FFCP PHASE1:Hg19::chr10:73576055..73576059,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73576055..73576059,+ | |||
|description=CAGE_peak_at_chr10:73576055..73576059,+ | |description=CAGE_peak_at_chr10:73576055..73576059,+ | ||
|id=chr10:73576055..73576059,+ | |id=chr10:73576055..73576059,+ | ||
|ontology_enrichment_celltype=CL:0002592;1.68e-12;3!CL:0000349;3.48e-07;19!CL:0000235;5.54e-07;6!CL:0000840;6.45e-07;5 | |ontology_enrichment_celltype=CL:0002194!6.75e-14!63;CL:0000576!6.75e-14!63;CL:0000040!6.75e-14!63;CL:0000559!6.75e-14!63;CL:0002009!4.95e-13!65;CL:0002057!9.60e-12!42;CL:0000839!4.08e-11!70;CL:0000557!9.05e-11!71;CL:0000860!2.83e-10!45;CL:0000766!6.80e-10!76;CL:0000048!6.01e-09!430;CL:0000003!7.93e-09!722;CL:0000723!8.16e-09!436;CL:0000548!8.21e-09!679;CL:0000004!8.21e-09!679;CL:0000255!8.21e-09!679;CL:0002371!9.11e-09!591;CL:0000144!1.24e-08!625;CL:0000012!1.69e-08!682;CL:0000034!5.80e-08!444 | ||
| | |ontology_enrichment_celltype_v019=CL:0002592;1.68e-12;3!CL:0000349;3.48e-07;19!CL:0000235;5.54e-07;6!CL:0000840;6.45e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,3.26e-12,3;CL:0002194,4.90e-09,59;CL:0000576,4.90e-09,59;CL:0000040,4.90e-09,59;CL:0000559,4.90e-09,59;CL:0002009,1.18e-08,61;CL:0000839,8.35e-08,66;CL:0000557,1.19e-07,67;CL:0002393,1.27e-07,9;CL:0002397,1.27e-07,9;CL:0000349,1.99e-07,19;CL:0000235,5.08e-07,6;CL:0000840,5.85e-07,5;CL:0001029,5.85e-07,5;CL:0000766,6.09e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003498;1.68e-12;3!UBERON:0005985;1.68e-12;3!UBERON:0001621;1.68e-12;3!UBERON:0005406;2.74e-09;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.82e-14!167;UBERON:0003081!5.25e-12!216;UBERON:0002371!1.04e-11!80;UBERON:0001474!8.11e-11!86;UBERON:0004765!1.06e-10!101;UBERON:0001434!1.06e-10!101;UBERON:0002390!1.11e-10!102;UBERON:0003061!1.11e-10!102;UBERON:0002193!1.83e-09!112;UBERON:0002405!1.15e-08!115;UBERON:0000926!1.60e-08!448;UBERON:0004120!1.60e-08!448;UBERON:0006603!1.60e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;1.68e-12;3!UBERON:0005985;1.68e-12;3!UBERON:0001621;1.68e-12;3!UBERON:0005406;2.74e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,5.25e-13,5;UBERON:0005985,5.25e-13,5;UBERON:0001621,3.26e-12,3;UBERON:0003081,4.91e-12,203;UBERON:0002204,4.62e-11,167;UBERON:0005631,2.51e-10,14;UBERON:0000158,2.51e-10,14;UBERON:0003124,6.18e-10,7;UBERON:0005406,2.33e-09,2;UBERON:0000926,2.48e-09,315;UBERON:0004120,2.48e-09,315;UBERON:0006603,2.48e-09,315;UBERON:0002371,9.33e-09,76;UBERON:0002390,4.45e-08,98;UBERON:0003061,4.45e-08,98;UBERON:0002193,4.95e-08,108;UBERON:0004765,5.74e-08,90;UBERON:0001474,6.88e-08,82;UBERON:0001434,7.49e-08,100;UBERON:0002405,1.17e-07,93 | |||
|phase1_expression=0.908391896352783,0,0,6.00439790118782,0.893922188854576,2.61701557230111,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,1.11389717664042,0.994192127183747,2.01697543935533,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0,0.572471974262113,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0,2.01523926815932,0.32389366601898,0.257575567634187,0.581592955118259,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0.272906150057846,1.79778787556068,0,0.641858054152187,0.639337125799041,0.659702600373432,0.199463657621632,0,0,0,0.622822248995575,0.75374599577023,0,0.65156653411535,1.81619850790011,0.736555271975129,0.949387162322653,0,1.27562579979026,2.09658645508376,0.22465726229299,0.300353785683013,0,1.99508920618874,0.79566670879636,2.73996230646951,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0,0.164437904603676,0.829050053357545,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0,0.378139268656271,0.443458794925128,0,0,0,0,5.51730569212962,1.56716763569341,0.132957960518865,2.38490624305342,0,0,0,0,0,0,0,0.275118041940067,0,1.8089173141853,0,0,0.805658634218294,0.760272105718513,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.529636723252875,0,0,0