FFCP PHASE1:Hg19::chrX:114248448..114248459,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:114248448..114248459,- | |||
|coexpression_cluster_id=C4845 | |coexpression_cluster_id=C4845 | ||
|description=CAGE_peak_at_chrX:114248448..114248459,- | |description=CAGE_peak_at_chrX:114248448..114248459,- | ||
|id=chrX:114248448..114248459,- | |id=chrX:114248448..114248459,- | ||
|ontology_enrichment_celltype=CL:0002570;1.16e-15;8!CL:0002551;5.26e-12;6!CL:0002601;2.04e-09;1!CL:0000569;9.02e-09;4 | |ontology_enrichment_celltype=CL:0000188!3.44e-10!9;CL:0002551!6.49e-09!6;CL:0000569!8.26e-09!4;CL:0000011!8.26e-09!4;CL:0000055!1.46e-08!180;CL:0000057!8.93e-08!75;CL:0002368!3.78e-07!13 | ||
| | |ontology_enrichment_celltype_v019=CL:0002570;1.16e-15;8!CL:0002551;5.26e-12;6!CL:0002601;2.04e-09;1!CL:0000569;9.02e-09;4 | ||
|ontology_enrichment_disease=DOID:0060085;7.55e-09;1!DOID:3165;7.55e-09;1!DOID:0060121;7.55e-09;1!DOID:2438;7.55e-09;1!DOID:4418;7.55e-09;1 | |ontology_enrichment_celltype_v019_2=CL:0002570,1.18e-15,8;CL:0002551,6.74e-12,6;CL:0002601,2.04e-09,1;CL:0000569,7.29e-09,4;CL:0000011,7.29e-09,4 | ||
|ontology_enrichment_uberon=UBERON:0001013;1.09e-13;14!UBERON:0002067;3.59e-08;9 | |ontology_enrichment_development_v019=CL:0000011;9.02e-09;4 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;7.55e-09;1!DOID:3165;7.55e-09;1!DOID:0060121;7.55e-09;1!DOID:2438;7.55e-09;1!DOID:4418;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,5.75e-09,1;DOID:3165,5.75e-09,1;DOID:0060121,5.75e-09,1;DOID:2438,5.75e-09,1;DOID:4418,5.75e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000486!5.02e-08!82;UBERON:0000914!6.97e-08!83;UBERON:0002329!6.97e-08!83;UBERON:0003077!6.97e-08!83;UBERON:0003059!6.97e-08!83;UBERON:0007282!6.97e-08!83;UBERON:0009618!6.97e-08!83;UBERON:0007285!6.97e-08!83;UBERON:0004290!1.52e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.09e-13;14!UBERON:0002067;3.59e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.06e-13,14;UBERON:0002067,4.22e-08,9;UBERON:0004016,4.22e-08,9;UBERON:0010083,4.22e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,2.52687949370732,0,1.72013755551056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,1.24484414159907,0,0.490385709340376,0,0,0.234321431833797,1.24864030732128,0,1.04614076386261,2.46612447151906,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,2.03443756959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,2.535908257668,0,0,0.257207374262142,0,0,0.285955987316295,0,0,3.58309802723109,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,1.23190734020714,0,0.116210378459959,0,0,3.03867263488458,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05160100093111,0,0,0,0,0,0,0,0,0.290012154876366,1.69453478826109,0.307007349452259,0.413509717453592,0.214840489736547,0.290033387828457,0.596586391912706,0,1.4875642382488,0.192190067365106,0.510450849978337,0.4046311234222,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,3.19284957663538,0.211107635297664,0,0,0,2.21310859268678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00355669041231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,1.78843150532691,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,0,1.10961172300523,0,0.50313580350515,0,5.49216164152617,1.81477108515887,0.15543720058278,0.295710299979268,0,1.79921244865442,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,2.76158925377761,3.49698769298611,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.52687949370732,0,1.72013755551056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,1.24484414159907,0,0.490385709340376,0,0,0.234321431833797,1.24864030732128,0,1.04614076386261,2.46612447151906,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0.505008341862199,0.375355559615893,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.329250856225877,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447792613514241,2.03443756959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,2.535908257668,0,0,0.257207374262142,0,0,0.285955987316295,0,0,3.58309802723109,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,1.23190734020714,0,0.116210378459959,0,0,3.03867263488458,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05160100093111,0,0,0,0,0,0,0,0,0.290012154876366,1.69453478826109,0.307007349452259,0.413509717453592,0.214840489736547,0.290033387828457,0.596586391912706,0,1.4875642382488,0.192190067365106,0.510450849978337,0.4046311234222,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,3.19284957663538,0.211107635297664,0,0,0,2.21310859268678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00355669041231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,1.78843150532691,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,0,1.10961172300523,0,0.50313580350515,0,5.49216164152617,1.81477108515887,0.15543720058278,0.295710299979268,0,1.79921244865442,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,2.76158925377761,3.49698769298611,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:114248448..114248459,- | |short_description=p@chrX:114248448..114248459,- | ||
}} | }} |
Latest revision as of 05:09, 1 August 2015
Short description: | p@chrX:114248448..114248459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:114248448..114248459, - |
Coexpression cluster: | C4845_nasal_mesenchymal_Small_Alveolar_Smooth_Mammary_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.18e-15 | 8 |
fibroblast of dermis | 6.74e-12 | 6 |
uterine smooth muscle cell | 2.04e-09 | 1 |
cardiac mesenchymal cell | 7.29e-09 | 4 |
migratory trunk neural crest cell | 7.29e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.06e-13 | 14 |
dermis | 4.22e-08 | 9 |
dermatome | 4.22e-08 | 9 |
future dermis | 4.22e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 5.75e-09 | 1 |
skin benign neoplasm | 5.75e-09 | 1 |
integumentary system benign neoplasm | 5.75e-09 | 1 |
dermis tumor | 5.75e-09 | 1 |
cutaneous fibrous histiocytoma | 5.75e-09 | 1 |