FFCP PHASE1:Hg19::chr20:57089913..57089929,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164284 | |EntrezGene=164284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26892 | |HGNC=26892 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCL9 | |UniProt=Q8NCL9 | ||
|association_with_transcript=19bp_to_NM_153360,uc002xze.1,uc010zzp.1_5end | |association_with_transcript=19bp_to_NM_153360,uc002xze.1,uc010zzp.1_5end | ||
|cluster_id=chr20:57089913..57089929,- | |||
|coexpression_cluster_id=C4054 | |coexpression_cluster_id=C4054 | ||
|description=CAGE_peak_5_at_APCDD1L_5end | |description=CAGE_peak_5_at_APCDD1L_5end | ||
|id=chr20:57089913..57089929,- | |id=chr20:57089913..57089929,- | ||
|ontology_enrichment_celltype=CL:0000062;1.21e-08;9!CL:0000138;2.65e-08;6 | |ontology_enrichment_celltype=CL:0000055!6.41e-35!180;CL:0000057!1.14e-16!75;CL:0000680!5.12e-16!57;CL:0000056!5.12e-16!57;CL:0000355!5.12e-16!57;CL:0000183!2.36e-15!59;CL:0000187!2.42e-14!54;CL:0000192!9.63e-13!42;CL:0000514!9.63e-13!42;CL:0000393!1.06e-12!60;CL:0000211!1.06e-12!60;CL:0002620!2.12e-11!23;CL:0000048!1.73e-10!430;CL:0000034!1.83e-10!444;CL:0000359!5.50e-10!32;CL:0000723!7.12e-10!436;CL:0002540!2.69e-07!6;CL:0002371!7.60e-07!591 | ||
| | |ontology_enrichment_celltype_v019=CL:0000062;1.21e-08;9!CL:0000138;2.65e-08;6 | ||
|ontology_enrichment_disease=DOID:3307;2.34e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0000058,2.88e-08,6;CL:0000138,2.88e-08,6;CL:0000062,7.33e-07,11;CL:0000375,7.33e-07,11;CL:0000335,7.33e-07,11 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0000335;5.44e-07;11 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.35e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.40e-19!83;UBERON:0002329!1.40e-19!83;UBERON:0003077!1.40e-19!83;UBERON:0003059!1.40e-19!83;UBERON:0007282!1.40e-19!83;UBERON:0009618!1.40e-19!83;UBERON:0007285!1.40e-19!83;UBERON:0004290!7.95e-19!70;UBERON:0001134!3.76e-16!61;UBERON:0002036!3.76e-16!61;UBERON:0003082!3.76e-16!61;UBERON:0002385!4.76e-16!63;UBERON:0001015!4.76e-16!63;UBERON:0000383!4.76e-16!63;UBERON:0000486!1.15e-15!82;UBERON:0005256!1.23e-10!143;UBERON:0001637!1.82e-08!42;UBERON:0003509!1.82e-08!42;UBERON:0004572!1.82e-08!42;UBERON:0004573!2.64e-08!33;UBERON:0004571!2.64e-08!33;UBERON:0004872!1.05e-07!84;UBERON:0002097!8.23e-07!40;UBERON:0002199!9.02e-07!45;UBERON:0002416!9.02e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.07e-07,71;UBERON:0003059,1.07e-07,71;UBERON:0007282,1.07e-07,71;UBERON:0004290,1.07e-07,71;UBERON:0009618,1.07e-07,71;UBERON:0003077,1.54e-07,72;UBERON:0007285,1.54e-07,72;UBERON:0007524,2.21e-07,73 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,1.72013755551056,0,0,0,0.618831764800233,0.994192127183747,0.672325146451775,0,0,0,1.23121058076788,1.63200552995402,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,0.579386075843295,4.7717156823066,4.37971383272372,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.264818361626438,0.860509862246441,0,0.560677600142307,0,1.48000529050296,0.311211035399766,3.09834545760283,0.163461903113459,0,1.15235184896,0,1.24864030732128,1.71141546463335,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,2.87447256726495,0,0.250237039743928,0,2.19488810440419,0.919463387397059,0.901428353439581,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,8.40255069036326,0.515262646192195,1.8034837803194,0.37223371266318,1.85653965465393,0.974370051611986,0.757301322732344,0.0920498986422993,0.161646056818812,3.19508633264953,0.201504196455281,1.18692414617341,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,2.57296375277154,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,3.36106460970222,0,0,0,0,0.771622122786426,2.83698264046557,1.8649552531127,0,2.17048642156577,0.823240336780769,0.325736184293735,0,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.315404830067869,0.35142424497814,2.10662269809403,4.5481500811197,1.03473071292505,7.97070718242524,9.03408925854345,0.0868836144680828,0.391602314925481,1.71571711905428,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.574890092096664,0,0.232420756919918,0,0,0,0.68888668898764,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.863663664408557,0,0.812839312631559,0,0,1.66215201785745,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.386682873168488,1.07834031980251,0.921022048356777,0.413509717453592,0,0.290033387828457,0.255679882248303,0.623224249527161,0,0,0,0,0.929691098594572,2.51849877464512,1.3940745403212,1.84820148105653,0,0.869932992075073,0.55597265731176,0.858749320451947,0,0,0,0.255897791311334,0,1.27281299170375,0,0.359744915166629,0,0.706874414074119,0,3.17020642346017,2.10629228119491,0.48763373908959,0.243713489631284,1.05650146756755,0,2.82810863907426,0,0.551365343546124,2.65375590096488,0.438450885253763,0.578775534266688,0.655894752046633,0,0.6196469961995,5.35221644811259,0.430234056612155,0.294747123039363,0.35667105148125,0,0.633322905892992,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0.412618309791701,0,0,0,0,0,0,1.67854682031994,1.79520572082991,0,0,0.714695326373367,0,13.221963958047,0,1.72844298240254,0.326587360109409,0,0,1.19271615249795,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,4.23478475456709,0,0,1.64180283175561,0.467426619694449,0,2.84