FFCP PHASE1:Hg19::chr1:156051811..156051838,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92312 | |EntrezGene=92312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33482 | |HGNC=33482 | ||
|TSSclassifier=strong | |||
|UniProt=A1L020 | |UniProt=A1L020 | ||
|association_with_transcript=-22bp_to_ENST00000532414,NM_001093725,uc001fnd.3_5end | |association_with_transcript=-22bp_to_ENST00000532414,NM_001093725,uc001fnd.3_5end | ||
|cluster_id=chr1:156051811..156051838,- | |||
|coexpression_cluster_id=C1814 | |coexpression_cluster_id=C1814 | ||
|description=CAGE_peak_3_at_MEX3A_5end | |description=CAGE_peak_3_at_MEX3A_5end | ||
|id=chr1:156051811..156051838,- | |id=chr1:156051811..156051838,- | ||
|ontology_enrichment_celltype=CL:0002319;1.10e-30;25!CL:0000540;4.38e-22;6!CL:0000404;4.38e-22;6!CL:0002322;2.12e-19;5!CL:0002321;8.87e-15;15!CL:0000128;2.41e-12;7!CL:0000126;2.41e-12;7!CL:0000127;2.41e-12;7!CL:0002605;2.61e-11;3!CL:0000095;1.37e-10;17!CL:0000047;8.22e-09;2!CL:0000123;5.25e-08;2!CL:0000242;5.25e-08;2!CL:0000333;5.99e-07;5!CL:0000243;7.01e-07;15!CL:0000125;7.01e-07;15 | |ontology_enrichment_celltype=CL:0002319!1.22e-21!25;CL:0000133!7.69e-17!59;CL:0000095!4.87e-13!17;CL:0000123!4.87e-13!17;CL:0000221!5.89e-12!71;CL:0000243!4.44e-11!15;CL:0000125!4.44e-11!15;CL:0000030!4.44e-11!15;CL:0000339!4.44e-11!15;CL:0000047!1.42e-10!8;CL:0002321!5.06e-09!248;CL:0000333!6.07e-09!41;CL:0000540!2.86e-08!6;CL:0000031!2.86e-08!6;CL:0000404!2.86e-08!6;CL:0000220!3.21e-08!246;CL:0000128!3.77e-08!7;CL:0000126!3.77e-08!7;CL:0000127!3.77e-08!7;CL:0002453!3.77e-08!7;CL:0002322!2.30e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;1.10e-30;25!CL:0000540;4.38e-22;6!CL:0000404;4.38e-22;6!CL:0002322;2.12e-19;5!CL:0002321;8.87e-15;15!CL:0000128;2.41e-12;7!CL:0000126;2.41e-12;7!CL:0000127;2.41e-12;7!CL:0002605;2.61e-11;3!CL:0000095;1.37e-10;17!CL:0000047;8.22e-09;2!CL:0000123;5.25e-08;2!CL:0000242;5.25e-08;2!CL:0000333;5.99e-07;5!CL:0000243;7.01e-07;15!CL:0000125;7.01e-07;15 | ||
|ontology_enrichment_disease=DOID:3095;1.69e-14;22!DOID:2994;1.69e-14;22!DOID:171;7.49e-09;10 | |ontology_enrichment_celltype_v019_2=CL:0002319,9.24e-31,25;CL:0000047,3.25e-29,8;CL:0000133,9.99e-26,59;CL:0000540,3.94e-22,6;CL:0000031,3.94e-22,6;CL:0000404,3.94e-22,6;CL:0000221,3.63e-20,72;CL:0002322,2.33e-19,5;CL:0000333,3.77e-13,41;CL:0000128,2.60e-12,7;CL:0000126,2.60e-12,7;CL:0000127,2.60e-12,7;CL:0002453,2.60e-12,7;CL:0002605,3.12e-11,3;CL:0000095,1.28e-10,17;CL:0000123,1.28e-10,17;CL:0000242,4.16e-08,2;CL:0000243,7.09e-07,15;CL:0000125,7.09e-07,15;CL:0000030,7.09e-07,15;CL:0000339,7.09e-07,15 | ||
|ontology_enrichment_uberon=UBERON:0000922;6.89e-12;49!UBERON:0000013;5.99e-07;5!UBERON:0002410;5.99e-07;5 | |ontology_enrichment_development_v019=CL:0000031;4.38e-22;6!CL:0000133;1.52e-14;59!CL:0000221;2.11e-08;72!CL:0000339;7.01e-07;15 | ||
|ontology_enrichment_disease=DOID:3095!1.68e-10!22;DOID:2994!1.68e-10!22;DOID:171!2.46e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.69e-14;22!DOID:2994;1.69e-14;22!DOID:171;7.49e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.94e-14,22;DOID:2994,1.94e-14,22;DOID:171,7.75e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.00e-10!94;UBERON:0001016!2.00e-10!94;UBERON:0000924!4.75e-10!173;UBERON:0006601!4.75e-10!173;UBERON:0000970!1.15e-08!20;UBERON:0007625!1.76e-08!11;UBERON:0004121!1.82e-08!169;UBERON:0005743!2.46e-08!86;UBERON:0001456!4.60e-08!21;UBERON:0002104!4.83e-08!21;UBERON:0000019!6.82e-08!19;UBERON:0000047!6.82e-08!19;UBERON:0004088!6.82e-08!19;UBERON:0003072!6.82e-08!19;UBERON:0003071!6.82e-08!19;UBERON:0004128!6.82e-08!19;UBERON:0000922!8.58e-08!612;UBERON:0000119!1.07e-07!312;UBERON:0000020!5.69e-07!23;UBERON:0000483!6.07e-07!309;UBERON:0001017!8.55e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.89e-12;49!UBERON:0000013;5.99e-07;5!UBERON:0002410;5.99e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.26e-12,89;UBERON:0004121,3.05e-11,171;UBERON:0000924,3.05e-11,171;UBERON:0006601,3.05e-11,171;UBERON:0001017,4.75e-10,81;UBERON:0000013,6.12e-07,5;UBERON:0002410,6.12e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0.662794751455832,0.672325146451775,0,0,0,2.46242116153576,0.612002073732759,1.56727360739044,2.0036519099174,3.42186062682211,2.51085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,1.41802225746102,0.221729397462564,0.966182642624386,0,0,0,0,0,0,0,0,0,0.79504962946682,0,0,0,0,0,0.208994966536811,0,0,0,2.01414658554573,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0.269421344139376,0,0.756787138224657,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0.718618141816238,0.673344455816265,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,7.07447495551653,8.48190517257506,7.78499417225