FFCP PHASE1:Hg19::chr1:159174575..159174586,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:159174575..159174586,+
|short_description=p4@DARC
|description=CAGE_peak_4_at_DARC_5end
|association_with_transcript=65bp_to_uc001fto.2_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2532 | |EntrezGene=2532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4035 | |HGNC=4035 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_uc001fto.2_5end | |||
|cluster_id=chr1:159174575..159174586,+ | |||
|coexpression_cluster_id=C1251 | |||
|description=CAGE_peak_4_at_DARC_5end | |||
|id=chr1:159174575..159174586,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.94e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.17e-08,2 | |||
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| ||
|short_description=p4@DARC | |||
}} | }} |
Latest revision as of 22:30, 17 September 2015
Short description: | p4@DARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DARC_5end |
Coexpression cluster: | C1251_adipose_heart_left_trachea_dura_cervix_bladder |
Association with transcript: | 65bp_to_uc001fto.2_5end |
EntrezGene: | DARC |
HGNC: | 4035 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.93e-65 | 114 |
posterior neural tube | 2.23e-15 | 15 |
chordal neural plate | 2.23e-15 | 15 |
segmental subdivision of nervous system | 1.14e-13 | 13 |
cardiac chamber | 4.15e-13 | 3 |
medulla oblongata | 3.31e-12 | 3 |
myelencephalon | 3.31e-12 | 3 |
future myelencephalon | 3.31e-12 | 3 |
segmental subdivision of hindbrain | 4.23e-11 | 12 |
hindbrain | 4.23e-11 | 12 |
presumptive hindbrain | 4.23e-11 | 12 |
brainstem | 1.12e-10 | 6 |
cardiac atrium | 8.92e-10 | 2 |
future cardiac atrium | 8.92e-10 | 2 |
open tracheal system trachea | 1.89e-09 | 2 |
neural tube | 1.12e-08 | 56 |
neural rod | 1.12e-08 | 56 |
future spinal cord | 1.12e-08 | 56 |
neural keel | 1.12e-08 | 56 |
compound organ | 3.28e-07 | 68 |
neural plate | 3.33e-07 | 82 |
presumptive neural plate | 3.33e-07 | 82 |
central nervous system | 3.41e-07 | 81 |
nervous system | 3.58e-07 | 89 |
structure with developmental contribution from neural crest | 3.99e-07 | 132 |
organ system subdivision | 4.64e-07 | 223 |
neurectoderm | 9.86e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.17e-08 | 2 |