FFCP PHASE1:Hg19::chr1:78398956..78398980,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=229bp_to_uc001dig.3_5end | |association_with_transcript=229bp_to_uc001dig.3_5end | ||
|cluster_id=chr1:78398956..78398980,+ | |||
|coexpression_cluster_id=C933 | |coexpression_cluster_id=C933 | ||
|description=CAGE_peak_6_at_NEXN_5end | |description=CAGE_peak_6_at_NEXN_5end | ||
|id=chr1:78398956..78398980,+ | |id=chr1:78398956..78398980,+ | ||
|ontology_enrichment_celltype=CL:0002334;1.42e-08;12 | |ontology_enrichment_celltype=CL:0000057!1.36e-11!75;CL:0000055!2.53e-11!180 | ||
| | |ontology_enrichment_celltype_v019=CL:0002334;1.42e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.21e-14,76;CL:0002334,2.30e-08,12;CL:0000136,2.22e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002385;7.04e-12;31!UBERON:0001015;7.04e-12;31!UBERON:0000383;7.04e-12;31!UBERON:0001134;1.10e-07;16!UBERON:0002036;1.10e-07;16!UBERON:0004457;1.15e-07;9!UBERON:0000042;1.15e-07;9!UBERON:0003688;2.21e-07;6!UBERON:0002358;2.21e-07;6!UBERON:0003684;2.21e-07;6!UBERON:0001178;2.21e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.58e-07!95;UBERON:0000914!6.39e-07!83;UBERON:0002329!6.39e-07!83;UBERON:0003077!6.39e-07!83;UBERON:0003059!6.39e-07!83;UBERON:0007282!6.39e-07!83;UBERON:0009618!6.39e-07!83;UBERON:0007285!6.39e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.04e-12;31!UBERON:0001015;7.04e-12;31!UBERON:0000383;7.04e-12;31!UBERON:0001134;1.10e-07;16!UBERON:0002036;1.10e-07;16!UBERON:0004457;1.15e-07;9!UBERON:0000042;1.15e-07;9!UBERON:0003688;2.21e-07;6!UBERON:0002358;2.21e-07;6!UBERON:0003684;2.21e-07;6!UBERON:0001178;2.21e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.27e-09,99;UBERON:0004797,7.92e-08,7;UBERON:0003688,1.56e-07,6;UBERON:0002358,1.56e-07,6;UBERON:0003684,1.56e-07,6;UBERON:0001178,1.56e-07,6;UBERON:0002385,4.65e-07,64;UBERON:0001015,4.65e-07,64;UBERON:0000383,4.65e-07,64 | |||
|phase1_expression=1.81678379270557,10.0627246228762,2.96004248601539,6.00439790118782,6.25745532198203,2.61701557230111,2.53299878168311,2.52687949370732,1.04474251279935,0.245733936501509,0,0,0,0.990130823680373,0.662794751455832,4.03395087871065,4.21886169616784,1.46062018077475,3.41552959153355,0.123121058076788,0.204000691244253,0,0.286235987131057,1.09499540058307,0.87879847716362,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,0,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0,0,0.645484683583826,0,0,0,0.224723484445085,0.612167784741805,0,0.639337125799041,0.659702600373432,0.199463657621632,0,1.45104619314292,0,0,1.00499466102697,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0,0,0.48217676009124,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,9.75227465255847,2.68280343881454,0.639312809217652,2.89151321907653,0.50133791063589,3.33146993609895,0,0,0.472674085820339,1.55210578223795,1.22968699970376,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,1.25849830862972,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,3.47880366186723,1.39293562831038,1.98613771219828,2.58152958673932,2.12801029319014,0.560677600142307,1.06748995729705,2.4666754841716,0,0.404132016209064,0.163461903113459,0,1.15235184896,0,0.624320153660641,0.570471821544449,3.88566569434683,0.117434498643765,0.323745888736263,0,0.204154171254893,3.0708579327942,0.103325781175765,2.37600571456411,3.4617370098998,0,0,1.68336113954066,0.250237039743928,0.277064115484183,1.75591048352335,2.14541457059314,0.300476117813194,1.47461838108027,6.99619579186562,1.70845911054854,2.33125091275518,2.10063767259082,1.33968288009971,5.15281080091258,1.11670113798954,3.37552664482532,1.16924406193438,5.04867548488229,0.736399189138395,1.13152239773168,5.32514388774922,0.604512589365842,1.86516651541