FFCP PHASE1:Hg19::chr10:134331775..134331789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000455414,uc001lln.2_5end | |association_with_transcript=-80bp_to_ENST00000455414,uc001lln.2_5end | ||
|cluster_id=chr10:134331775..134331789,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_ENST00000455414_5end,CAGE_peak_2_at_uc001lln.2_5end | |description=CAGE_peak_2_at_ENST00000455414_5end,CAGE_peak_2_at_uc001lln.2_5end | ||
|id=chr10:134331775..134331789,- | |id=chr10:134331775..134331789,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002322!2.81e-07!5 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:114;8.49e-25;2!DOID:178;2.95e-13;1!DOID:326;2.95e-13;1!DOID:3978;2.95e-13;1!DOID:3394;2.95e-13;1!DOID:5844;2.95e-13;1!DOID:1287;6.64e-13;4 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0007100;2.42e-37;25!UBERON:0000948;4.25e-19;22!UBERON:0004151;3.85e-17;3!UBERON:0003978;1.13e-16;3!UBERON:0000946;1.13e-16;3!UBERON:0002079;1.61e-13;1!UBERON:0002084;1.82e-13;1!UBERON:0002082;1.82e-13;1!UBERON:0002146;2.05e-13;1!UBERON:0005623;2.05e-13;1!UBERON:0005795;7.24e-13;1!UBERON:0002135;7.24e-13;1!UBERON:0003103;2.11e-11;61!UBERON:0002081;2.15e-07;2!UBERON:0002133;4.55e-07;2 | |ontology_enrichment_development_v019=UBERON:0010227;1.61e-13;1!UBERON:0010226;1.82e-13;1!UBERON:0004140;3.76e-13;1!UBERON:0005062;9.47e-13;4!UBERON:0007284;9.47e-13;4!UBERON:0003104;2.00e-12;31 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.49e-25;2!DOID:178;2.95e-13;1!DOID:326;2.95e-13;1!DOID:3978;2.95e-13;1!DOID:3394;2.95e-13;1!DOID:5844;2.95e-13;1!DOID:1287;6.64e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.02e-25,2;DOID:178,2.95e-13,1;DOID:326,2.95e-13,1;DOID:3978,2.95e-13,1;DOID:3394,2.95e-13,1;DOID:5844,2.95e-13,1;DOID:1287,6.84e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0003103!2.20e-09!69;UBERON:0000473!4.95e-09!8;UBERON:0003135!2.26e-08!11;UBERON:0003101!2.47e-07!22;UBERON:0000079!2.47e-07!22;UBERON:0007100!7.02e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.42e-37;25!UBERON:0000948;4.25e-19;22!UBERON:0004151;3.85e-17;3!UBERON:0003978;1.13e-16;3!UBERON:0000946;1.13e-16;3!UBERON:0002079;1.61e-13;1!UBERON:0002084;1.82e-13;1!UBERON:0002082;1.82e-13;1!UBERON:0002146;2.05e-13;1!UBERON:0005623;2.05e-13;1!UBERON:0005795;7.24e-13;1!UBERON:0002135;7.24e-13;1!UBERON:0003103;2.11e-11;61!UBERON:0002081;2.15e-07;2!UBERON:0002133;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.55e-34,27;UBERON:0003103,1.16e-19,68;UBERON:0000948,1.68e-17,24;UBERON:0005498,1.68e-17,24;UBERON:0004140,1.68e-17,24;UBERON:0009881,1.68e-17,24;UBERON:0004141,1.68e-17,24;UBERON:0003084,1.68e-17,24;UBERON:0007005,1.68e-17,24;UBERON:0004139,1.68e-17,24;UBERON:0004291,1.68e-17,24;UBERON:0004151,3.85e-17,3;UBERON:0003978,1.00e-16,3;UBERON:0009751,1.00e-16,3;UBERON:0000946,1.00e-16,3;UBERON:0002523,1.00e-16,3;UBERON:0005983,1.00e-16,3;UBERON:0002165,1.00e-16,3;UBERON:0002062,1.00e-16,3;UBERON:0007280,1.00e-16,3;UBERON:0002079,1.61e-13,1;UBERON:0002084,1.82e-13,1;UBERON:0002082,1.82e-13,1;UBERON:0010226,1.82e-13,1;UBERON:0002146,2.06e-13,1;UBERON:0005623,2.06e-13,1;UBERON:0002135,6.06e-13,1;UBERON:0004797,1.09e-07,7;UBERON:0001009,1.61e-07,112;UBERON:0002081,2.15e-07,2;UBERON:0010227,2.15e-07,2;UBERON:0002133,4.17e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.265059536642971,0.813357600086629,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0.870100163485371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,1.70918513803957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0.429765441419957,0,1.39641200636127,6.41649187232714,0,3.19486400798386,5.15071257763885,5.57928643604681,2.8217058444425,0,0,0,0.247247575143499,0.0674035438541849,0.196854963029498,0,0,0,0,0.275078873194468,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,8.5763439164804,7.28301167401975,2.5426853765475,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.354581522651905,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0.790068058663633,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.513314034281235,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,0.459474497674225,1.0028301571695,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.488965776731466,1.62758471326295,0,0,0 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| ||
|short_description=p2@ENST00000455414,p2@uc001lln.2 | |short_description=p2@ENST00000455414,p2@uc001lln.2 | ||
}} | }} |
Latest revision as of 11:47, 23 July 2015
Short description: | p2@ENST00000455414, p2@uc001lln.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000455414_5end, CAGE_peak_2_at_uc001lln.2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -80bp_to_ENST00000455414, uc001lln.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.55e-34 | 27 |
compound organ | 1.16e-19 | 68 |
heart | 1.68e-17 | 24 |
primitive heart tube | 1.68e-17 | 24 |
primary heart field | 1.68e-17 | 24 |
anterior lateral plate mesoderm | 1.68e-17 | 24 |
heart tube | 1.68e-17 | 24 |
heart primordium | 1.68e-17 | 24 |
cardiac mesoderm | 1.68e-17 | 24 |
cardiogenic plate | 1.68e-17 | 24 |
heart rudiment | 1.68e-17 | 24 |
cardiac chamber | 3.85e-17 | 3 |
valve | 1.00e-16 | 3 |
cardiac mesenchyme | 1.00e-16 | 3 |
cardial valve | 1.00e-16 | 3 |
tunica intima | 1.00e-16 | 3 |
heart layer | 1.00e-16 | 3 |
endocardium | 1.00e-16 | 3 |
endocardial cushion | 1.00e-16 | 3 |
presumptive endocardium | 1.00e-16 | 3 |
left cardiac atrium | 1.61e-13 | 1 |
heart left ventricle | 1.82e-13 | 1 |
cardiac ventricle | 1.82e-13 | 1 |
future cardiac ventricle | 1.82e-13 | 1 |
pulmonary valve | 2.06e-13 | 1 |
semi-lunar valve | 2.06e-13 | 1 |
mitral valve | 6.06e-13 | 1 |
blood vessel layer | 1.09e-07 | 7 |
circulatory system | 1.61e-07 | 112 |
cardiac atrium | 2.15e-07 | 2 |
future cardiac atrium | 2.15e-07 | 2 |
atrioventricular valve | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.02e-25 | 2 |
vascular disease | 2.95e-13 | 1 |
ischemia | 2.95e-13 | 1 |
extrinsic cardiomyopathy | 2.95e-13 | 1 |
myocardial ischemia | 2.95e-13 | 1 |
myocardial infarction | 2.95e-13 | 1 |
cardiovascular system disease | 6.84e-13 | 4 |