FFCP PHASE1:Hg19::chr1:100818080..100818094,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:100818080..100818094,+
|short_description=p2@CDC14A
|description=CAGE_peak_2_at_CDC14A_5end
|association_with_transcript=22bp_to_ENST00000370124_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8556 | |EntrezGene=8556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1718 | |HGNC=1718 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000370124_5end | |||
|cluster_id=chr1:100818080..100818094,+ | |||
|coexpression_cluster_id=C3568 | |||
|description=CAGE_peak_2_at_CDC14A_5end | |||
|id=chr1:100818080..100818094,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.43e-22!172;CL:0000566!4.43e-22!172;CL:0000988!4.37e-21!182;CL:0002032!3.42e-19!165;CL:0000837!3.42e-19!165;CL:0000738!8.78e-18!140;CL:0000791!8.57e-13!18;CL:0000789!8.57e-13!18;CL:0002420!8.57e-13!18;CL:0002419!8.57e-13!18;CL:0000790!8.57e-13!18;CL:0000084!1.83e-11!25;CL:0000827!1.83e-11!25;CL:0002031!2.18e-11!124;CL:0002087!1.70e-10!119;CL:0000763!2.98e-10!112;CL:0000049!2.98e-10!112;CL:0000542!1.82e-09!53;CL:0000051!1.82e-09!53;CL:0000838!2.18e-09!52;CL:0000625!1.56e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.41e-23;18!CL:0000789;3.41e-23;18!CL:0002419;3.41e-23;18!CL:0000084;6.20e-22;25!CL:0000625;8.01e-15;11!CL:0000094;6.34e-10;8!CL:0000624;2.06e-09;6!CL:0000542;9.76e-09;53!CL:0000097;3.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.92e-24,168;CL:0000791,5.74e-23,18;CL:0000789,5.74e-23,18;CL:0002420,5.74e-23,18;CL:0002419,5.74e-23,18;CL:0000790,5.74e-23,18;CL:0000988,2.24e-22,177;CL:0000084,1.20e-21,25;CL:0000827,1.20e-21,25;CL:0000738,8.75e-21,136;CL:0002032,4.14e-20,161;CL:0000837,4.14e-20,161;CL:0000625,7.65e-15,11;CL:0000838,3.64e-14,52;CL:0000542,1.03e-13,53;CL:0000051,1.03e-13,53;CL:0002031,5.13e-13,120;CL:0002087,5.19e-11,115;CL:0000094,6.38e-10,8;CL:0000624,2.12e-09,6;CL:0000763,3.00e-08,108;CL:0000049,3.00e-08,108;CL:0000097,2.77e-07,5;CL:0002028,2.77e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;3.41e-23;18!CL:0000051;9.76e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-08!102;UBERON:0003061!2.11e-08!102;UBERON:0002193!5.27e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.11e-08;15!UBERON:0000179;2.11e-08;15!UBERON:0000463;2.11e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.70e-08,15;UBERON:0000179,1.70e-08,15;UBERON:0000463,1.70e-08,15;UBERON:0002390,8.48e-08,98;UBERON:0003061,8.48e-08,98;UBERON:0002193,9.07e-08,108 | |||
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| ||
|short_description=p2@CDC14A | |||
}} | }} |
Latest revision as of 04:29, 25 September 2015
Short description: | p2@CDC14A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC14A_5end |
Coexpression cluster: | C3568_Mast_Eosinophils_CD4_immature_CD8_Neutrophils_Natural |
Association with transcript: | 22bp_to_ENST00000370124_5end |
EntrezGene: | CDC14A |
HGNC: | 1718 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.92e-24 | 168 |
mature alpha-beta T cell | 5.74e-23 | 18 |
alpha-beta T cell | 5.74e-23 | 18 |
immature T cell | 5.74e-23 | 18 |
mature T cell | 5.74e-23 | 18 |
immature alpha-beta T cell | 5.74e-23 | 18 |
hematopoietic cell | 2.24e-22 | 177 |
T cell | 1.20e-21 | 25 |
pro-T cell | 1.20e-21 | 25 |
leukocyte | 8.75e-21 | 136 |
hematopoietic oligopotent progenitor cell | 4.14e-20 | 161 |
hematopoietic multipotent progenitor cell | 4.14e-20 | 161 |
CD8-positive, alpha-beta T cell | 7.65e-15 | 11 |
lymphoid lineage restricted progenitor cell | 3.64e-14 | 52 |
lymphocyte | 1.03e-13 | 53 |
common lymphoid progenitor | 1.03e-13 | 53 |
hematopoietic lineage restricted progenitor cell | 5.13e-13 | 120 |
nongranular leukocyte | 5.19e-11 | 115 |
granulocyte | 6.38e-10 | 8 |
CD4-positive, alpha-beta T cell | 2.12e-09 | 6 |
myeloid cell | 3.00e-08 | 108 |
common myeloid progenitor | 3.00e-08 | 108 |
mast cell | 2.77e-07 | 5 |
basophil mast progenitor cell | 2.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 1.70e-08 | 15 |
haemolymphatic fluid | 1.70e-08 | 15 |
organism substance | 1.70e-08 | 15 |
hematopoietic system | 8.48e-08 | 98 |
blood island | 8.48e-08 | 98 |
hemolymphoid system | 9.07e-08 | 108 |