FFCP PHASE1:Hg19::chr1:153958841..153958858,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153958841..153958858,-
|short_description=p3@RAB13
|description=CAGE_peak_3_at_RAB13_5end
|association_with_transcript=-7bp_to_ENST00000495720_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5872 | |EntrezGene=5872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9762 | |HGNC=9762 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000495720_5end | |||
|cluster_id=chr1:153958841..153958858,- | |||
|description=CAGE_peak_3_at_RAB13_5end | |||
|id=chr1:153958841..153958858,- | |||
|ontology_enrichment_celltype=CL:0000055!1.86e-12!180;CL:0000680!1.63e-07!57;CL:0000056!1.63e-07!57;CL:0000355!1.63e-07!57;CL:0000183!2.24e-07!59;CL:0000187!4.96e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.90e-08,58;CL:0000056,5.90e-08,58;CL:0000355,5.90e-08,58;CL:0000187,1.82e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.39e-10!216;UBERON:0003104!1.92e-08!238;UBERON:0009142!1.92e-08!238;UBERON:0000914!5.34e-08!83;UBERON:0002329!5.34e-08!83;UBERON:0003077!5.34e-08!83;UBERON:0003059!5.34e-08!83;UBERON:0007282!5.34e-08!83;UBERON:0009618!5.34e-08!83;UBERON:0007285!5.34e-08!83;UBERON:0002385!8.50e-08!63;UBERON:0001015!8.50e-08!63;UBERON:0000383!8.50e-08!63;UBERON:0004290!1.11e-07!70;UBERON:0001134!1.17e-07!61;UBERON:0002036!1.17e-07!61;UBERON:0003082!1.17e-07!61;UBERON:0000486!3.08e-07!82;UBERON:0000468!6.39e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.24e-07;31!UBERON:0001015;8.24e-07;31!UBERON:0000383;8.24e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.87e-09,199;UBERON:0002385,3.13e-08,64;UBERON:0001015,3.13e-08,64;UBERON:0000383,3.13e-08,64;UBERON:0002329,4.24e-08,71;UBERON:0003059,4.24e-08,71;UBERON:0007282,4.24e-08,71;UBERON:0004290,4.24e-08,71;UBERON:0009618,4.24e-08,71;UBERON:0001134,4.29e-08,62;UBERON:0002036,4.29e-08,62;UBERON:0003082,4.29e-08,62;UBERON:0003104,4.77e-08,160;UBERON:0009142,4.77e-08,160;UBERON:0007524,6.54e-08,73;UBERON:0003077,8.59e-08,72;UBERON:0007285,8.59e-08,72;UBERON:0000486,1.27e-07,83;UBERON:0007503,2.58e-07,78;UBERON:0005256,4.06e-07,122 | |||
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| ||
|short_description=p3@RAB13 | |||
}} | }} |
Latest revision as of 08:15, 17 September 2015
Short description: | p3@RAB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB13_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000495720_5end |
EntrezGene: | RAB13 |
HGNC: | 9762 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.90e-08 | 58 |
myoblast | 5.90e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.90e-08 | 58 |
muscle cell | 1.82e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.87e-09 | 199 |
muscle tissue | 3.13e-08 | 64 |
musculature | 3.13e-08 | 64 |
musculature of body | 3.13e-08 | 64 |
somite | 4.24e-08 | 71 |
presomitic mesoderm | 4.24e-08 | 71 |
presumptive segmental plate | 4.24e-08 | 71 |
dermomyotome | 4.24e-08 | 71 |
trunk paraxial mesoderm | 4.24e-08 | 71 |
skeletal muscle tissue | 4.29e-08 | 62 |
striated muscle tissue | 4.29e-08 | 62 |
myotome | 4.29e-08 | 62 |
mesenchyme | 4.77e-08 | 160 |
entire embryonic mesenchyme | 4.77e-08 | 160 |
dense mesenchyme tissue | 6.54e-08 | 73 |
paraxial mesoderm | 8.59e-08 | 72 |
presumptive paraxial mesoderm | 8.59e-08 | 72 |
multilaminar epithelium | 1.27e-07 | 83 |
epithelial vesicle | 2.58e-07 | 78 |
trunk mesenchyme | 4.06e-07 | 122 |