104507912634,0.754703705257725,0.889811221596536,0.228840068396924,0.302461847526478,1.24349760466224,0.73927574994817,0.955780602982214,0,1.39736661188633,0,3.98762571836992,0,2.40412174395549,0,0.406870733204662,1.45478927362048,1.8259794697223,0.464033759878494,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,2.40513409419076,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0,1.0195626881269,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,1.85997509083376,0.924351257262837,0.865253124247578,0.126166424835079,0,0,0.407955318967927,0.26721740526556,0,0,0,0,0,0,0,0.476128862927481,0,0,2.4669009767735,0,0.202117188958219,0,0,0.0673520530145875,0,0.665320713092027,0,0,3.8614456457388,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,1.72013755551056,0,0,0,0.618831764800233,0.994192127183747,0.672325146451775,0,0,0,1.23121058076788,1.63200552995402,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,0.579386075843295,4.7717156823066,4.37971383272372,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.264818361626438,0.860509862246441,0,0.560677600142307,0,1.48000529050296,0.311211035399766,3.09834545760283,0.163461903113459,0,1.15235184896,0,1.24864030732128,1.71141546463335,0.298897361103602,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,2.87447256726495,0,0.250237039743928,0,2.19488810440419,0.919463387397059,0.901428353439581,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,8.40255069036326,0.515262646192195,1.8034837803194,0.37223371266318,1.85653965465393,0.974370051611986,0.757301322732344,0.0920498986422993,0.161646056818812,3.19508633264953,0.201504196455281,1.18692414617341,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,2.57296375277154,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,3.36106460970222,0,0,0,0,0.771622122786426,2.83698264046557,1.8649552531127,0,2.17048642156577,0.823240336780769,0.325736184293735,0,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.315404830067869,0.35142424497814,2.10662269809403,4.5481500811197,1.03473071292505,7.97070718242524,9.03408925854345,0.0868836144680828,0.391602314925481,1.71571711905428,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.574890092096664,0,0.232420756919918,0,0,0,0.68888668898764,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.863663664408557,0,0.812839312631559,0,0,1.66215201785745,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.386682873168488,1.07834031980251,0.921022048356777,0.413509717453592,0,0.290033387828457,0.255679882248303,0.623224249527161,0,0,0,0,0.929691098594572,2.51849877464512,1.3940745403212,1.84820148105653,0,0.869932992075073,0.55597265731176,0.858749320451947,0,0,0,0.255897791311334,0,1.27281299170375,0,0.359744915166629,0,0.706874414074119,0,3.17020642346017,2.10629228119491,0.48763373908959,0.243713489631284,1.05650146756755,0,2.82810863907426,0,0.551365343546124,2.65375590096488,0.438450885253763,0.578775534266688,0.655894752046633,0,0.6196469961995,5.35221644811259,0.430234056612155,0.294747123039363,0.35667105148125,0,0.633322905892992,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0.412618309791701,0,0,0,0,0,0,1.67854682031994,1.79520572082991,0,0,0.714695326373367,0,13.221963958047,0,1.72844298240254,0.326587360109409,0,0,1.19271615249795,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,4.23478475456709,0,0,1.64180283175561,0.467426619694449,0,2.84104507912634,0.754703705257725,0.889811221596536,0.228840068396924,0.302461847526478,1.24349760466224,0.73927574994817,0.955780602982214,0,1.39736661188633,0,3.98762571836992,0,2.40412174395549,0,0.406870733204662,1.45478927362048,1.8259794697223,0.464033759878494,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.506827321959218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,2.40513409419076,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0,1.0195626881269,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,1.85997509083376,0.924351257262837,0.865253124247578,0.126166424835079,0,0,0.407955318967927,0.26721740526556,0,0,0,0,0,0,0,0.476128862927481,0,0,2.4669009767735,0,0.202117188958219,0,0,0.0673520530145875,0,0.665320713092027,0,0,3.8614456457388,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p5@APCDD1L | |short_description=p5@APCDD1L | ||
}} | }} |
Latest revision as of 05:26, 17 September 2015
Short description: | p5@APCDD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APCDD1L_5end |
Coexpression cluster: | C4054_Osteoblast_Fibroblast_leiomyoblastoma_meningioma_Smooth_salivary_Chondrocyte |
Association with transcript: | 19bp_to_NM_153360, uc002xze.1, uc010zzp.1_5end |
EntrezGene: | APCDD1L |
HGNC: | 26892 |
UniProt: | Q8NCL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.88e-08 | 6 |
chondrocyte | 2.88e-08 | 6 |
osteoblast | 7.33e-07 | 11 |
osteoprogenitor cell | 7.33e-07 | 11 |
mesenchyme condensation cell | 7.33e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
somite | 1.07e-07 | 71 |
presomitic mesoderm | 1.07e-07 | 71 |
presumptive segmental plate | 1.07e-07 | 71 |
dermomyotome | 1.07e-07 | 71 |
trunk paraxial mesoderm | 1.07e-07 | 71 |
paraxial mesoderm | 1.54e-07 | 72 |
presumptive paraxial mesoderm | 1.54e-07 | 72 |
dense mesenchyme tissue | 2.21e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.35e-07 | 2 |