FFCP PHASE1:Hg19::chr12:105478259..105478266,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=160428 | |EntrezGene=160428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26777 | |HGNC=26777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000552270_5end | |association_with_transcript=-23bp_to_ENST00000552270_5end | ||
|cluster_id=chr12:105478259..105478266,- | |||
|coexpression_cluster_id=C2179 | |coexpression_cluster_id=C2179 | ||
|description=CAGE_peak_4_at_ALDH1L2_5end | |description=CAGE_peak_4_at_ALDH1L2_5end | ||
|id=chr12:105478259..105478266,- | |id=chr12:105478259..105478266,- | ||
|ontology_enrichment_celltype=CL:0002620;7.02e-15;23!CL:0000057;6.00e-11;73!CL:0000197;1.06e-07;6!CL:0000098;1.06e-07;6!CL:0002167;1.06e-07;6!CL:0000188;2.03e-07;9!CL:0002556;3.81e-07;6 | |ontology_enrichment_celltype=CL:0000055!4.23e-24!180;CL:0000057!6.81e-21!75;CL:0002620!2.48e-10!23;CL:0000680!8.87e-08!57;CL:0000056!8.87e-08!57;CL:0000355!8.87e-08!57;CL:0000187!3.56e-07!54 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;7.02e-15;23!CL:0000057;6.00e-11;73!CL:0000197;1.06e-07;6!CL:0000098;1.06e-07;6!CL:0002167;1.06e-07;6!CL:0000188;2.03e-07;9!CL:0002556;3.81e-07;6 | ||
|ontology_enrichment_disease=DOID:17;1.97e-07;5!DOID:450;1.97e-07;5!DOID:66;1.97e-07;5!DOID:423;1.97e-07;5!DOID:0080000;1.97e-07;5!DOID:11722;1.97e-07;5 | |ontology_enrichment_celltype_v019_2=CL:0000057,4.32e-26,76;CL:0002620,2.55e-15,23;CL:0000048,4.49e-12,427;CL:0000723,6.94e-12,433;CL:0000034,4.28e-11,441;CL:0000680,3.05e-08,58;CL:0000056,3.05e-08,58;CL:0000355,3.05e-08,58;CL:0000197,4.26e-08,6;CL:0000098,4.26e-08,6;CL:0002167,4.26e-08,6;CL:0000187,1.02e-07,55;CL:0000188,1.55e-07,9;CL:0002556,1.91e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0002097;5.78e-08;41!UBERON:0001758;3.81e-07;6!UBERON:0003672;3.81e-07;6 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.97e-07;5!DOID:450;1.97e-07;5!DOID:66;1.97e-07;5!DOID:423;1.97e-07;5!DOID:0080000;1.97e-07;5!DOID:11722;1.97e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.78e-07,5;DOID:450,1.78e-07,5;DOID:66,1.78e-07,5;DOID:423,1.78e-07,5;DOID:0080000,1.78e-07,5;DOID:11722,1.78e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.03e-13!95;UBERON:0000914!6.57e-12!83;UBERON:0002329!6.57e-12!83;UBERON:0003077!6.57e-12!83;UBERON:0003059!6.57e-12!83;UBERON:0007282!6.57e-12!83;UBERON:0009618!6.57e-12!83;UBERON:0007285!6.57e-12!83;UBERON:0000475!5.57e-10!365;UBERON:0002100!2.75e-09!216;UBERON:0002199!2.34e-08!45;UBERON:0002416!2.34e-08!45;UBERON:0000486!3.84e-08!82;UBERON:0004290!4.58e-08!70;UBERON:0002097!5.22e-08!40;UBERON:0000165!5.69e-07!28;UBERON:0000930!5.69e-07!28;UBERON:0001134!7.30e-07!61;UBERON:0002036!7.30e-07!61;UBERON:0003082!7.30e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.78e-08;41!UBERON:0001758;3.81e-07;6!UBERON:0003672;3.81e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.05e-13,99;UBERON:0002097,5.86e-11,41;UBERON:0007524,3.19e-09,73;UBERON:0002199,5.21e-09,46;UBERON:0002416,5.21e-09,46;UBERON:0002329,7.84e-09,71;UBERON:0003059,7.84e-09,71;UBERON:0007282,7.84e-09,71;UBERON:0004290,7.84e-09,71;UBERON:0009618,7.84e-09,71;UBERON:0003077,1.37e-08,72;UBERON:0007285,1.37e-08,72;UBERON:0000486,3.74e-08,83;UBERON:0001758,1.91e-07,6;UBERON:0003672,1.91e-07,6;UBERON:0007503,2.80e-07,78;UBERON:0001134,3.04e-07,62;UBERON:0002036,3.04e-07,62;UBERON:0003082,3.04e-07,62;UBERON:0002384,4.17e-07,371;UBERON:0002385,8.47e-07,64;UBERON:0001015,8.47e-07,64;UBERON:0000383,8.47e-07,64 | |||