,2.1349799145941,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,2.7223723958405,0,0,0,0,0.103052529238439,0,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0,0,0.302256294682921,0,0.57978255948989,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,6.15542515218493,0,0.445893486866185,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0.65147236858747,1.42156779497018,0,2.71295439353627,0,0.299918973546171,3.64871341923571,1.50677127429638,0,0,0,0,1.15825045334063,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0.837581326671744,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.535286966391485,0.630809660135739,0.117141414992713,0,4.5481500811197,0,0,0,0.173767228936166,0,0.686286847621712,0.206768026122887,0,0,2.72814814301633,1.66435439510497,0,0,0.920771839728375,1.40330047216537,0.896974044789907,0,0,1.48418066444991,0,0,0.0821271560138091,0,0.348631135379878,0,0.200506470303285,0,0.229628896329213,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,1.02580050046556,0,0,0,0,0.082509499920588,0,0,1.6068392984416,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.0890320356467374,0.330569830721956,0,0,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0,1.116475108079,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,1.07923474549989,0.274537029736055,0,1.01091240786658,1.58510321173008,1.26377536871694,0,1.70599442741899,0,0.9554993798559,0,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,1.06428319221179,0.211107635297664,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0.507447609232169,0,0,0.714695326373367,0.822724546172388,1.29694662238543,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.90995587790152,1.78178808499583,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0,0.179021174675609,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0.23056390438806,0.179515288819544,0,3.82801391678303,0.457987967009312,1.5991043280559,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,0.174118413160805,0.17472666824203,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.590564889088493,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0,0,0,0.298509605773748,0,0.554805861502613,0.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| ||
|short_description=p@chr10:73576055..73576059,+ | |short_description=p@chr10:73576055..73576059,+ | ||
}} | }} |
Latest revision as of 15:17, 23 July 2015
Short description: | p@chr10:73576055..73576059, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73576055..73576059, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 3.26e-12 | 3 |
monopoietic cell | 4.90e-09 | 59 |
monocyte | 4.90e-09 | 59 |
monoblast | 4.90e-09 | 59 |
promonocyte | 4.90e-09 | 59 |
macrophage dendritic cell progenitor | 1.18e-08 | 61 |
myeloid lineage restricted progenitor cell | 8.35e-08 | 66 |
granulocyte monocyte progenitor cell | 1.19e-07 | 67 |
intermediate monocyte | 1.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.27e-07 | 9 |
extraembryonic cell | 1.99e-07 | 19 |
macrophage | 5.08e-07 | 6 |
immature conventional dendritic cell | 5.85e-07 | 5 |
common dendritic progenitor | 5.85e-07 | 5 |
myeloid leukocyte | 6.09e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
heart blood vessel | 5.25e-13 | 5 |
coronary vessel | 5.25e-13 | 5 |
coronary artery | 3.26e-12 | 3 |
lateral plate mesoderm | 4.91e-12 | 203 |
musculoskeletal system | 4.62e-11 | 167 |
extraembryonic membrane | 2.51e-10 | 14 |
membranous layer | 2.51e-10 | 14 |
chorion | 6.18e-10 | 7 |
perirenal fat | 2.33e-09 | 2 |
mesoderm | 2.48e-09 | 315 |
mesoderm-derived structure | 2.48e-09 | 315 |
presumptive mesoderm | 2.48e-09 | 315 |
bone marrow | 9.33e-09 | 76 |
hematopoietic system | 4.45e-08 | 98 |
blood island | 4.45e-08 | 98 |
hemolymphoid system | 4.95e-08 | 108 |
skeletal element | 5.74e-08 | 90 |
bone element | 6.88e-08 | 82 |
skeletal system | 7.49e-08 | 100 |
immune system | 1.17e-07 | 93 |