FFCP PHASE1:Hg19::chr10:78900371..78900394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:78900371..78900394,- | |||
|coexpression_cluster_id=C100 | |coexpression_cluster_id=C100 | ||
|description=CAGE_peak_at_chr10:78900371..78900394,- | |description=CAGE_peak_at_chr10:78900371..78900394,- | ||
|id=chr10:78900371..78900394,- | |id=chr10:78900371..78900394,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:2355;9.85e-34;1!DOID:74;1.27e-17;2!DOID:1287;1.70e-09;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001905;1.45e-66;2!UBERON:0002757;1.45e-66;2!UBERON:0010134;1.45e-66;2!UBERON:0005408;1.45e-66;2!UBERON:0001899;1.45e-66;2!UBERON:0003296;5.98e-34;4!UBERON:0010133;5.98e-34;4!UBERON:0002784;5.98e-34;4!UBERON:0001894;6.48e-20;7!UBERON:0000966;6.78e-08;5!UBERON:0005388;6.78e-08;5!UBERON:0001802;6.78e-08;5!UBERON:0000970;1.42e-07;20!UBERON:0002104;2.95e-07;21 | |ontology_enrichment_development_v019=UBERON:0003056;2.74e-12;3 | ||
|ontology_enrichment_disease=DOID:2355!3.28e-23!1;DOID:74!2.59e-12!2;DOID:1287!8.61e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:2355;9.85e-34;1!DOID:74;1.27e-17;2!DOID:1287;1.70e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.85e-34,1;DOID:74,1.27e-17,2;DOID:1287,1.70e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.19e-45!2;UBERON:0002757!3.19e-45!2;UBERON:0010134!3.19e-45!2;UBERON:0002784!3.19e-45!2;UBERON:0005408!3.19e-45!2;UBERON:0001899!3.19e-45!2;UBERON:0003296!3.29e-23!4;UBERON:0010133!3.29e-23!4;UBERON:0001894!1.02e-13!7;UBERON:0006222!1.02e-13!7;UBERON:0002106!1.51e-08!3;UBERON:0004854!1.51e-08!3;UBERON:0009034!1.51e-08!3;UBERON:0002095!1.51e-08!3;UBERON:0004782!1.51e-08!3;UBERON:0003281!1.51e-08!3;UBERON:0009664!1.51e-08!3;UBERON:0002296!1.51e-08!3;UBERON:0005602!1.51e-08!3;UBERON:0001179!1.51e-08!3;UBERON:0006293!1.51e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.45e-66;2!UBERON:0002757;1.45e-66;2!UBERON:0010134;1.45e-66;2!UBERON:0005408;1.45e-66;2!UBERON:0001899;1.45e-66;2!UBERON:0003296;5.98e-34;4!UBERON:0010133;5.98e-34;4!UBERON:0002784;5.98e-34;4!UBERON:0001894;6.48e-20;7!UBERON:0000966;6.78e-08;5!UBERON:0005388;6.78e-08;5!UBERON:0001802;6.78e-08;5!UBERON:0000970;1.42e-07;20!UBERON:0002104;2.95e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.45e-66,2;UBERON:0002757,1.45e-66,2;UBERON:0010134,1.45e-66,2;UBERON:0005408,1.45e-66,2;UBERON:0001899,1.45e-66,2;UBERON:0003296,5.98e-34,4;UBERON:0010133,5.98e-34,4;UBERON:0002784,5.98e-34,4;UBERON:0001894,6.48e-20,7;UBERON:0006222,6.48e-20,7;UBERON:0000970,2.95e-07,21;UBERON:0002104,2.95e-07,21;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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|short_description=p@chr10:78900371..78900394,- | |short_description=p@chr10:78900371..78900394,- | ||
}} | }} |
Latest revision as of 15:46, 23 July 2015
Short description: | p@chr10:78900371..78900394, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:78900371..78900394, - |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.45e-66 | 2 |
regional part of epithalamus | 1.45e-66 | 2 |
secretory circumventricular organ | 1.45e-66 | 2 |
circumventricular organ | 1.45e-66 | 2 |
epithalamus | 1.45e-66 | 2 |
gland of diencephalon | 5.98e-34 | 4 |
neuroendocrine gland | 5.98e-34 | 4 |
regional part of diencephalon | 5.98e-34 | 4 |
diencephalon | 6.48e-20 | 7 |
future diencephalon | 6.48e-20 | 7 |
eye | 2.95e-07 | 21 |
visual system | 2.95e-07 | 21 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.85e-34 | 1 |
hematopoietic system disease | 1.27e-17 | 2 |
cardiovascular system disease | 1.70e-09 | 4 |