FFCP PHASE1:Hg19::chr10:18579832..18579846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:18579832..18579846,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_at_chr10:18579832..18579846,+ | |description=CAGE_peak_at_chr10:18579832..18579846,+ | ||
|id=chr10:18579832..18579846,+ | |id=chr10:18579832..18579846,+ | ||
|ontology_enrichment_celltype=CL:0000243;9.10e-07;15!CL:0000125;9.10e-07;15 | |ontology_enrichment_celltype=CL:0002535!6.15e-08!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0000243;9.10e-07;15!CL:0000125;9.10e-07;15 | ||
|ontology_enrichment_disease=DOID:2355;1.11e-25;1!DOID:74;1.46e-13;2!DOID:3093;3.27e-09;11!DOID:5409;1.59e-07;4!DOID:1287;1.98e-07;4 | |ontology_enrichment_celltype_v019_2=CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | ||
|ontology_enrichment_uberon=UBERON:0001905;4.54e-50;2!UBERON:0002757;4.54e-50;2!UBERON:0010134;4.54e-50;2!UBERON:0005408;4.54e-50;2!UBERON:0001899;4.54e-50;2!UBERON:0003296;1.19e-25;4!UBERON:0010133;1.19e-25;4!UBERON:0002784;1.19e-25;4!UBERON:0000966;8.98e-21;5!UBERON:0005388;8.98e-21;5!UBERON:0001802;8.98e-21;5!UBERON:0001894;3.93e-15;7!UBERON:0000970;6.62e-12;20!UBERON:0002104;2.26e-11;21!UBERON:0000020;1.93e-10;23!UBERON:0001032;4.92e-10;24!UBERON:0004456;4.92e-10;24 | |ontology_enrichment_development_v019=UBERON:0003056;7.70e-34;3!UBERON:0006238;5.79e-10;10!CL:0000339;9.10e-07;15 | ||
|ontology_enrichment_disease=DOID:2355!1.23e-14!1;DOID:74!5.74e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.11e-25;1!DOID:74;1.46e-13;2!DOID:3093;3.27e-09;11!DOID:5409;1.59e-07;4!DOID:1287;1.98e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.26e-25,1;DOID:74,1.55e-13,2;DOID:3093,3.27e-09,11;DOID:5409,1.59e-07,4;DOID:1287,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003296!1.28e-30!4;UBERON:0010133!1.28e-30!4;UBERON:0001905!7.10e-28!2;UBERON:0002757!7.10e-28!2;UBERON:0010134!7.10e-28!2;UBERON:0002784!7.10e-28!2;UBERON:0005408!7.10e-28!2;UBERON:0001899!7.10e-28!2;UBERON:0001894!8.30e-18!7;UBERON:0006222!8.30e-18!7;UBERON:0001874!2.75e-14!1;UBERON:0000966!9.26e-12!5;UBERON:0005388!9.26e-12!5;UBERON:0001802!9.26e-12!5;UBERON:0000970!5.48e-11!20;UBERON:0002104!1.78e-10!21;UBERON:0003056!6.02e-10!61;UBERON:0000020!1.38e-09!23;UBERON:0001032!3.39e-09!24;UBERON:0004456!3.39e-09!24;UBERON:0003075!5.57e-09!86;UBERON:0007284!5.57e-09!86;UBERON:0005743!6.42e-09!86;UBERON:0002346!1.50e-08!90;UBERON:0000073!5.13e-08!94;UBERON:0001016!5.13e-08!94;UBERON:0006955!6.15e-08!2;UBERON:0004801!6.15e-08!2;UBERON:0000007!6.58e-08!2;UBERON:0002360!7.03e-08!2;UBERON:0000094!7.03e-08!2;UBERON:0007645!7.03e-08!2;UBERON:0000033!1.27e-07!123;UBERON:0000153!3.17e-07!129;UBERON:0007811!3.17e-07!129;UBERON:0001017!3.38e-07!82;UBERON:0000019!7.19e-07!19;UBERON:0000047!7.19e-07!19;UBERON:0004088!7.19e-07!19;UBERON:0003072!7.19e-07!19;UBERON:0003071!7.19e-07!19;UBERON:0004128!7.19e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.54e-50;2!UBERON:0002757;4.54e-50;2!UBERON:0010134;4.54e-50;2!UBERON:0005408;4.54e-50;2!UBERON:0001899;4.54e-50;2!UBERON:0003296;1.19e-25;4!UBERON:0010133;1.19e-25;4!UBERON:0002784;1.19e-25;4!UBERON:0000966;8.98e-21;5!UBERON:0005388;8.98e-21;5!UBERON:0001802;8.98e-21;5!UBERON:0001894;3.93e-15;7!UBERON:0000970;6.62e-12;20!UBERON:0002104;2.26e-11;21!UBERON:0000020;1.93e-10;23!UBERON:0001032;4.92e-10;24!UBERON:0004456;4.92e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.00e-50,2;UBERON:0002757,4.00e-50,2;UBERON:0010134,4.00e-50,2;UBERON:0005408,4.00e-50,2;UBERON:0001899,4.00e-50,2;UBERON:0003296,1.11e-25,4;UBERON:0010133,1.11e-25,4;UBERON:0002784,1.11e-25,4;UBERON:0000966,1.71e-17,6;UBERON:0005388,1.71e-17,6;UBERON:0001802,1.71e-17,6;UBERON:0001894,3.79e-15,7;UBERON:0006222,3.79e-15,7;UBERON:0000970,2.26e-11,21;UBERON:0002104,2.26e-11,21;UBERON:0000020,4.92e-10,24;UBERON:0001032,4.92e-10,24;UBERON:0004456,4.92e-10,24;UBERON:0003056,8.13e-07,61 | |||
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|short_description=p@chr10:18579832..18579846,+ | |short_description=p@chr10:18579832..18579846,+ | ||
}} | }} |
Latest revision as of 12:23, 23 July 2015
Short description: | p@chr10:18579832..18579846, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18579832..18579846, + |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.00e-50 | 2 |
regional part of epithalamus | 4.00e-50 | 2 |
secretory circumventricular organ | 4.00e-50 | 2 |
circumventricular organ | 4.00e-50 | 2 |
epithalamus | 4.00e-50 | 2 |
gland of diencephalon | 1.11e-25 | 4 |
neuroendocrine gland | 1.11e-25 | 4 |
regional part of diencephalon | 1.11e-25 | 4 |
retina | 1.71e-17 | 6 |
photoreceptor array | 1.71e-17 | 6 |
posterior segment of eyeball | 1.71e-17 | 6 |
diencephalon | 3.79e-15 | 7 |
future diencephalon | 3.79e-15 | 7 |
eye | 2.26e-11 | 21 |
visual system | 2.26e-11 | 21 |
sense organ | 4.92e-10 | 24 |
sensory system | 4.92e-10 | 24 |
entire sense organ system | 4.92e-10 | 24 |
pre-chordal neural plate | 8.13e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.26e-25 | 1 |
hematopoietic system disease | 1.55e-13 | 2 |
nervous system cancer | 3.27e-09 | 11 |
lung small cell carcinoma | 1.59e-07 | 4 |
cardiovascular system disease | 2.04e-07 | 4 |