FFCP PHASE1:Hg19::chr11:116701324..116701329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345 | |EntrezGene=345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=610 | |HGNC=610 | ||
|TSSclassifier=strong | |||
|UniProt=P02656 | |UniProt=P02656 | ||
|association_with_transcript=25bp_to_X00567_5end | |association_with_transcript=25bp_to_X00567_5end | ||
|cluster_id=chr11:116701324..116701329,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_APOC3_5end | |description=CAGE_peak_8_at_APOC3_5end | ||
|id=chr11:116701324..116701329,+ | |id=chr11:116701324..116701329,+ | ||
|ontology_enrichment_celltype=CL:0000182;6.10e-22;12 | |ontology_enrichment_celltype=CL:0000181!1.06e-15!12;CL:0000417!1.06e-15!12;CL:0000668!1.06e-15!12;CL:0000414!1.06e-15!12;CL:0000412!1.06e-15!12;CL:0000182!1.06e-15!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;6.10e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.48e-11;11!UBERON:0009497;9.72e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.30e-23;31!UBERON:0002330;4.30e-23;31!UBERON:0002368;6.02e-20;33!UBERON:0000949;1.83e-14;43!UBERON:0005172;1.97e-10;52!UBERON:0005173;1.97e-10;52!UBERON:0002417;4.53e-08;58!UBERON:0000916;4.53e-08;58!UBERON:0002530;1.32e-07;57!UBERON:0001007;1.73e-07;81 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.98e-26!19;UBERON:0006925!1.98e-26!19;UBERON:0008836!1.98e-26!19;UBERON:0008835!7.29e-23!22;UBERON:0003894!7.29e-23!22;UBERON:0009854!7.01e-22!23;UBERON:0007499!3.77e-20!25;UBERON:0009497!3.77e-20!25;UBERON:0000015!3.77e-20!25;UBERON:0002423!3.77e-20!25;UBERON:0006235!3.77e-20!25;UBERON:0004161!3.77e-20!25;UBERON:0005057!2.20e-19!26;UBERON:0009856!2.20e-19!26;UBERON:0002365!2.72e-16!31;UBERON:0002330!2.72e-16!31;UBERON:0002368!1.89e-14!35;UBERON:0003929!3.12e-13!54;UBERON:0000949!2.85e-11!45;UBERON:0004921!2.03e-09!129;UBERON:0004185!2.03e-09!129;UBERON:0005172!3.07e-09!55;UBERON:0005173!3.07e-09!55;UBERON:0005911!1.11e-08!82;UBERON:0002530!1.29e-08!59;UBERON:0002417!2.45e-08!61;UBERON:0000916!2.45e-08!61;UBERON:0001007!8.98e-08!155;UBERON:0001555!8.98e-08!155;UBERON:0007026!8.98e-08!155;UBERON:0004119!4.31e-07!169;UBERON:0000925!4.31e-07!169;UBERON:0006595!4.31e-07!169;UBERON:0000160!6.45e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-37;19!UBERON:0006925;1.91e-37;19!UBERON:0002423;1.35e-28;25!UBERON:0002365;4.30e-23;31!UBERON:0002330;4.30e-23;31!UBERON:0002368;6.02e-20;33!UBERON:0000949;1.83e-14;43!UBERON:0005172;1.97e-10;52!UBERON:0005173;1.97e-10;52!UBERON:0002417;4.53e-08;58!UBERON:0000916;4.53e-08;58!UBERON:0002530;1.32e-07;57!UBERON:0001007;1.73e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.77e-37,19;UBERON:0006925,1.77e-37,19;UBERON:0008836,1.77e-37,19;UBERON:0008835,1.90e-32,22;UBERON:0003894,1.90e-32,22;UBERON:0009854,4.62e-31,23;UBERON:0007499,1.27e-28,25;UBERON:0009497,1.27e-28,25;UBERON:0000015,1.27e-28,25;UBERON:0002423,1.27e-28,25;UBERON:0006235,1.27e-28,25;UBERON:0004161,1.27e-28,25;UBERON:0009856,1.53e-27,26;UBERON:0002365,3.50e-23,31;UBERON:0002330,3.50e-23,31;UBERON:0002368,1.37e-20,35;UBERON:0000949,4.12e-16,45;UBERON:0003929,1.72e-13,54;UBERON:0005172,1.72e-13,54;UBERON:0005173,1.72e-13,54;UBERON:0002530,2.23e-12,59;UBERON:0002417,3.53e-12,60;UBERON:0000916,3.53e-12,60;UBERON:0005911,5.41e-09,82;UBERON:0001041,1.72e-08,87;UBERON:0005177,2.40e-07,101 | |||
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|short_description=p8@APOC3 | |short_description=p8@APOC3 | ||
}} | }} |
Latest revision as of 19:32, 15 September 2015
Short description: | p8@APOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_APOC3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 25bp_to_X00567_5end |
EntrezGene: | APOC3 |
HGNC: | 610 |
UniProt: | P02656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.77e-37 | 19 |
digestive gland | 1.77e-37 | 19 |
liver bud | 1.77e-37 | 19 |
hepatic diverticulum | 1.90e-32 | 22 |
liver primordium | 1.90e-32 | 22 |
digestive tract diverticulum | 4.62e-31 | 23 |
epithelial sac | 1.27e-28 | 25 |
epithelium of foregut-midgut junction | 1.27e-28 | 25 |
anatomical boundary | 1.27e-28 | 25 |
hepatobiliary system | 1.27e-28 | 25 |
foregut-midgut junction | 1.27e-28 | 25 |
septum transversum | 1.27e-28 | 25 |
sac | 1.53e-27 | 26 |
exocrine gland | 3.50e-23 | 31 |
exocrine system | 3.50e-23 | 31 |
endocrine gland | 1.37e-20 | 35 |
endocrine system | 4.12e-16 | 45 |
gut epithelium | 1.72e-13 | 54 |
abdomen element | 1.72e-13 | 54 |
abdominal segment element | 1.72e-13 | 54 |
gland | 2.23e-12 | 59 |
abdominal segment of trunk | 3.53e-12 | 60 |
abdomen | 3.53e-12 | 60 |
endo-epithelium | 5.41e-09 | 82 |
foregut | 1.72e-08 | 87 |
trunk region element | 2.40e-07 | 101 |