773,10.4697665565524,7.0649838245176,6.56959246336494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0.343135620597051,0,0,0,0,0,0,1.44331342025273,2.78232971940184,0.70445216541493,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.36874410245144,9.10978977003352,4.63973287666617,14.406398818754,7.65526501983796,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0.587403472388222,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0.184161977871793,0,0.182091168006717,0,0.451199612907412,0.231046011313244,1.56869953835371,1.46139224653261,0.316654886678627,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0.895499018888713,0,0,0.256450125116389,1.64007322849853,0.650756789328606,0,0.0915694648183434,0.247528499761764,0,0,0,0.773365746336976,0,0.307007349452259,0.137836572484531,0.322260734604821,0.145016693914229,0.255679882248303,0.534192213880424,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0.855877976067841,0.318203247925937,0.78494864019923,0,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49553699578462,1.92495971052672,0,0.185803175125719,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0.844501632511974,0,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,5.98841394003583,0,0,0,0,0.508507300585533,0,0.689486746482929,0,0.868124974666461,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0.141353071433941,0.649165919226273,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,21.4250933141343,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0,0,2.56148591426813,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0.0801588202515337,0,0,0,0.343609788497747,0,0,0,0,0.407712618220842,0.418411385249333,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0.157566364614447,0.164831716762333,0.202210631562555,0,0,0,0.136203406111576,3.69732241469544,6.05173521027829,2.49264202817511,0,0,0,0,0,2.46536564234491,0.633602019116439,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0.124192805882767,3.87376177821446,0,0,0,0,1.87333962322753,4.92731497276806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,2.68578179737669,3.12691953050377,0.943595651135378,2.18419276384028,0.509197589862076,8.92814664427068,2.23084375666204,0,0.318004350653419,0.157723490002507,0.80057074828547,1.05802783107205,0,0.128458450192919,0,0,0,15.8805168619682,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.0675375846183947,0,0,0,12.580420607419,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0.142953088353313,0.632054446930906,0,4.34645680756449,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.335566295393377,0,0,0,0,0,0.971421986118279,0,3.97901550322736,0.356760272332706,1.35535298446752,0.989464650708862,0.150962843566674,0,0.218559560503957,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0,1.89325874631822,0.135982980381829,17.4540276136151,0.5290268405154,0,0,0,3.65882632021729,7.10226217764021,2.02717601618299,0.917899467677836,7.74930475270125,0.827054095813604,1.253537696461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| ||
|short_description=p3@MEX3A | |short_description=p3@MEX3A | ||
}} | }} |
Latest revision as of 14:36, 17 September 2015
Short description: | p3@MEX3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MEX3A_5end |
Coexpression cluster: | C1814_occipital_temporal_duodenum_parietal_Neurons_brain_Neural |
Association with transcript: | -22bp_to_ENST00000532414, NM_001093725, uc001fnd.3_5end |
EntrezGene: | MEX3A |
HGNC: | 33482 |
UniProt: | A1L020 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.24e-31 | 25 |
neuronal stem cell | 3.25e-29 | 8 |
neurectodermal cell | 9.99e-26 | 59 |
neuron | 3.94e-22 | 6 |
neuroblast | 3.94e-22 | 6 |
electrically signaling cell | 3.94e-22 | 6 |
ectodermal cell | 3.63e-20 | 72 |
embryonic stem cell | 2.33e-19 | 5 |
migratory neural crest cell | 3.77e-13 | 41 |
oligodendrocyte | 2.60e-12 | 7 |
macroglial cell | 2.60e-12 | 7 |
astrocyte | 2.60e-12 | 7 |
oligodendrocyte precursor cell | 2.60e-12 | 7 |
astrocyte of the cerebral cortex | 3.12e-11 | 3 |
neuron associated cell | 1.28e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 1.28e-10 | 17 |
Merkel cell | 4.16e-08 | 2 |
glial cell (sensu Vertebrata) | 7.09e-07 | 15 |
glial cell | 7.09e-07 | 15 |
glioblast | 7.09e-07 | 15 |
glioblast (sensu Vertebrata) | 7.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.26e-12 | 89 |
ectoderm-derived structure | 3.05e-11 | 171 |
ectoderm | 3.05e-11 | 171 |
presumptive ectoderm | 3.05e-11 | 171 |
central nervous system | 4.75e-10 | 81 |
sympathetic nervous system | 6.12e-07 | 5 |
autonomic nervous system | 6.12e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.94e-14 | 22 |
germ cell cancer | 1.94e-14 | 22 |
neuroectodermal tumor | 7.75e-09 | 10 |