|phase1_expression=4.90531624030503,1.2846031433459,3.80576891059122,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0.218441372130172,0.527533956456907,0.866364470720326,1.65698687863958,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,2.89151321907653,3.50936537445123,1.01392563272577,3.1811437882044,0.973269740605272,0,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,1.39293562831038,1.72131935057184,4.58938593198102,0.709336764396714,0,2.1349799145941,1.72667283892012,1.24484414159907,2.02066008104532,0.817309515567294,0.908144565869588,1.15235184896,0.70296429550139,0.312160076830321,0.570471821544449,1.04614076386261,2.3486899728753,1.94247533241758,1.96631129383148,2.85815839756851,1.96534907698829,2.9964476540972,0,3.70900393917835,0,1.43723628363248,1.34668891163253,1.50142223846357,1.93944880838928,3.07284334616587,2.45190236639216,2.55404700141215,0.680593098960126,3.58779271377724,3.84403299873421,2.54318281391474,2.10063767259082,2.57631323096097,5.15281080091258,2.41951913231067,4.72573730275545,1.85130309806277,4.79624171063818,3.86609574297657,2.10139873864455,5.32514388774922,1.71278566986988,0.508681776931463,0.193260853163297,0.545492241181669,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0,0,1.92972281457866,0,2.78620756819187,1.44375896333917,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.343135620597051,1.09750285408626,0,0.502644862058154,0.555530670951178,0,0,0,0,1.05667824812239,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,0.16798212819886,0.567100388969546,2.4180801129769,2.03443756959773,0,0,0,0,0,0.12624243342638,1.0159663086747,0.381988425558278,0,0,0,0.901029173531752,0.571652865261156,1.45770409648969,1.30788020649984,0.95339771567235,2.19761916788222,0,0.845302752556,1.32969058292435,0,0.257207374262142,0,0.532844358032199,2.43062589218851,0.542621605391443,0,1.62868092146868,1.06617584622764,0,0,0,0,0,0,0,2.63587341040741,2.29723871668228,0,1.01346914667305,0.410952645100767,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0.500170521059677,1.89885516589815,2.70362119990049,3.39015078714607,3.46945313074656,2.45996971484698,1.20378439891088,0,0,1.99267679560631,0.368738337083406,1.39013783148933,0,0,0,0,0,0,1.66435439510497,0.30239029332968,2.23297027036899,5.06424511850606,4.77122160536225,3.07533958213682,1.02341449813341,2.41280881715411,1.48418066444991,0.771048469013278,0.887808626565635,1.72467027628999,0,0.697262270759755,0.120859449591622,0,1.47329582297434,2.87036120411517,2.1850940160806,0.786746489756545,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0.650756789328606,0,0.732555718546747,0.577566499444116,0.574265537996172,0.650060246036521,3.21367859688319,2.22342652071881,1.07834031980251,1.38153307253517,1.92971201478343,3.22260734604821,2.61030049045611,1.70453254832202,1.33548053470106,1.4875642382488,0.960950336825531,0.382838137483752,1.11273558941105,0,2.83331112147576,1.3940745403212,0.616067160352178,0,0,1.29726953372744,2.86249773483982,0.744316738719335,0.949138274156178,1.14378116354295,0.255897791311334,3.42351190427136,1.27281299170375,1.56989728039846,1.2591072030832,1.09814811894422,1.06031162111118,0.808729926293264,0,1.26377536871694,0,0.731140468893853,1.05650146756755,2.45699840534374,2.54529777516683,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.563391205064483,1.14729081763241,2.55447506634115,0.35