FFCP PHASE1:Hg19::chr12:44467410..44467418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84216 | |EntrezGene=84216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25308 | |HGNC=25308 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000550623_5end | |association_with_transcript=-35bp_to_ENST00000550623_5end | ||
|cluster_id=chr12:44467410..44467418,+ | |||
|coexpression_cluster_id=C160 | |coexpression_cluster_id=C160 | ||
|description=CAGE_peak_13_at_TMEM117_5end | |description=CAGE_peak_13_at_TMEM117_5end | ||
|id=chr12:44467410..44467418,+ | |id=chr12:44467410..44467418,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002586!1.03e-46!3;CL:0000149!2.98e-35!4;CL:0000147!1.47e-10!14 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001896;8.98e-131;3!UBERON:0005290;8.98e-131;3!UBERON:0002298;2.83e-66;6!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;8.57e-09;53!UBERON:0002616;8.57e-09;53 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!7.56e-47!3;UBERON:0005290!7.56e-47!3;UBERON:0010096!7.56e-47!3;UBERON:0001781!1.03e-46!3;UBERON:0001782!1.03e-46!3;UBERON:0005424!1.03e-46!3;UBERON:0000966!2.30e-28!5;UBERON:0005388!2.30e-28!5;UBERON:0001802!2.30e-28!5;UBERON:0002298!4.69e-18!8;UBERON:0003075!1.13e-16!86;UBERON:0007284!1.13e-16!86;UBERON:0005743!1.79e-16!86;UBERON:0002336!3.07e-16!1;UBERON:0001018!3.07e-16!1;UBERON:0002473!3.07e-16!1;UBERON:0005340!3.07e-16!1;UBERON:0002316!3.07e-16!1;UBERON:0003544!3.07e-16!1;UBERON:0001020!3.07e-16!1;UBERON:0005970!3.07e-16!1;UBERON:0002437!3.07e-16!1;UBERON:0002346!6.68e-16!90;UBERON:0000073!7.31e-15!94;UBERON:0001016!7.31e-15!94;UBERON:0007625!2.83e-13!11;UBERON:0004733!2.97e-12!12;UBERON:0002028!2.97e-12!12;UBERON:0007277!2.97e-12!12;UBERON:0004732!2.34e-11!13;UBERON:0007023!6.12e-10!115;UBERON:0003076!6.39e-10!15;UBERON:0003057!6.39e-10!15;UBERON:0001049!2.87e-09!57;UBERON:0005068!2.87e-09!57;UBERON:0006241!2.87e-09!57;UBERON:0007135!2.87e-09!57;UBERON:0000033!3.89e-09!123;UBERON:0001954!5.49e-09!2;UBERON:0003022!5.49e-09!2;UBERON:0002421!5.49e-09!2;UBERON:0002600!5.49e-09!2;UBERON:0002616!5.97e-09!59;UBERON:0002360!7.49e-09!2;UBERON:0000094!7.49e-09!2;UBERON:0007645!7.49e-09!2;UBERON:0005162!8.74e-09!2;UBERON:0000122!8.74e-09!2;UBERON:0000153!1.12e-08!129;UBERON:0007811!1.12e-08!129;UBERON:0003056!1.22e-08!61;UBERON:0001017!1.90e-08!82;UBERON:0004121!5.96e-08!169;UBERON:0000019!6.32e-08!19;UBERON:0000047!6.32e-08!19;UBERON:0004088!6.32e-08!19;UBERON:0003072!6.32e-08!19;UBERON:0003071!6.32e-08!19;UBERON:0004128!6.32e-08!19;UBERON:0000924!9.54e-08!173;UBERON:0006601!9.54e-08!173;UBERON:0000970!1.48e-07!20;UBERON:0000955!1.61e-07!69;UBERON:0006238!1.61e-07!69;UBERON:0002104!3.21e-07!21;UBERON:0001456!3.21e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.98e-131;3!UBERON:0005290;8.98e-131;3!UBERON:0002298;2.83e-66;6!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;8.57e-09;53!UBERON:0002616;8.57e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.98e-131,3;UBERON:0005290,8.98e-131,3;UBERON:0010096,8.98e-131,3;UBERON:0002298,2.83e-66,6;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p13@TMEM117 | |short_description=p13@TMEM117 | ||
}} | }} |
Latest revision as of 09:10, 18 September 2015
Short description: | p13@TMEM117 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TMEM117_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -35bp_to_ENST00000550623_5end |
EntrezGene: | TMEM117 |
HGNC: | 25308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.98e-131 | 3 |
myelencephalon | 8.98e-131 | 3 |
future myelencephalon | 8.98e-131 | 3 |
brainstem | 2.83e-66 | 6 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |