FFCP PHASE1:Hg19::chr7:7595050..7595057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:7595050..7595057,- | |||
|coexpression_cluster_id=C1139 | |coexpression_cluster_id=C1139 | ||
|description=CAGE_peak_at_chr7:7595050..7595057,- | |description=CAGE_peak_at_chr7:7595050..7595057,- | ||
|id=chr7:7595050..7595057,- | |id=chr7:7595050..7595057,- | ||
|ontology_enrichment_celltype=CL:0000056;2.57e-195;4!CL:0000515;5.40e-147;3!CL:0000680;3.15e-112;7!CL:0002321;4.60e-53;15!CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000737;1.13e-13;4!CL:0000188;8.37e-07;9 | |ontology_enrichment_celltype=CL:0000515!1.15e-39!4;CL:0000188!5.77e-17!9;CL:0002242!3.08e-11!1;CL:0000228!3.08e-11!1;CL:0002372!3.08e-11!1;CL:0000055!5.33e-08!180;CL:0000680!1.52e-07!57;CL:0000056!1.52e-07!57;CL:0000355!1.52e-07!57;CL:0002551!2.87e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000056;2.57e-195;4!CL:0000515;5.40e-147;3!CL:0000680;3.15e-112;7!CL:0002321;4.60e-53;15!CL:0000228;3.99e-50;1!CL:0002372;3.99e-50;1!CL:0000737;1.13e-13;4!CL:0000188;8.37e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.57e-195,4;CL:0000228,3.99e-50,1;CL:0002372,3.99e-50,1;CL:0000680,1.72e-14,58;CL:0000056,1.72e-14,58;CL:0000355,1.72e-14,58;CL:0000737,1.13e-13,4;CL:0000222,2.26e-07,121;CL:0000188,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;2.57e-195;4!CL:0000355;7.17e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001134;8.00e-50;16!UBERON:0002036;8.00e-50;16!UBERON:0002385;5.84e-26;31!UBERON:0001015;5.84e-26;31!UBERON:0000383;5.84e-26;31!UBERON:0002204;3.88e-07;70 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!6.70e-15!70;UBERON:0000914!9.75e-15!83;UBERON:0002329!9.75e-15!83;UBERON:0003077!9.75e-15!83;UBERON:0003059!9.75e-15!83;UBERON:0007282!9.75e-15!83;UBERON:0009618!9.75e-15!83;UBERON:0007285!9.75e-15!83;UBERON:0000486!1.79e-12!82;UBERON:0001134!1.49e-11!61;UBERON:0002036!1.49e-11!61;UBERON:0003082!1.49e-11!61;UBERON:0005418!3.76e-11!1;UBERON:0001389!3.76e-11!1;UBERON:0000026!3.76e-11!1;UBERON:0008784!3.76e-11!1;UBERON:0006058!3.76e-11!1;UBERON:0003663!3.76e-11!1;UBERON:0001383!3.76e-11!1;UBERON:0004256!3.76e-11!1;UBERON:0002529!3.76e-11!1;UBERON:0004708!3.76e-11!1;UBERON:0002101!3.76e-11!1;UBERON:0004709!3.76e-11!1;UBERON:0003661!3.76e-11!1;UBERON:0002471!3.76e-11!1;UBERON:0004357!3.76e-11!1;UBERON:0009872!3.76e-11!1;UBERON:0004347!3.76e-11!1;UBERON:0005420!3.76e-11!1;UBERON:0005732!3.76e-11!1;UBERON:0006057!3.76e-11!1;UBERON:0000978!3.76e-11!1;UBERON:0002103!3.76e-11!1;UBERON:0001665!3.76e-11!1;UBERON:0003823!3.76e-11!1;UBERON:0000154!3.76e-11!1;UBERON:0005733!3.76e-11!1;UBERON:0005730!3.76e-11!1;UBERON:0002385!3.80e-11!63;UBERON:0001015!3.80e-11!63;UBERON:0000383!3.80e-11!63;UBERON:0005256!3.38e-09!143;UBERON:0002100!1.72e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.00e-50;16!UBERON:0002036;8.00e-50;16!UBERON:0002385;5.84e-26;31!UBERON:0001015;5.84e-26;31!UBERON:0000383;5.84e-26;31!UBERON:0002204;3.88e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.29e-13,62;UBERON:0002036,1.29e-13,62;UBERON:0003082,1.29e-13,62;UBERON:0002385,3.22e-13,64;UBERON:0001015,3.22e-13,64;UBERON:0000383,3.22e-13,64;UBERON:0002329,5.31e-12,71;UBERON:0003059,5.31e-12,71;UBERON:0007282,5.31e-12,71;UBERON:0004290,5.31e-12,71;UBERON:0009618,5.31e-12,71;UBERON:0003077,7.58e-12,72;UBERON:0007285,7.58e-12,72;UBERON:0007524,1.07e-11,73;UBERON:0007503,5.31e-11,78;UBERON:0000486,2.17e-10,83;UBERON:0005256,2.56e-07,122 | |||
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|short_description=p@chr7:7595050..7595057,- | |short_description=p@chr7:7595050..7595057,- | ||
}} | }} |
Latest revision as of 11:42, 31 July 2015
Short description: | p@chr7:7595050..7595057, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:7595050..7595057, - |
Coexpression cluster: | C1139_Myoblast_mesenchymal_tongue_Preadipocyte_Astrocyte_nasal_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.57e-195 | 4 |
multinucleate cell | 3.99e-50 | 1 |
myotube | 3.99e-50 | 1 |
muscle precursor cell | 1.72e-14 | 58 |
myoblast | 1.72e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-14 | 58 |
striated muscle cell | 1.13e-13 | 4 |
mesodermal cell | 2.26e-07 | 121 |
cell of skeletal muscle | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.29e-13 | 62 |
striated muscle tissue | 1.29e-13 | 62 |
myotome | 1.29e-13 | 62 |
muscle tissue | 3.22e-13 | 64 |
musculature | 3.22e-13 | 64 |
musculature of body | 3.22e-13 | 64 |
somite | 5.31e-12 | 71 |
presomitic mesoderm | 5.31e-12 | 71 |
presumptive segmental plate | 5.31e-12 | 71 |
dermomyotome | 5.31e-12 | 71 |
trunk paraxial mesoderm | 5.31e-12 | 71 |
paraxial mesoderm | 7.58e-12 | 72 |
presumptive paraxial mesoderm | 7.58e-12 | 72 |
dense mesenchyme tissue | 1.07e-11 | 73 |
epithelial vesicle | 5.31e-11 | 78 |
multilaminar epithelium | 2.17e-10 | 83 |
trunk mesenchyme | 2.56e-07 | 122 |