FFCP PHASE1:Hg19::chr20:3295742..3295749,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:3295742..3295749,- | |||
|coexpression_cluster_id=C458 | |coexpression_cluster_id=C458 | ||
|description=CAGE_peak_at_chr20:3295742..3295749,- | |description=CAGE_peak_at_chr20:3295742..3295749,- | ||
|id=chr20:3295742..3295749,- | |id=chr20:3295742..3295749,- | ||
|ontology_enrichment_celltype=CL:0002623;2.39e-66;3!CL:0000622;1.48e-40;5!CL:0000154;4.27e-34;6!CL:0000150;2.62e-23;9!CL:0002251;2.29e-11;20!CL:0000151;4.53e-08;36 | |ontology_enrichment_celltype=CL:0002605!7.94e-12!3;CL:0000128!7.30e-09!7;CL:0000126!7.30e-09!7;CL:0000127!7.30e-09!7;CL:0002453!7.30e-09!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0002623;2.39e-66;3!CL:0000622;1.48e-40;5!CL:0000154;4.27e-34;6!CL:0000150;2.62e-23;9!CL:0002251;2.29e-11;20!CL:0000151;4.53e-08;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.39e-66,3;CL:0000622,1.48e-40,5;CL:0000154,4.27e-34,6;CL:0000150,2.62e-23,9;CL:0002251,2.29e-11,20;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001044;4.27e-34;6!UBERON:0003293;4.27e-34;6!UBERON:0003294;4.27e-34;6!UBERON:0010047;4.27e-34;6!UBERON:0003408;4.27e-34;6!UBERON:0000167;4.27e-34;6!UBERON:0001041;1.43e-15;14!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000165;1.52e-08;28!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.46e-23!34;UBERON:0003528!7.46e-23!34;UBERON:0001049!1.04e-22!57;UBERON:0005068!1.04e-22!57;UBERON:0006241!1.04e-22!57;UBERON:0007135!1.04e-22!57;UBERON:0002616!2.02e-19!59;UBERON:0001869!1.66e-18!32;UBERON:0002791!7.26e-18!33;UBERON:0000955!1.42e-17!69;UBERON:0006238!1.42e-17!69;UBERON:0001893!2.91e-17!34;UBERON:0002780!5.39e-16!41;UBERON:0001890!5.39e-16!41;UBERON:0006240!5.39e-16!41;UBERON:0001017!9.29e-16!82;UBERON:0003080!1.53e-15!42;UBERON:0000956!5.86e-15!25;UBERON:0000203!5.86e-15!25;UBERON:0003075!6.81e-15!86;UBERON:0007284!6.81e-15!86;UBERON:0005743!8.48e-15!86;UBERON:0002346!5.26e-14!90;UBERON:0000073!6.22e-13!94;UBERON:0001016!6.22e-13!94;UBERON:0002771!1.29e-12!3;UBERON:0000033!3.19e-12!123;UBERON:0001896!3.90e-12!3;UBERON:0005290!3.90e-12!3;UBERON:0010096!3.90e-12!3;UBERON:0002298!1.63e-11!8;UBERON:0000153!2.16e-11!129;UBERON:0007811!2.16e-11!129;UBERON:0003056!3.45e-11!61;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0002619!5.02e-09!22;UBERON:0007023!6.32e-09!115;UBERON:0000025!8.37e-09!194;UBERON:0003076!1.60e-08!15;UBERON:0003057!1.60e-08!15;UBERON:0002148!3.51e-08!2;UBERON:0009662!3.51e-08!2;UBERON:0004121!3.73e-08!169;UBERON:0000924!7.75e-08!173;UBERON:0006601!7.75e-08!173;UBERON:0001950!9.87e-08!20;UBERON:0004733!1.44e-07!12;UBERON:0002028!1.44e-07!12;UBERON:0007277!1.44e-07!12;UBERON:0000477!1.89e-07!286;UBERON:0004111!3.05e-07!241;UBERON:0004732!5.83e-07!13;UBERON:0000475!6.49e-07!365;UBERON:0000483!7.06e-07!309;UBERON:0000119!9.74e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.27e-34;6!UBERON:0003293;4.27e-34;6!UBERON:0003294;4.27e-34;6!UBERON:0010047;4.27e-34;6!UBERON:0003408;4.27e-34;6!UBERON:0000167;4.27e-34;6!UBERON:0001041;1.43e-15;14!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000165;1.52e-08;28!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,4.27e-34,6;UBERON:0003293,4.27e-34,6;UBERON:0003294,4.27e-34,6;UBERON:0010047,4.27e-34,6;UBERON:0000167,4.27e-34,6;UBERON:0003408,3.81e-21,10;UBERON:0000166,1.80e-10,22;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0002365,7.41e-08,31;UBERON:0002330,7.41e-08,31;UBERON:0000161,5.81e-07,36 | |||
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| ||
|short_description=p@chr20:3295742..3295749,- | |short_description=p@chr20:3295742..3295749,- | ||
}} | }} |
Latest revision as of 13:14, 28 July 2015
Short description: | p@chr20:3295742..3295749, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:3295742..3295749, - |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.39e-66 | 3 |
acinar cell | 1.48e-40 | 5 |
protein secreting cell | 4.27e-34 | 6 |
glandular epithelial cell | 2.62e-23 | 9 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 4.27e-34 | 6 |
gland of oral region | 4.27e-34 | 6 |
gland of foregut | 4.27e-34 | 6 |
oral gland | 4.27e-34 | 6 |
oral cavity | 4.27e-34 | 6 |
gland of gut | 3.81e-21 | 10 |
oral opening | 1.80e-10 | 22 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
exocrine gland | 7.41e-08 | 31 |
exocrine system | 7.41e-08 | 31 |
orifice | 5.81e-07 | 36 |