FFCP PHASE1:Hg19::chr12:92529815..92529831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:92529815..92529831,- | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr12:92529815..92529831,- | |description=CAGE_peak_at_chr12:92529815..92529831,- | ||
|id=chr12:92529815..92529831,- | |id=chr12:92529815..92529831,- | ||
|ontology_enrichment_celltype=CL:0000791;2.44e-28;18!CL:0000789;2.44e-28;18!CL:0002419;2.44e-28;18!CL:0000625;6.53e-21;11!CL:0000084;5.29e-20;25!CL:0000623;5.88e-20;3!CL:0000542;3.55e-19;53!CL:0000236;1.68e-17;13!CL:0000624;8.15e-11;6!CL:0002393;1.29e-10;6!CL:0002397;1.29e-10;6!CL:0000945;3.06e-09;24!CL:0002087;1.55e-08;104!CL:0000228;1.14e-07;1!CL:0002372;1.14e-07;1 | |ontology_enrichment_celltype=CL:0000738!1.09e-24!140;CL:0002087!2.85e-24!119;CL:0000542!2.97e-20!53;CL:0000051!2.97e-20!53;CL:0000838!1.12e-19!52;CL:0000037!2.51e-19!172;CL:0000566!2.51e-19!172;CL:0002031!3.68e-19!124;CL:0000988!2.22e-18!182;CL:0002032!2.43e-18!165;CL:0000837!2.43e-18!165;CL:0002057!4.48e-12!42;CL:0000860!1.00e-10!45;CL:0000084!1.55e-10!25;CL:0000827!1.55e-10!25;CL:0000791!3.80e-10!18;CL:0000789!3.80e-10!18;CL:0002420!3.80e-10!18;CL:0002419!3.80e-10!18;CL:0000790!3.80e-10!18;CL:0000236!7.60e-08!14;CL:0000945!1.07e-07!24;CL:0000826!1.07e-07!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;2.44e-28;18!CL:0000789;2.44e-28;18!CL:0002419;2.44e-28;18!CL:0000625;6.53e-21;11!CL:0000084;5.29e-20;25!CL:0000623;5.88e-20;3!CL:0000542;3.55e-19;53!CL:0000236;1.68e-17;13!CL:0000624;8.15e-11;6!CL:0002393;1.29e-10;6!CL:0002397;1.29e-10;6!CL:0000945;3.06e-09;24!CL:0002087;1.55e-08;104!CL:0000228;1.14e-07;1!CL:0002372;1.14e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.26e-37,52;CL:0000542,2.50e-36,53;CL:0000051,2.50e-36,53;CL:0000791,2.62e-28,18;CL:0000789,2.62e-28,18;CL:0002420,2.62e-28,18;CL:0002419,2.62e-28,18;CL:0000790,2.62e-28,18;CL:0002087,4.67e-23,115;CL:0000738,6.19e-23,136;CL:0000625,7.41e-21,11;CL:0000623,5.01e-20,3;CL:0000825,5.01e-20,3;CL:0000084,5.56e-20,25;CL:0000827,5.56e-20,25;CL:0002031,1.05e-19,120;CL:0000037,1.04e-17,168;CL:0002032,7.26e-17,161;CL:0000837,7.26e-17,161;CL:0000988,1.41e-16,177;CL:0000236,2.62e-16,14;CL:0000624,7.77e-11,6;CL:0000945,2.71e-09,24;CL:0000826,2.71e-09,24;CL:0000228,9.72e-08,1;CL:0002372,9.72e-08,1;CL:0002393,3.43e-07,9;CL:0002397,3.43e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.44e-28;18!CL:0000051;3.55e-19;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:92529815..92529831,- | |short_description=p@chr12:92529815..92529831,- | ||
}} | }} |
Latest revision as of 13:32, 24 July 2015
Short description: | p@chr12:92529815..92529831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92529815..92529831, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.26e-37 | 52 |
lymphocyte | 2.50e-36 | 53 |
common lymphoid progenitor | 2.50e-36 | 53 |
mature alpha-beta T cell | 2.62e-28 | 18 |
alpha-beta T cell | 2.62e-28 | 18 |
immature T cell | 2.62e-28 | 18 |
mature T cell | 2.62e-28 | 18 |
immature alpha-beta T cell | 2.62e-28 | 18 |
nongranular leukocyte | 4.67e-23 | 115 |
leukocyte | 6.19e-23 | 136 |
CD8-positive, alpha-beta T cell | 7.41e-21 | 11 |
natural killer cell | 5.01e-20 | 3 |
pro-NK cell | 5.01e-20 | 3 |
T cell | 5.56e-20 | 25 |
pro-T cell | 5.56e-20 | 25 |
hematopoietic lineage restricted progenitor cell | 1.05e-19 | 120 |
hematopoietic stem cell | 1.04e-17 | 168 |
hematopoietic oligopotent progenitor cell | 7.26e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.26e-17 | 161 |
hematopoietic cell | 1.41e-16 | 177 |
B cell | 2.62e-16 | 14 |
CD4-positive, alpha-beta T cell | 7.77e-11 | 6 |
lymphocyte of B lineage | 2.71e-09 | 24 |
pro-B cell | 2.71e-09 | 24 |
multinucleate cell | 9.72e-08 | 1 |
myotube | 9.72e-08 | 1 |
intermediate monocyte | 3.43e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.43e-07 | 9 |