536,0,0,0,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0.36497735907583,0,3.85944562915731,0,4.64367928031979,1.44375896333917,0.473227200159376,0.674338760312407,0.241011029883482,0,0.217879444092406,0,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,0,0,0,1.77236972004421,0,0,1.3725424823882,0.219500570817251,0,0.502644862058154,0,0.325808305310325,0,5.77325368101093,0.115930404975077,0.70445216541493,0,0,0.570762456703795,0,0,0,0,0,0,1.84780341018745,0.283550194484773,0.716468181622786,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0.5867062865676,0.517086863031111,3.57656445851882,0.845302752556,1.86156681609409,1.04007436911366,0.257207374262142,0,0,9.72250356875403,0,0,0,2.84313558994037,0,0.904318131178758,0.871533458600294,4.49878460319257,0,0,2.10833939483032,1.19812427745791,2.29723871668228,2.85273810081437,2.02693829334611,1.84928690295345,1.25342674267927,0.448340575974109,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.271265023699736,4.99130067673937,4.99601168632053,2.52323864054295,2.57711112983969,0,0,2.0694614258501,1.99267679560631,0,2.17209036170207,0,0,0,0,0.106727557803444,0,1.66435439510497,0,1.24053903909388,4.75732117192994,2.52594084989766,1.66580894032411,3.07024349440022,4.82561763430822,0,2.00472601943452,1.24293207719189,1.14978018419333,1.55776328755086,1.62694529843943,0.120859449591622,0,0.0920809889358963,1.37777337797528,4.55227920016793,4.327105693661,0,0.847168708148562,0,0,2.11103257785751,0,0,3.02282282542995,0,0,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0.650756789328606,0.515205058238611,1.64825036673018,0.907604499126468,0,0,3.21367859688319,1.16004861950546,0.308097234229289,0.307007349452259,0.275673144969061,0.966782203814463,1.88521702088497,1.10794615640931,5.60901824574445,0,0,0,0,2.32422774648643,2.20368642781448,0,1.84820148105653,0,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0,5.99114583247489,0,0,3.05783177891635,0.823611089208164,1.64937363283961,0,0,0,0,0.731140468893853,0,2.04749867111979,3.11091950298168,0,0,0.66343897524122,0,0,1.9676842561399,0,0.30982349809975,0,3.29846110069318,0.982490410131212,0,0.354761064070598,1.89996871767898,3.29294892959902,0.379473173765715,0,0.0962221127255121,0,0,0.941438007767792,0,0,0,0,0,0,0.569647187174163,0,0.822724546172388,0.648473311192717,0.540031437238115,1.58625035258854,0.320472213382419,0,0,0.185803175125719,0.144269212976445,0.569134746787313,0,0.399158742865633,0,0.423347165447766,0,0.842391534340376,0.912938716132769,0,0,0,1.605880751037,3.02699560786571,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,1.17206543417515,0.36408156524854,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0.211125408127993,1.39473591775749,0.276283915531148,0,0.20453736500431,0,3.42143546427988,0.179736702294654,0,0,2.36744173528641,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0.120596438625408,0,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| ||
|short_description=p6@NEXN | |short_description=p6@NEXN | ||
}} | }} |
Latest revision as of 07:45, 19 September 2015
Short description: | p6@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NEXN_5end |
Coexpression cluster: | C933_skeletal_heart_left_penis_Cardiac_Preadipocyte_tongue |
Association with transcript: | 229bp_to_uc001dig.3_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.21e-14 | 76 |
preadipocyte | 2.30e-08 | 12 |
fat cell | 2.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.27e-09 | 99 |
blood vessel layer | 7.92e-08 | 7 |
omentum | 1.56e-07 | 6 |
peritoneum | 1.56e-07 | 6 |
abdominal cavity | 1.56e-07 | 6 |
visceral peritoneum | 1.56e-07 | 6 |
muscle tissue | 4.65e-07 | 64 |
musculature | 4.65e-07 | 64 |
musculature of body | 4.65e-07 | 64 |