FFCP PHASE1:Hg19::chr2:47601035..47601052,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=121bp_to_ENST00000490733_5end | |association_with_transcript=121bp_to_ENST00000490733_5end | ||
|cluster_id=chr2:47601035..47601052,+ | |||
|coexpression_cluster_id=C1908 | |coexpression_cluster_id=C1908 | ||
|description=CAGE_peak_10_at_EPCAM_5end | |description=CAGE_peak_10_at_EPCAM_5end | ||
|id=chr2:47601035..47601052,+ | |id=chr2:47601035..47601052,+ | ||
|ontology_enrichment_celltype=CL:0000313;1.21e-09;1!CL:0002553;3.39e-09;1!CL:0002076;4.47e-07;42 | |ontology_enrichment_celltype=CL:0000066!1.91e-15!254;CL:0000039!4.06e-10!7;CL:0000586!4.06e-10!7;CL:0000223!1.14e-08!59;CL:0002322!3.76e-08!5;CL:0002076!2.24e-07!43 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;1.21e-09;1!CL:0002553;3.39e-09;1!CL:0002076;4.47e-07;42 | ||
|ontology_enrichment_disease=DOID:299;4.82e-11;25!DOID:2152;1.21e-09;1!DOID:120;2.84e-07;27!DOID:193;9.31e-07;29 | |ontology_enrichment_celltype_v019_2=CL:0000313,1.32e-09,1;CL:0002553,2.77e-09,1;CL:0002076,1.18e-08,42 | ||
|ontology_enrichment_uberon=UBERON:0005409;2.16e-16;22!UBERON:0000160;9.82e-16;17!UBERON:0002108;2.20e-15;4!UBERON:0004921;1.49e-11;33!UBERON:0004911;1.21e-09;1 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.46e-29!106;DOID:0050687!1.69e-21!143;DOID:299!2.02e-11!25;DOID:162!1.54e-10!235;DOID:14566!5.58e-10!239;DOID:1749!1.65e-09!14;DOID:3119!5.19e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.82e-11;25!DOID:2152;1.21e-09;1!DOID:120;2.84e-07;27!DOID:193;9.31e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:299,5.49e-11,25;DOID:2152,1.32e-09,1;DOID:305,8.85e-09,106;DOID:120,3.23e-07,27;DOID:0050687,3.95e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!7.63e-11!155;UBERON:0001555!7.63e-11!155;UBERON:0007026!7.63e-11!155;UBERON:0004119!5.48e-10!169;UBERON:0000925!5.48e-10!169;UBERON:0006595!5.48e-10!169;UBERON:0004921!1.21e-09!129;UBERON:0004185!1.21e-09!129;UBERON:0005409!2.81e-09!35;UBERON:0000160!1.04e-08!27;UBERON:0000466!4.37e-08!126;UBERON:0003135!1.52e-07!11;UBERON:0005911!1.66e-07!82;UBERON:0003101!2.99e-07!22;UBERON:0000079!2.99e-07!22;UBERON:0000464!4.92e-07!104;UBERON:0000058!4.94e-07!26;UBERON:0005153!7.03e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.16e-16;22!UBERON:0000160;9.82e-16;17!UBERON:0002108;2.20e-15;4!UBERON:0004921;1.49e-11;33!UBERON:0004911;1.21e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.46e-16,17;UBERON:0002108,3.01e-15,4;UBERON:0005409,1.78e-14,25;UBERON:0004911,1.32e-09,1;UBERON:0004921,1.13e-07,118;UBERON:0001007,5.08e-07,145;UBERON:0001555,5.08e-07,145;UBERON:0007026,5.08e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.795178609928912,0.69716365721711,0.518305275076852,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77976734060731,0,0,0,0,0,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0.844501632511974,0.398495976502139,0.552567831062295,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,3.55955110409873,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.269272933229316,1.4124158349861,0,0,0,0,0,0,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,1.14262965711403,0.424059214301822,0,1.99052386215701,0.442287822516696,3.05515072466813,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,3.62972148145992,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,3.99187398170801,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.586654148204409,0.240476460754601,0,0.19980960958213,1.87317542300338,0,0.343189995723929,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0.551482276150566,0.576911008668165,0.13480708770837,0.0984274815147488,0,0,0,0.643012593860077,0.825236619583403,2.49264202817511,0.674921674654501,0,0,0,0.472834243795189,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.924205329202706,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0,0,2.42748612515231,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0.354581522651905,0.333694205676207,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,1.14553434272025,0,0,3.13195209033819,0.588901401691458,0.853425474875886,0,0,0,0,1.40363678077263,0.994753875806841,0,0.5647304101948,0,1.50962843566674,1.00326405540328,4.80831033108706,9.87666322359198,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0.240724100067505,0,0.917458566809082,0,0,0,0.872701380680755,6.34832208618481,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.36757959813938,1.50424523575425,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0.12729431655633,1.81905470062397,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0.628776414746108,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.795178609928912,0.69716365721711,0.518305275076852,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77976734060731,0,0,0,0,0,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0.844501632511974,0.398495976502139,0.552567831062295,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,3.55955110409873,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.269272933229316,1.4124158349861,0,0,0,0,0,0,0.225595660617181,0,0,0,0.158936578980379,0.210998064528027,1.14262965711403,0.424059214301822,0,1.99052386215701,0.442287822516696,3.05515072466813,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,3.62972148145992,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,3.99187398170801,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0.586654148204409,0.240476460754601,0,0.19980960958213,1.87317542300338,0,0.343189995723929,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0.551482276150566,0.576911008668165,0.13480708770837,0.0984274815147488,0,0,0,0.643012593860077,0.825236619583403,2.49264202817511,0.674921674654501,0,0,0,0.472834243795189,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.924205329202706,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0,0,2.42748612515231,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0.354581522651905,0.333694205676207,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,1.14553434272025,0,0,3.13195209033819,0.588901401691458,0.853425474875886,0,0,0,0,1.40363678077263,0.994753875806841,0,0.5647304101948,0,1.50962843566674,1.00326405540328,4.80831033108706,9.87666322359198,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0.240724100067505,0,0.917458566809082,0,0,0,0.872701380680755,6.34832208618481,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.36757959813938,1.50424523575425,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0.12729431655633,1.81905470062397,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0.628776414746108,0,0,0.813792356631477,0,0,0 | ||
|short_description=p10@EPCAM | |short_description=p10@EPCAM | ||
}} | }} |
Latest revision as of 12:15, 17 September 2015
Short description: | p10@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EPCAM_5end |
Coexpression cluster: | C1908_smallcell_endometrioid_small_colon_temporal_iPS_duodenum |
Association with transcript: | 121bp_to_ENST00000490733_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.32e-09 | 1 |
lung fibroblast | 2.77e-09 | 1 |
endo-epithelial cell | 1.18e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.46e-16 | 17 |
small intestine | 3.01e-15 | 4 |
gastrointestinal system | 1.78e-14 | 25 |
epithelium of female gonad | 1.32e-09 | 1 |
subdivision of digestive tract | 1.13e-07 | 118 |
digestive system | 5.08e-07 | 145 |
digestive tract | 5.08e-07 | 145 |
primitive gut | 5.08e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 5.49e-11 | 25 |
ovary epithelial cancer | 1.32e-09 | 1 |
carcinoma | 8.85e-09 | 106 |
female reproductive organ cancer | 3.23e-07 | 27 |
cell type cancer | 3.95e-07 | 143 |