:-0.507899477935;IRF1,2:-0.507901719326;SOX5:-0.514852161168;STAT2,4,6:-0.533487534411;ZBTB6:-0.565673517939;PDX1:-0.570848202687;BACH2:-0.572843184925;TFAP2B:-0.580989844182;EGR1..3:-0.58396181601;NFE2L1:-0.618460815642;FOS_FOS{B,L1}_JUN{B,D}:-0.619888877399;MED-1{core}:-0.630764014512;MYBL2:-0.644423150302;MEF2{A,B,C,D}:-0.651759458001;ATF4:-0.657344269118;FOXA2:-0.662185042001;ESR1:-0.669375225616;MYFfamily:-0.671418825629;MTE{core}:-0.685203081295;UFEwm:-0.685331875697;IRF7:-0.690108087302;GTF2I:-0.697175159655;CDC5L:-0.6983559116;SRF:-0.710974336342;HIC1:-0.723207187603;GFI1:-0.729478386922;NKX3-2:-0.73238514344;LEF1_TCF7_TCF7L1,2:-0.74154383171;TBX4,5:-0.766875889781;EBF1:-0.76713577769;HLF:-0.781457753325;NFE2L2:-0.806907397277;XCPE1{core}:-0.812020817978;CEBPA,B_DDIT3:-0.814769726589;FOSL2:-0.825951912995;HMGA1,2:-0.826435039764;GLI1..3:-0.831632090337;ESRRA:-0.841217237677;RREB1:-0.844191963421;RFX1:-0.856098007956;HMX1:-0.86217214087;IKZF1:-0.87132436389;PAX1,9:-0.874832039592;MZF1:-0.895483548983;EP300:-0.900581541622;FOXO1,3,4:-0.916407580159;FOX{D1,D2}:-0.938278065473;ZNF238:-0.938500782657;GTF2A1,2:-0.938747252679;LMO2:-0.948288473254;PAX5:-0.95742837798;PATZ1:-0.963507220345;NFATC1..3:-0.968313341115;TBP:-0.970656639069;GATA4:-0.982267465051;ATF2:-1.02183051599;TP53:-1.02184345469;TLX1..3_NFIC{dimer}:-1.07771658239;SOX2:-1.09356756968;ATF6:-1.10776394353;TEAD1:-1.12277580345;ZIC1..3:-1.12868566854;PRDM1:-1.14709999165;GFI1B:-1.17131141218;FOXL1:-1.17319088905;SP1:-1.2230279638;TAL1_TCF{3,4,12}:-1.23673648197;SPZ1:-1.25087629097;MAZ:-1.2794761358;ALX4:-1.28019059225;MAFB:-1.36626832486;NR3C1:-1.37562528425;TFCP2:-1.59034965965;JUN:-1.67375157407 | |top_motifs=GATA6:4.17008204007;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.11985678087;MYB:1.8229187037;STAT5{A,B}:1.3485278103;ALX1:1.23365072813;IKZF2:1.1833228366;E2F1..5:1.1404376186;NR5A1,2:1.09104721728;BREu{core}:1.08418574388;ELF1,2,4:1.00925362292;NR6A1:1.00417466035;PAX6:0.965771252341;CRX:0.950687652493;bHLH_family:0.901762542753;PITX1..3:0.893101520166;YY1:0.890751223367;HOXA9_MEIS1:0.83146512954;PPARG:0.825172925548;POU3F1..4:0.81591769758;RORA:0.799328233738;ZNF143:0.778639436352;ZNF148:0.746208288411;EN1,2:0.740655917451;FOX{I1,J2}:0.739629718269;ELK1,4_GABP{A,B1}:0.735761971361;STAT1,3:0.733781937881;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.713435361619;CUX2:0.657750030999;POU2F1..3:0.654127298104;TLX2:0.642480551395;SPIB:0.639925784554;PAX8:0.599874306156;ZBTB16:0.596779010562;TOPORS:0.569358070754;PBX1:0.551987996454;SPI1:0.531111245927;RUNX1..3:0.464159473392;OCT4_SOX2{dimer}:0.420091969446;ETS1,2:0.4022903416;RBPJ:0.391