FFCP PHASE1:Hg19::chr3:189840061..189840073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55214 | |EntrezGene=55214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19317 | |HGNC=19317 | ||
|TSSclassifier=strong | |||
|UniProt=D3DNV8,Q8IVL5 | |UniProt=D3DNV8,Q8IVL5 | ||
|association_with_transcript=152bp_to_ENST00000427335,NM_001134418,uc003fsg.2_5end | |association_with_transcript=152bp_to_ENST00000427335,NM_001134418,uc003fsg.2_5end | ||
|cluster_id=chr3:189840061..189840073,- | |||
|coexpression_cluster_id=C137 | |coexpression_cluster_id=C137 | ||
|description=CAGE_peak_14_at_LEPREL1_5end | |description=CAGE_peak_14_at_LEPREL1_5end | ||
|id=chr3:189840061..189840073,- | |id=chr3:189840061..189840073,- | ||
|ontology_enrichment_celltype=CL:0002327;9.09e-34;4!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | |ontology_enrichment_celltype=CL:0002327!5.36e-14!4;CL:0002603!1.60e-08!3;CL:0000128!7.22e-08!7;CL:0000126!7.22e-08!7;CL:0000127!7.22e-08!7;CL:0002453!7.22e-08!7;CL:0000946!2.99e-07!1;CL:0000786!2.99e-07!1;CL:0000980!2.99e-07!1;CL:0000342!5.69e-07!1;CL:0002565!5.69e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0002327;9.09e-34;4!CL:0002149;8.97e-07;6!CL:0002255;8.97e-07;6 | ||
|ontology_enrichment_disease=DOID:4556;1.85e-12;3!DOID:3908;5.35e-08;5!DOID:3001;8.97e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0002327,9.88e-34,4;CL:0002149,9.49e-07,6;CL:0002255,9.49e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0001911;9.09e-34;4!UBERON:0003100;3.37e-08;41 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;1.85e-12;3!DOID:3908;5.35e-08;5!DOID:3001;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.85e-12,3;DOID:3908,5.35e-08,5;DOID:3001,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001911!5.36e-14!4;UBERON:0005333!5.36e-14!4;UBERON:0008425!5.36e-14!4;UBERON:0005311!5.36e-14!4;UBERON:0000076!6.83e-12!8;UBERON:0006947!1.02e-08!3;UBERON:0004054!1.02e-08!3;UBERON:0005085!1.05e-08!29;UBERON:0003135!2.46e-08!11;UBERON:0000998!3.57e-07!1;UBERON:0006868!3.57e-07!1;UBERON:0001301!3.78e-07!1;UBERON:0002506!5.69e-07!1;UBERON:0001769!5.69e-07!1;UBERON:0000473!9.08e-07!8;UBERON:0005904!9.81e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.09e-34;4!UBERON:0003100;3.37e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,9.88e-34,4;UBERON:0005333,9.88e-34,4;UBERON:0008425,9.88e-34,4;UBERON:0005311,9.88e-34,4;UBERON:0000076,1.85e-17,8;UBERON:0005153,8.39e-09,37;UBERON:0003100,5.85e-08,41;UBERON:0005157,4.50e-07,47 | |||
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|short_description=p14@LEPREL1 | |short_description=p14@LEPREL1 | ||
}} | }} |
Latest revision as of 09:38, 17 September 2015
Short description: | p14@LEPREL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LEPREL1_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 152bp_to_ENST00000427335, NM_001134418, uc003fsg.2_5end |
EntrezGene: | LEPREL1 |
HGNC: | 19317 |
UniProt: | D3DNV8Q8IVL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 9.88e-34 | 4 |
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 9.88e-34 | 4 |
mammary bud | 9.88e-34 | 4 |
mammary ridge | 9.88e-34 | 4 |
mammary placode | 9.88e-34 | 4 |
external ectoderm | 1.85e-17 | 8 |
epithelial bud | 8.39e-09 | 37 |
female organism | 5.85e-08 | 41 |
epithelial fold | 4.50e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.85e-12 | 3 |
non-small cell lung carcinoma | 5.35e-08 | 5 |
female reproductive endometrioid cancer | 9.49e-07 | 6 |