667105148125,0.709522128141196,1.05553817648832,3.29294892959902,0,1.04980416073495,1.05844323998063,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0.735120647943095,0,0,0,0,0,0,1.05836791361941,0.324621940274555,0,0.456469358066384,0,0,0,0,0.403599414382095,0.425846237690326,0,1.84344458585075,0.671028323677248,1.16794399198336,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0.556543525114529,0,0,0.398495976502139,0,0,0,0,1.86623752597084,0.718946809178615,0,2.55786185113436,0.295930216910801,0,1.11136990144637,0,0.185536196323703,0,1.30213880542617,0,0.724999575434793,0,0,0,0.344743373241465,0,1.04174996959975,0,0.120596438625408,0,0.1105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|phase1_expression=4.90531624030503,1.2846031433459,3.80576891059122,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0.218441372130172,0.527533956456907,0.866364470720326,1.65698687863958,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,2.89151321907653,3.50936537445123,1.01392563272577,3.1811437882044,0.973269740605272,0,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,1.39293562831038,1.72131935057184,4.58938593198102,0.709336764396714,0,2.1349799145941,1.72667283892012,1.24484414159907,2.02066008104532,0.817309515567294,0.908144565869588,1.15235184896,0.70296429550139,0.312160076830321,0.570471821544449,1.04614076386261,2.3486899728753,1.94247533241758,1.96631129383148,2.85815839756851,1.96534907698829,2.9964476540972,0,3.70900393917835,0,1.43723628363248,1.34668891163253,1.50142223846357,1.93944880838928,3.07284334616587,2.45190236639216,2.55404700141215,0.680593098960126,3.58779271377724,3.84403299873421,2.54318281391474,2.10063767259082,2.57631323096097,5.15281080091258,2.41951913231067,4.72573730275545,1.85130309806277,4.79624171063818,3.86609574297657,2.10139873864455,5.32514388774922,1.71278566986988,0.508681776931463,0.193260853163297,0.545492241181669,0.286804595389004,0.121973706129595,0,0.232387885739037,0,0,0,0,1.92972281457866,0,2.78620756819187,1.44375896333917,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.343135620597051,1.09750285408626,0,0.502644862058154,0.555530670951178,0,0,0,0,1.05667824812239,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,0.16798212819886,0.567100388969546,2.4180801129769,2.03443756959773,0,0,0,0,0,0.12624243342638,1.0159663086747,0.381988425558278,0,0,0,0.901029173531752,0.571652865261156,1.45770409648969,1.30788020649984,0.95339771567235,2.19761916788222,0,0.845302752556,1.32969058292435,0,0.257207374262142,0,0.532844358032199,2.43062589218851,0.542621605391443,0,1.62868092146868,1.06617584622764,0,0,0,0,0,0,0,2.63587341040741,2.29723871668228,0,1.01346914667305,0.410952645100767,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0.500170521059677,1.89885516589815,2.70362119990049,3.39015078714607,3.46945313074656,2.45996971484698,1.20378439891088,0,0,1.99267679560631,0.368738337083406,1.39013783148933,0,0,0,0,0,0,1.66435439510497,0.30239029332968,2.23297027036899,5.06424511850606,4.77122160536225,3.07533958213682,1.02341449813341,2.41280881715411,1.48418066444991,0.771048469013278,0.887808626565635,1.72467027628999,0,0.697262270759755,0.120859449591622,0,1.47329582297434,2.87036120411517,2.1850940160806,0.786746489756545,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0.650756789328606,0,0.732555718546747,0.577566499444116,0.574265537996172,0.650060246036521,3.21367859688319,2.22342652071881,1.07