642665344;PRRX1,2:0.371766385087;POU1F1:0.37039609928;NFY{A,B,C}:0.360961355022;NANOG{mouse}:0.358382841743;HES1:0.352842432834;HAND1,2:0.347030275771;SOX{8,9,10}:0.340002609232;HOX{A6,A7,B6,B7}:0.329783663568;FOXP1:0.295420471598;POU6F1:0.259346112191;TFDP1:0.232455966168;ONECUT1,2:0.22772545984;EVI1:0.226181447259;DMAP1_NCOR{1,2}_SMARC:0.215036304484;AR:0.205314575373;PAX4:0.188755375865;NKX2-3_NKX2-5:0.124551303494;NRF1:0.112993994541;HBP1_HMGB_SSRP1_UBTF:0.108790339798;FOXP3:0.0978834142508;NKX2-1,4:0.0808062399783;NANOG:0.0687734739105;PAX3,7:0.0662871089819;SMAD1..7,9:0.0660631330437;TEF:0.0528653115693;ADNP_IRX_SIX_ZHX:0.0129342631123;HNF4A_NR2F1,2:-0.0158433775217;GCM1,2:-0.015903064967;HOX{A5,B5}:-0.0282114708134;FOXN1:-0.0416884716618;T:-0.0565625622892;NKX3-1:-0.0744377138446;AIRE:-0.0758475051455;ZFP161:-0.085724248341;SOX17:-0.0935918374209;SNAI1..3:-0.0973873094046;REST:-0.104307817642;NKX2-2,8:-0.115206731583;AHR_ARNT_ARNT2:-0.122736552986;NHLH1,2:-0.130942090443;MTF1:-0.135615197408;ARID5B:-0.169820906053;CDX1,2,4:-0.177802093314;POU5F1:-0.180066676891;NFKB1_REL_RELA:-0.186413328532;FOXQ1:-0.204231007463;PAX2:-0.205454792895;NFIX:-0.207905991706;RXR{A,B,G}:-0.219495244138;GZF1:-0.239170469863;LHX3,4:-0.246863084892;BPTF:-0.248524044166;MYOD1:-0.252345833791;ZEB1:-0.263817019503;HNF1A:-0.271616090151;TGIF1:-0.290244273285;ATF5_CREB3:-0.295353606129;XBP1:-0.298356667212;RXRA_VDR{dimer}:-0.302067776835;FOXM1:-0.310132540408;ZNF423:-0.317482966966;FOX{F1,F2,J1}:-0.318337424439;NFE2:-0.326260354293;NKX6-1,2:-0.327455176944;DBP:-0.332808310058;KLF4:-0.336795561653;ZNF384:-0.355158142999;SREBF1,2:-0.376041298048;HIF1A:-0.415300799414;NR1H4:-0.42343840308;VSX1,2:-0.441926067205;TFAP4:-0.450362456071;RFX2..5_RFXANK_RFXAP:-0.456441592357;HSF1,2:-0.45678667255;TFAP2{A,C}:-0.470876930399;CREB1:-0.475812134975;HOX{A4,D4}:-0.495341119867;FOXD3:-0.507589551409;NFIL3:-0.507899477935;IRF1,2:-0.507901719326;SOX5:-0.514852161168;STAT2,4,6:-0.533487534411;ZBTB6:-0.565673517939;PDX1:-0.570848202687;BACH2:-0.572843184925;TFAP2B:-0.580989844182;EGR1..3:-0.58396181601;NFE2L1:-0.618460815642;FOS_FOS{B,L1}_JUN{B,D}:-0.619888877399;MED-1{core}:-0.630764014512;MYBL2:-0.644423150302;MEF2{A,B,C,D}:-0.651759458001;ATF4:-0.657344269118;FOXA2:-0.662185042001;ESR1:-0.669375225616;MYFfamily:-0.671418825629;MTE{core}:-0.685203081295;UFEwm:-0.685331875697;IRF7:-0.690108087302;GTF2I:-0.697175159655;CDC5L:-0.6983559116;SRF:-0.710974336342;HIC1:-0.723207187603;GFI1:-0.729478386922;NKX3-2:-0.73238514344;LEF1_TCF7_TCF7L1,2:-0.74154383171;TBX4,5:-0.766875889781;EBF1:-0.76713577769;HLF:-0.781457753325;NFE2L2:-0.806907397277;XCPE1{core}:-0.812020