FFCP PHASE1:Hg19::chr1:153584619..153584630,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153584619..153584630,-
|short_description=p@chr1:153584619..153584630,-
|description=CAGE_peak_at_chr1:153584619..153584630,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:153584619..153584630,- | |||
|description=CAGE_peak_at_chr1:153584619..153584630,- | |||
|id=chr1:153584619..153584630,- | |||
|ontology_enrichment_celltype=CL:0000220!3.01e-09!246;CL:0002321!5.21e-09!248;CL:0002076!2.42e-08!43;CL:0000055!4.55e-08!180;CL:0002595!6.90e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.09e-09;3!CL:0002076;2.44e-09;42!CL:0002328;2.80e-09;3!CL:0002621;5.27e-09;3!CL:0002581;8.51e-08;1!CL:0002368;1.01e-07;13!CL:0000222;2.27e-07;1!CL:0002327;5.88e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.76e-10,42;CL:0002623,1.10e-09,3;CL:0002621,3.38e-09,3;CL:0002328,3.82e-09,3;CL:0002581,7.50e-08,1;CL:0002368,1.20e-07,13;CL:0000223,3.45e-07,58;CL:0002327,4.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.27e-07;1!UBERON:0010115;2.27e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;8.51e-08;1!DOID:3149;8.51e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.54e-08,1;DOID:3149,8.54e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.77e-09!365;UBERON:0000914!4.01e-09!83;UBERON:0002329!4.01e-09!83;UBERON:0003077!4.01e-09!83;UBERON:0003059!4.01e-09!83;UBERON:0007282!4.01e-09!83;UBERON:0009618!4.01e-09!83;UBERON:0007285!4.01e-09!83;UBERON:0000486!5.75e-09!82;UBERON:0000165!7.37e-08!28;UBERON:0000930!7.37e-08!28;UBERON:0001444!7.57e-08!48;UBERON:0000119!3.23e-07!312;UBERON:0000166!4.16e-07!21;UBERON:0000033!4.33e-07!123;UBERON:0003102!5.69e-07!95;UBERON:0007196!6.32e-07!14;UBERON:0001558!6.32e-07!14;UBERON:0003834!6.90e-07!5;UBERON:0001533!6.90e-07!5;UBERON:0000483!8.40e-07!309;UBERON:0004573!8.61e-07!33;UBERON:0004571!8.61e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.80e-09;3!UBERON:0002031;2.80e-09;3!UBERON:0001949;5.27e-09;3!UBERON:0002363;2.27e-07;1!UBERON:0001911;5.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.38e-09,3;UBERON:0004815,3.82e-09,3;UBERON:0002031,3.82e-09,3;UBERON:0002363,3.01e-07,1;UBERON:0007645,3.01e-07,1;UBERON:0007647,3.01e-07,1;UBERON:0010115,3.01e-07,1;UBERON:0001911,4.92e-07,4;UBERON:0005333,4.92e-07,4;UBERON:0008425,4.92e-07,4;UBERON:0005311,4.92e-07,4;UBERON:0000166,5.82e-07,22 | |||
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| ||
|short_description=p@chr1:153584619..153584630,- | |||
}} | }} |
Latest revision as of 21:47, 27 July 2015
Short description: | p@chr1:153584619..153584630, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153584619..153584630, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.76e-10 | 42 |
acinar cell of salivary gland | 1.10e-09 | 3 |
gingival epithelial cell | 3.38e-09 | 3 |
bronchial epithelial cell | 3.82e-09 | 3 |
perirenal preadipocyte | 7.50e-08 | 1 |
respiratory epithelial cell | 1.20e-07 | 13 |
endodermal cell | 3.45e-07 | 58 |
mammary gland epithelial cell | 4.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.38e-09 | 3 |
lower respiratory tract epithelium | 3.82e-09 | 3 |
epithelium of bronchus | 3.82e-09 | 3 |
dura mater | 3.01e-07 | 1 |
future meninx | 3.01e-07 | 1 |
ectomeninx | 3.01e-07 | 1 |
future dura mater | 3.01e-07 | 1 |
mammary gland | 4.92e-07 | 4 |
mammary bud | 4.92e-07 | 4 |
mammary ridge | 4.92e-07 | 4 |
mammary placode | 4.92e-07 | 4 |
oral opening | 5.82e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.54e-08 | 1 |
keratoacanthoma | 8.54e-08 | 1 |