FFCP PHASE1:Hg19::chr3:154742006..154742014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=P08473 | |UniProt=P08473 | ||
|association_with_transcript=93bp_to_ENST00000492661,uc010hvr.1_5end | |association_with_transcript=93bp_to_ENST00000492661,uc010hvr.1_5end | ||
|cluster_id=chr3:154742006..154742014,+ | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_26_at_MME_5end | |description=CAGE_peak_26_at_MME_5end | ||
|id=chr3:154742006..154742014,+ | |id=chr3:154742006..154742014,+ | ||
|ontology_enrichment_celltype=CL:0002541;1.47e-60;3!CL:0000349;3.39e-17;19!CL:0002588;3.02e-11;2!CL:0002521;6.34e-08;3 | |ontology_enrichment_celltype=CL:0002541!8.94e-16!3;CL:0002620!2.99e-11!23;CL:0002588!2.21e-10!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;1.47e-60;3!CL:0000349;3.39e-17;19!CL:0002588;3.02e-11;2!CL:0002521;6.34e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002541,1.62e-60,3;CL:0000349,3.32e-17,19;CL:0002588,2.73e-11,2;CL:0002521,6.78e-08,3 | ||
|ontology_enrichment_uberon=UBERON:0003124;1.47e-60;3!UBERON:0000920;1.47e-60;3!UBERON:0005631;3.26e-32;10!UBERON:0000158;3.26e-32;10!UBERON:0000478;7.01e-21;24!UBERON:0002190;6.34e-08;3 | |ontology_enrichment_development_v019=UBERON:0003124;4.22e-21;1 | ||
|ontology_enrichment_disease=DOID:17!1.12e-08!5;DOID:450!1.12e-08!5;DOID:66!1.12e-08!5;DOID:423!1.12e-08!5;DOID:0080000!1.12e-08!5;DOID:11722!1.12e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!8.94e-16!3;UBERON:0000920!8.94e-16!3;UBERON:0005631!3.65e-12!14;UBERON:0000158!3.65e-12!14;UBERON:0003124!1.14e-11!7;UBERON:0002199!3.02e-08!45;UBERON:0002416!3.02e-08!45;UBERON:0002097!1.35e-07!40;UBERON:0002369!4.97e-07!3;UBERON:0001235!4.97e-07!3;UBERON:0006858!4.97e-07!3;UBERON:0000478!8.28e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.47e-60;3!UBERON:0000920;1.47e-60;3!UBERON:0005631;3.26e-32;10!UBERON:0000158;3.26e-32;10!UBERON:0000478;7.01e-21;24!UBERON:0002190;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.62e-60,3;UBERON:0003124,7.06e-46,7;UBERON:0005631,1.36e-35,14;UBERON:0000158,1.36e-35,14;UBERON:0000478,6.87e-21,24;UBERON:0002190,6.78e-08,3;UBERON:0004923,1.12e-07,66 | |||
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|short_description=p26@MME | |short_description=p26@MME | ||
}} | }} |
Latest revision as of 04:34, 16 September 2015
Short description: | p26@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_MME_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 93bp_to_ENST00000492661, uc010hvr.1_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.62e-60 | 3 |
extraembryonic cell | 3.32e-17 | 19 |
smooth muscle cell of the umbilical vein | 2.73e-11 | 2 |
subcutaneous fat cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.62e-60 | 3 |
chorion | 7.06e-46 | 7 |
extraembryonic membrane | 1.36e-35 | 14 |
membranous layer | 1.36e-35 | 14 |
extraembryonic structure | 6.87e-21 | 24 |
subcutaneous adipose tissue | 6.78e-08 | 3 |
organ component layer | 1.12e-07 | 66 |