FFCP PHASE1:Hg19::chr19:6590884..6590916,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:6590884..6590916,-
|short_description=p3@CD70
|description=CAGE_peak_3_at_CD70_5end
|association_with_transcript=96bp_to_AB590870,BT007211_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=970 | |EntrezGene=970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |HGNC=11937 | ||
|TSSclassifier=strong | |||
|UniProt=Q53XX4 | |UniProt=Q53XX4 | ||
|association_with_transcript=96bp_to_AB590870,BT007211_5end | |||
|cluster_id=chr19:6590884..6590916,- | |||
|coexpression_cluster_id=C3830 | |||
|description=CAGE_peak_3_at_CD70_5end | |||
|id=chr19:6590884..6590916,- | |||
|ontology_enrichment_celltype=CL:0000542!1.89e-23!53;CL:0000051!1.89e-23!53;CL:0000838!1.12e-22!52;CL:0000945!3.73e-17!24;CL:0000826!3.73e-17!24;CL:0000236!1.26e-09!14;CL:0000084!2.69e-07!25;CL:0000827!2.69e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.88e-24;24!CL:0000542;7.99e-12;53!CL:0000236;2.77e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.30e-24,24;CL:0000826,2.30e-24,24;CL:0000542,1.92e-19,53;CL:0000051,1.92e-19,53;CL:0000838,2.19e-18,52;CL:0000236,9.32e-12,14;CL:0000988,3.08e-07,177;CL:0002087,4.93e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;7.99e-12;53 | |||
|ontology_enrichment_disease=DOID:14566!2.06e-09!239;DOID:162!3.45e-09!235;DOID:2531!5.27e-07!51;DOID:0060083!5.27e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.54e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.84e-12,239;DOID:162,1.39e-11,235;DOID:2531,1.14e-09,51;DOID:0060083,1.14e-09,51;DOID:0060058,1.70e-09,10;DOID:0050686,3.21e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.00e-10!9;UBERON:0001557!1.23e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.54e-16;9!UBERON:0001557;7.54e-16;9!UBERON:0002113;7.41e-07;24!UBERON:0011143;7.41e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.16e-16,9;UBERON:0001557,5.94e-09,19 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,2.43966399395253,0.61560529038394,1.02000345622126,1.88072832886853,0,0.136874425072884,0,9.93374274723366,8.6205618922443,12.9872789167571,0,0.383829398097213,0,0,0,0,9.76086727311801,5.9711077644717,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0.56738522469114,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,1.63841583378639,3.55803701545422,1.28019066769952,1.60158394814405,0.574752439954483,1.32208974556972,0.954053754535364,5.69212969109448,4.11066032559657,1.91136614062614,0,1.12101712596307,0,0,0,1.43921049299656,12.7061736496915,0.32592226663359,0,0,17.0457999034316,4.41908861212256,4.43067789167242,6.22848886659536,43.1667747475525,37.9773294874844,8.71520894399483,7.46145048021791,6.0858648004361,0,0,0,7.0251792472491,0.383220493601921,1.37450978193052,0.506039384039006,0.95569624297229,1.30216690771284,0.950452044448374,0.903450714466637,0.895906278080929,2.49861453104692,1.18388626022008,0.821127996921047,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,19.2840084064946,22.2531790903094,17.8348162113777,16.6543898825915,17.6482349714849,18.7443789097766,21.303346689306,22.1730255591641,22.3153351028906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0.901029173531752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,4.03506518376698,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,2.23297027036899,0.306923946576125,0,0.128139149255701,0,0,0,0,0.532685175939381,0,0,0,0,0,0,0,0,0,0.902399225814824,0.308061348417659,0.784349769176855,4.38417673959782,1.58327443339314,1.13733384070897,0.340187410553031,5.61381381865562,3.08454505380579,2.70946437543853,3.01013864312912,1.78413391131527,0,2.91037181138832,0.657779629937804,0,0,0,0,0,4.48690377609883,4.53802249563234,0,0,0,1.64340221096607,0.616194468458578,0.307007349452259,0,0.107420244868274,0,0.511359764496605,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26016233240486,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.476463550915578,0.822724546172388,0.648473311192717,0,0,8.7595738324528,0,0,8.9185524060345,3.46246111143468,0,0.797131363644112,0.399158742865633,0,0,0,0,6.84704037099577,0,0,0,0.963528450622197,4.237793851012,6.81353980304522,0,7.37377834340299,10.9601292867284,8.34245708559543,0,0,1.23087398947712,0,0.99921590399346,0,0,0.146508179271894,0.121360521749513,16.2707341045118,9.37649284461163,0,0,0,0,0,0.333926115068718,0,1.05562704063997,0.19924798825107,0.276283915531148,0,0,9.10827560411914,0,0,0,11.2545921449912,0.295930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.307801034015188,0.91153644677601,0,0,0,0,0,0,0,0.31396051279005,1.99454018280188,0,0,0,0,0,2.3209787098083,0,0,0,0.995261931078505,0.176915129006678,0,8.59911273173804,5.31324937469962,4.59456577824004,0.067401132980677,0,0,7.48064635784231,6.84826166262314,0,0,0,0.30607276163049,0,6.76455387365216,0,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0.261177619741208,0.34945333648406,8.59930162358083,0,0,0,0.581934098930517,4.05978182780901,0.225980740780532,1.78154502040776,0.19871461170299,0.0633107959558787,0.195551382734803,0,0,9.99048047910651,7.34861127485941,2.97795150031381,0,0,0.248505071130865,0.235694034616795,1.22313785466253,1.46443984837266,1.32597682927218,0,0,0,0,0,18.6650021538313,0,0,0.717873024576814,0.798716001995964,0,0,0,0,0,0,0,0,0,6.09647990873648,0,0,0,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0,0,0.739202355635845,16.4944352186217,0.191915197319445,0,0,4.32256514013075,0,0,0,3.59190574687462,0.164185041498678,0,0.339936274560377,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,13.8328142328561,8.52548188666271,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,1.24513771442608,5.24917713440848,0,0,18.8212655758537,0,0,0.447764408660622,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0.310874401165561,0,0.159296767163702,0.449803112163605,0.931577741257556,0,0,0,0,0,0,0,1.61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| 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| ||
|short_description=p3@CD70 | |||
}} | }} |
Latest revision as of 17:16, 24 September 2015
Short description: | p3@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD70_5end |
Coexpression cluster: | C3830_CD4_Hep2_serous_testicular_meningioma_hairy_mesothelioma |
Association with transcript: | 96bp_to_AB590870, BT007211_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | Q53XX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.30e-24 | 24 |
pro-B cell | 2.30e-24 | 24 |
lymphocyte | 1.92e-19 | 53 |
common lymphoid progenitor | 1.92e-19 | 53 |
lymphoid lineage restricted progenitor cell | 2.19e-18 | 52 |
B cell | 9.32e-12 | 14 |
hematopoietic cell | 3.08e-07 | 177 |
nongranular leukocyte | 4.93e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.16e-16 | 9 |
upper respiratory tract | 5.94e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.84e-12 | 239 |
cancer | 1.39e-11 | 235 |
hematologic cancer | 1.14e-09 | 51 |
immune system cancer | 1.14e-09 | 51 |
lymphoma | 1.70e-09 | 10 |
organ system cancer | 3.21e-09 | 137 |