FFCP PHASE1:Hg19::chr1:154832291..154832302,-: Difference between revisions
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|id=chr1:154832291..154832302,-
|short_description=p14@KCNN3
|description=CAGE_peak_14_at_KCNN3_5end
|association_with_transcript=16bp_to_ENST00000361147_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3782 | |EntrezGene=3782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6292 | |HGNC=6292 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGI6 | |UniProt=Q9UGI6 | ||
|association_with_transcript=16bp_to_ENST00000361147_5end | |||
|cluster_id=chr1:154832291..154832302,- | |||
|coexpression_cluster_id=C1464 | |||
|description=CAGE_peak_14_at_KCNN3_5end | |||
|id=chr1:154832291..154832302,- | |||
|ontology_enrichment_celltype=CL:0000945!3.11e-39!24;CL:0000826!3.11e-39!24;CL:0000542!1.29e-23!53;CL:0000051!1.29e-23!53;CL:0000838!1.64e-20!52;CL:0000819!2.16e-09!1;CL:0002087!3.84e-09!119;CL:0000738!1.94e-07!140;CL:0002031!2.59e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.64e-26;24!CL:0000542;7.30e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.79e-26,24;CL:0000826,5.79e-26,24;CL:0000838,3.26e-17,52;CL:0000542,6.82e-17,53;CL:0000051,6.82e-17,53;CL:0002087,9.22e-08,115;CL:0002031,1.93e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;7.30e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.73e-29!10;DOID:2531!1.32e-11!51;DOID:0060083!1.32e-11!51;DOID:4960!1.03e-09!1;DOID:0070004!1.03e-09!1;DOID:630!1.84e-09!1;DOID:0050177!1.84e-09!1;DOID:0050427!1.84e-09!1;DOID:0060073!2.16e-09!1;DOID:8675!2.16e-09!1;DOID:2355!2.77e-09!1;DOID:12603!3.53e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;4.06e-26;1!DOID:0070004;4.06e-26;1!DOID:0060058;4.76e-23;10!DOID:2531;2.32e-07;51!DOID:0060083;2.32e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.61e-26,1;DOID:0070004,4.61e-26,1;DOID:0060058,4.76e-23,10;DOID:2531,2.03e-12,51;DOID:0060083,2.03e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.16e-11!3;UBERON:0004854!1.16e-11!3;UBERON:0009034!1.16e-11!3;UBERON:0002095!1.16e-11!3;UBERON:0004782!1.16e-11!3;UBERON:0003281!1.16e-11!3;UBERON:0009664!1.16e-11!3;UBERON:0002296!1.16e-11!3;UBERON:0005602!1.16e-11!3;UBERON:0001179!1.16e-11!3;UBERON:0006293!1.16e-11!3;UBERON:0002372!4.87e-09!1;UBERON:0001961!4.87e-09!1;UBERON:0001744!4.87e-09!1;UBERON:0001735!4.87e-09!1;UBERON:0002363!5.28e-09!1;UBERON:0007647!5.28e-09!1;UBERON:0010115!5.28e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.41e-09,3;UBERON:0004854,1.41e-09,3;UBERON:0009034,1.41e-09,3;UBERON:0002095,1.41e-09,3;UBERON:0004782,1.41e-09,3;UBERON:0003281,1.41e-09,3;UBERON:0009664,1.41e-09,3;UBERON:0002296,1.41e-09,3;UBERON:0005602,1.41e-09,3;UBERON:0001179,1.41e-09,3;UBERON:0006293,1.41e-09,3 | |||
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|short_description=p14@KCNN3 | |||
}} | }} |
Latest revision as of 10:10, 17 September 2015
Short description: | p14@KCNN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KCNN3_5end |
Coexpression cluster: | C1464_Burkitt_myeloma_lymphangiectasia_splenic_b_xeroderma_B |
Association with transcript: | 16bp_to_ENST00000361147_5end |
EntrezGene: | KCNN3 |
HGNC: | 6292 |
UniProt: | Q9UGI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.79e-26 | 24 |
pro-B cell | 5.79e-26 | 24 |
lymphoid lineage restricted progenitor cell | 3.26e-17 | 52 |
lymphocyte | 6.82e-17 | 53 |
common lymphoid progenitor | 6.82e-17 | 53 |
nongranular leukocyte | 9.22e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.93e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.41e-09 | 3 |
gastrointestinal system mesentery | 1.41e-09 | 3 |
stomach region | 1.41e-09 | 3 |
mesentery | 1.41e-09 | 3 |
gastrointestinal system serosa | 1.41e-09 | 3 |
mesentery of stomach | 1.41e-09 | 3 |
gut mesentery | 1.41e-09 | 3 |
dorsal mesentery | 1.41e-09 | 3 |
dorsal mesogastrium | 1.41e-09 | 3 |
peritoneal cavity | 1.41e-09 | 3 |
spleen primordium | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.61e-26 | 1 |
myeloma | 4.61e-26 | 1 |
lymphoma | 4.76e-23 | 10 |
hematologic cancer | 2.03e-12 | 51 |
immune system cancer | 2.03e-12 | 51 |