817978;CEBPA,B_DDIT3:-0.814769726589;FOSL2:-0.825951912995;HMGA1,2:-0.826435039764;GLI1..3:-0.831632090337;ESRRA:-0.841217237677;RREB1:-0.844191963421;RFX1:-0.856098007956;HMX1:-0.86217214087;IKZF1:-0.87132436389;PAX1,9:-0.874832039592;MZF1:-0.895483548983;EP300:-0.900581541622;FOXO1,3,4:-0.916407580159;FOX{D1,D2}:-0.938278065473;ZNF238:-0.938500782657;GTF2A1,2:-0.938747252679;LMO2:-0.948288473254;PAX5:-0.95742837798;PATZ1:-0.963507220345;NFATC1..3:-0.968313341115;TBP:-0.970656639069;GATA4:-0.982267465051;ATF2:-1.02183051599;TP53:-1.02184345469;TLX1..3_NFIC{dimer}:-1.07771658239;SOX2:-1.09356756968;ATF6:-1.10776394353;TEAD1:-1.12277580345;ZIC1..3:-1.12868566854;PRDM1:-1.14709999165;GFI1B:-1.17131141218;FOXL1:-1.17319088905;SP1:-1.2230279638;TAL1_TCF{3,4,12}:-1.23673648197;SPZ1:-1.25087629097;MAZ:-1.2794761358;ALX4:-1.28019059225;MAFB:-1.36626832486;NR3C1:-1.37562528425;TFCP2:-1.59034965965;JUN:-1.67375157407 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10766-110F1;search_select_hide=table117:FF:10766-110F1 | |||
}} | }} | ||
Latest revision as of 15:03, 3 June 2020
| Name: | chronic myelogenous leukemia (CML) cell line:MEG-A2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11865 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11865
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11865
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0686 |
| 10 | 10 | 0.0158 |
| 100 | 100 | 0.66 |
| 101 | 101 | 0.668 |
| 102 | 102 | 0.374 |
| 103 | 103 | 0.184 |
| 104 | 104 | 0.673 |
| 105 | 105 | 0.575 |
| 106 | 106 | 0.976 |
| 107 | 107 | 0.828 |
| 108 | 108 | 0.581 |
| 109 | 109 | 0.0125 |
| 11 | 11 | 0.0487 |
| 110 | 110 | 0.396 |
| 111 | 111 | 0.0318 |
| 112 | 112 | 0.399 |
| 113 | 113 | 0.581 |
| 114 | 114 | 0.134 |
| 115 | 115 | 0.135 |
| 116 | 116 | 0.103 |
| 117 | 117 | 0.0442 |
| 118 | 118 | 0.132 |
| 119 | 119 | 0.355 |
| 12 | 12 | 0.774 |
| 120 | 120 | 0.59 |
| 121 | 121 | 0.7 |
| 122 | 122 | 0.937 |
| 123 | 123 | 0.00784 |
| 124 | 124 | 0.576 |
| 125 | 125 | 0.0738 |
| 126 | 126 | 0.544 |
| 127 | 127 | 0.0865 |
| 128 | 128 | 0.887 |
| 129 | 129 | 0.721 |
| 13 | 13 | 0.00524 |
| 130 | 130 | 0.565 |
| 131 | 131 | 0.38 |
| 132 | 132 | 0.659 |
| 133 | 133 | 0.0449 |
| 134 | 134 | 0.67 |
| 135 | 135 | 0.396 |
| 136 | 136 | 0.0588 |
| 137 | 137 | 0.939 |
| 138 | 138 | 0.951 |
| 139 | 139 | 0.6 |
| 14 | 14 | 0.741 |
| 140 | 140 | 0.505 |
| 141 | 141 | 0.293 |
| 142 | 142 | 0.434 |
| 143 | 143 | 0.142 |
| 144 | 144 | 0.692 |
| 145 | 145 | 0.731 |
| 146 | 146 | 0.801 |
| 147 | 147 | 0.0513 |
| 148 | 148 | 0.956 |
| 149 | 149 | 0.167 |
| 15 | 15 | 0.235 |
| 150 | 150 | 0.812 |
| 151 | 151 | 0.816 |
| 152 | 152 | 0.677 |
| 153 | 153 | 0.842 |
| 154 | 154 | 0.816 |
| 155 | 155 | 0.0715 |
| 156 | 156 | 0.819 |
| 157 | 157 | 0.442 |
| 158 | 158 | 0.601 |
| 159 | 159 | 0.0968 |
| 16 | 16 | 0.957 |
| 160 | 160 | 0.432 |
| 161 | 161 | 0.287 |
| 162 | 162 | 0.873 |
| 163 | 163 | 0.284 |
| 164 | 164 | 0.0938 |
| 165 | 165 | 0.438 |
| 166 | 166 | 0.163 |
| 167 | 167 | 0.456 |
| 168 | 168 | 0.861 |
| 169 | 169 | 0.548 |
| 17 | 17 | 0.97 |
| 18 | 18 | 0.203 |
| 19 | 19 | 0.923 |
| 2 | 2 | 0.515 |
| 20 | 20 | 0.222 |
| 21 | 21 | 0.343 |
| 22 | 22 | 0.656 |
| 23 | 23 | 0.017 |
| 24 | 24 | 0.37 |
| 25 | 25 | 0.322 |
| 26 | 26 | 0.0938 |
| 27 | 27 | 0.948 |
| 28 | 28 | 0.738 |
| 29 | 29 | 0.0185 |
| 3 | 3 | 0.174 |
| 30 | 30 | 0.00941 |
| 31 | 31 | 0.368 |
| 32 | 32 | 0.0143 |
| 33 | 33 | 0.408 |
| 34 | 34 | 0.758 |
| 35 | 35 | 0.663 |
| 36 | 36 | 0.0335 |
| 37 | 37 | 0.271 |
| 38 | 38 | 0.364 |
| 39 | 39 | 0.42 |
| 4 | 4 | 0.294 |
| 40 | 40 | 0.315 |
| 41 | 41 | 0.345 |
| 42 | 42 | 0.396 |
| 43 | 43 | 0.62 |
| 44 | 44 | 0.791 |
| 45 | 45 | 0.686 |
| 46 | 46 | 0.321 |
| 47 | 47 | 0.0539 |
| 48 | 48 | 0.13 |
| 49 | 49 | 0.263 |
| 5 | 5 | 0.919 |
| 50 | 50 | 0.662 |
| 51 | 51 | 0.532 |
| 52 | 52 | 0.764 |
| 53 | 53 | 0.267 |
| 54 | 54 | 0.549 |
| 55 | 55 | 0.198 |
| 56 | 56 | 0.868 |
| 57 | 57 | 0.207 |
| 58 | 58 | 0.159 |
| 59 | 59 | 0.639 |
| 6 | 6 | 0.409 |
| 60 | 60 | 0.558 |
| 61 | 61 | 0.151 |
| 62 | 62 | 0.309 |
| 63 | 63 | 0.614 |
| 64 | 64 | 0.234 |
| 65 | 65 | 0.807 |
| 66 | 66 | 0.0264 |
| 67 | 67 | 0.992 |
| 68 | 68 | 0.123 |
| 69 | 69 | 0.824 |
| 7 | 7 | 0.0494 |
| 70 | 70 | 0.984 |
| 71 | 71 | 0.168 |
| 72 | 72 | 0.433 |
| 73 | 73 | 0.398 |
| 74 | 74 | 0.322 |
| 75 | 75 | 0.0118 |
| 76 | 76 | 0.161 |
| 77 | 77 | 0.376 |
| 78 | 78 | 0.00288 |
| 79 | 79 | 0.00635 |
| 8 | 8 | 0.134 |
| 80 | 80 | 0.49 |
| 81 | 81 | 0.553 |
| 82 | 82 | 0.33 |
| 83 | 83 | 0.576 |
| 84 | 84 | 0.591 |
| 85 | 85 | 0.0353 |
| 86 | 86 | 0.913 |
| 87 | 87 | 0.0219 |
| 88 | 88 | 0.198 |
| 89 | 89 | 0.687 |
| 9 | 9 | 0.93 |
| 90 | 90 | 0.0905 |
| 91 | 91 | 0.753 |
| 92 | 92 | 0.62 |
| 93 | 93 | 0.834 |
| 94 | 94 | 0.7 |
| 95 | 95 | 0.00407 |
| 96 | 96 | 0.635 |
| 97 | 97 | 0.448 |
| 98 | 98 | 0.0465 |
| 99 | 99 | 0.469 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11865
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:8552 chronic myeloid leukemia
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100740 myeloid leukemia cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)
8552 (chronic myeloid leukemia)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0100740 (myeloid leukemia cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
