FFCP PHASE1:Hg19::chr10:96522413..96522424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1557 | |EntrezGene=1557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2621 | |HGNC=2621 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000480405_5end | |association_with_transcript=-13bp_to_ENST00000480405_5end | ||
|cluster_id=chr10:96522413..96522424,+ | |||
|coexpression_cluster_id=C211 | |coexpression_cluster_id=C211 | ||
|description=CAGE_peak_2_at_CYP2C19_5end | |description=CAGE_peak_2_at_CYP2C19_5end | ||
|id=chr10:96522413..96522424,+ | |id=chr10:96522413..96522424,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000181!5.73e-10!12;CL:0000417!5.73e-10!12;CL:0000668!5.73e-10!12;CL:0000414!5.73e-10!12;CL:0000412!5.73e-10!12;CL:0000182!5.73e-10!12 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002108;2.46e-30;4!UBERON:0000160;4.41e-15;17!UBERON:0002107;2.45e-14;19!UBERON:0006925;2.45e-14;19!UBERON:0005409;7.05e-12;22!UBERON:0002423;5.63e-11;25!UBERON:0002365;7.78e-09;31!UBERON:0002330;7.78e-09;31!UBERON:0001007;6.94e-08;81!UBERON:0002368;1.76e-07;33!UBERON:0004921;5.22e-07;33!UBERON:0002114;8.62e-07;2 | |ontology_enrichment_development_v019=UBERON:0004161;5.89e-07;11 | ||
|ontology_enrichment_disease=DOID:3493!2.12e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.27e-17!25;UBERON:0000015!1.27e-17!25;UBERON:0002423!1.27e-17!25;UBERON:0006235!1.27e-17!25;UBERON:0004161!1.27e-17!25;UBERON:0002107!1.97e-16!19;UBERON:0006925!1.97e-16!19;UBERON:0008836!1.97e-16!19;UBERON:0008835!3.44e-14!22;UBERON:0003894!3.44e-14!22;UBERON:0009854!1.43e-13!23;UBERON:0007499!1.75e-12!25;UBERON:0005057!5.29e-12!26;UBERON:0009856!5.29e-12!26;UBERON:0002365!4.67e-10!31;UBERON:0002330!4.67e-10!31;UBERON:0002368!6.73e-09!35;UBERON:0002108!4.12e-08!14;UBERON:0003929!5.52e-08!54;UBERON:0005172!7.84e-08!55;UBERON:0005173!7.84e-08!55;UBERON:0000160!1.98e-07!27;UBERON:0002417!5.04e-07!61;UBERON:0000916!5.04e-07!61;UBERON:0000949!6.76e-07!45;UBERON:0001007!8.77e-07!155;UBERON:0001555!8.77e-07!155;UBERON:0007026!8.77e-07!155;UBERON:0004921!9.06e-07!129;UBERON:0004185!9.06e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.46e-30;4!UBERON:0000160;4.41e-15;17!UBERON:0002107;2.45e-14;19!UBERON:0006925;2.45e-14;19!UBERON:0005409;7.05e-12;22!UBERON:0002423;5.63e-11;25!UBERON:0002365;7.78e-09;31!UBERON:0002330;7.78e-09;31!UBERON:0001007;6.94e-08;81!UBERON:0002368;1.76e-07;33!UBERON:0004921;5.22e-07;33!UBERON:0002114;8.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.86e-30,4;UBERON:0000160,4.74e-15,17;UBERON:0002107,2.45e-14,19;UBERON:0006925,2.45e-14,19;UBERON:0008836,2.45e-14,19;UBERON:0008835,1.98e-12,22;UBERON:0003894,1.98e-12,22;UBERON:0009854,6.66e-12,23;UBERON:0007499,5.63e-11,25;UBERON:0009497,5.63e-11,25;UBERON:0000015,5.63e-11,25;UBERON:0002423,5.63e-11,25;UBERON:0006235,5.63e-11,25;UBERON:0004161,5.63e-11,25;UBERON:0009856,1.45e-10,26;UBERON:0005409,1.60e-10,25;UBERON:0002365,6.60e-09,31;UBERON:0002330,6.60e-09,31;UBERON:0004921,2.37e-08,118;UBERON:0002368,6.44e-08,35;UBERON:0002114,8.62e-07,2 | |||
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|short_description=p2@CYP2C19 | |short_description=p2@CYP2C19 | ||
}} | }} |
Latest revision as of 02:35, 20 September 2015
Short description: | p2@CYP2C19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYP2C19_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -13bp_to_ENST00000480405_5end |
EntrezGene: | CYP2C19 |
HGNC: | 2621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.86e-30 | 4 |
intestine | 4.74e-15 | 17 |
liver | 2.45e-14 | 19 |
digestive gland | 2.45e-14 | 19 |
liver bud | 2.45e-14 | 19 |
hepatic diverticulum | 1.98e-12 | 22 |
liver primordium | 1.98e-12 | 22 |
digestive tract diverticulum | 6.66e-12 | 23 |
epithelial sac | 5.63e-11 | 25 |
epithelium of foregut-midgut junction | 5.63e-11 | 25 |
anatomical boundary | 5.63e-11 | 25 |
hepatobiliary system | 5.63e-11 | 25 |
foregut-midgut junction | 5.63e-11 | 25 |
septum transversum | 5.63e-11 | 25 |
sac | 1.45e-10 | 26 |
gastrointestinal system | 1.60e-10 | 25 |
exocrine gland | 6.60e-09 | 31 |
exocrine system | 6.60e-09 | 31 |
subdivision of digestive tract | 2.37e-08 | 118 |
endocrine gland | 6.44e-08 | 35 |
duodenum | 8.62e-07 | 2 |