834031980251,1.38153307253517,1.92971201478343,3.22260734604821,2.61030049045611,1.70453254832202,1.33548053470106,1.4875642382488,0.960950336825531,0.382838137483752,1.11273558941105,0,2.83331112147576,1.3940745403212,0.616067160352178,0,0,1.29726953372744,2.86249773483982,0.744316738719335,0.949138274156178,1.14378116354295,0.255897791311334,3.42351190427136,1.27281299170375,1.56989728039846,1.2591072030832,1.09814811894422,1.06031162111118,0.808729926293264,0,1.26377536871694,0,0.731140468893853,1.05650146756755,2.45699840534374,2.54529777516683,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.563391205064483,1.14729081763241,2.55447506634115,0.35667105148125,0.709522128141196,1.05553817648832,3.29294892959902,0,1.04980416073495,1.05844323998063,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0.735120647943095,0,0,0,0,0,0,1.05836791361941,0.324621940274555,0,0.456469358066384,0,0,0,0,0.403599414382095,0.425846237690326,0,1.84344458585075,0.671028323677248,1.16794399198336,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0.556543525114529,0,0,0.398495976502139,0,0,0,0,1.86623752597084,0.718946809178615,0,2.55786185113436,0.295930216910801,0,1.11136990144637,0,0.185536196323703,0,1.30213880542617,0,0.724999575434793,0,0,0,0.344743373241465,0,1.04174996959975,0,0.120596438625408,0,0.1105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| ||
|short_description=p4@ALDH1L2 | |short_description=p4@ALDH1L2 | ||
}} | }} |
Latest revision as of 01:10, 16 September 2015
Short description: | p4@ALDH1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALDH1L2_5end |
Coexpression cluster: | C2179_Preadipocyte_myeloma_Fibroblast_Adipocyte_Multipotent_neurofibroma_Olfactory |
Association with transcript: | -23bp_to_ENST00000552270_5end |
EntrezGene: | ALDH1L2 |
HGNC: | 26777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.32e-26 | 76 |
skin fibroblast | 2.55e-15 | 23 |
multi fate stem cell | 4.49e-12 | 427 |
somatic stem cell | 6.94e-12 | 433 |
stem cell | 4.28e-11 | 441 |
muscle precursor cell | 3.05e-08 | 58 |
myoblast | 3.05e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-08 | 58 |
receptor cell | 4.26e-08 | 6 |
sensory epithelial cell | 4.26e-08 | 6 |
olfactory epithelial cell | 4.26e-08 | 6 |
muscle cell | 1.02e-07 | 55 |
cell of skeletal muscle | 1.55e-07 | 9 |
fibroblast of periodontium | 1.91e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.05e-13 | 99 |
skin of body | 5.86e-11 | 41 |
dense mesenchyme tissue | 3.19e-09 | 73 |
integument | 5.21e-09 | 46 |
integumental system | 5.21e-09 | 46 |
somite | 7.84e-09 | 71 |
presomitic mesoderm | 7.84e-09 | 71 |
presumptive segmental plate | 7.84e-09 | 71 |
dermomyotome | 7.84e-09 | 71 |
trunk paraxial mesoderm | 7.84e-09 | 71 |
paraxial mesoderm | 1.37e-08 | 72 |
presumptive paraxial mesoderm | 1.37e-08 | 72 |
multilaminar epithelium | 3.74e-08 | 83 |
periodontium | 1.91e-07 | 6 |
dentition | 1.91e-07 | 6 |
epithelial vesicle | 2.80e-07 | 78 |
skeletal muscle tissue | 3.04e-07 | 62 |
striated muscle tissue | 3.04e-07 | 62 |
myotome | 3.04e-07 | 62 |
connective tissue | 4.17e-07 | 371 |
muscle tissue | 8.47e-07 | 64 |
musculature | 8.47e-07 | 64 |
musculature of body | 8.47e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.78e-07 | 5 |
myotonic disease | 1.78e-07 | 5 |
muscle tissue disease | 1.78e-07 | 5 |
myopathy | 1.78e-07 | 5 |
muscular disease | 1.78e-07 | 5 |
myotonic dystrophy | 1.78e-07 | 5 |