FFCP PHASE1:Hg19::chr16:10869031..10869038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=780776 | |EntrezGene=780776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20398 | |HGNC=20398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-78bp_to_uc002dae.1_5end | |association_with_transcript=-78bp_to_uc002dae.1_5end | ||
|cluster_id=chr16:10869031..10869038,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_12_at_FAM18A_5end | |description=CAGE_peak_12_at_FAM18A_5end | ||
|id=chr16:10869031..10869038,- | |id=chr16:10869031..10869038,- | ||
|ontology_enrichment_celltype=CL:0000453!1.14e-23!5;CL:0000990!6.88e-20!8;CL:0000451!3.04e-16!10;CL:0000946!1.31e-08!1;CL:0000786!1.31e-08!1;CL:0000980!1.31e-08!1;CL:0000319!1.52e-08!1;CL:0000945!4.99e-07!24;CL:0000826!4.99e-07!24 | |ontology_enrichment_celltype=CL:0000453!1.14e-23!5;CL:0000990!6.88e-20!8;CL:0000451!3.04e-16!10;CL:0000946!1.31e-08!1;CL:0000786!1.31e-08!1;CL:0000980!1.31e-08!1;CL:0000319!1.52e-08!1;CL:0000945!4.99e-07!24;CL:0000826!4.99e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.06e-125;5!CL:0000990;2.36e-70;8!CL:0000451;9.27e-58;10!CL:0000946;2.70e-40;1!CL:0000786;2.70e-40;1!CL:0001014;6.30e-21;2!CL:0001016;6.30e-21;2!CL:0000840;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.01e-126,5;CL:0000990,2.16e-70,8;CL:0000451,8.62e-58,10;CL:0000946,3.30e-40,1;CL:0000786,3.30e-40,1;CL:0000980,3.30e-40,1;CL:0001014,5.70e-21,2;CL:0001016,5.70e-21,2;CL:0000785,6.96e-21,2;CL:0000955,6.96e-21,2;CL:0000818,6.96e-21,2;CL:0000954,6.96e-21,2;CL:0000816,6.96e-21,2;CL:0000817,2.09e-14,3;CL:0000840,6.78e-08,5;CL:0001029,6.78e-08,5;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000954;6.30e-21;2 | |||
|ontology_enrichment_disease=DOID:3030!1.52e-08!1 | |ontology_enrichment_disease=DOID:3030!1.52e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!6.27e-28!19;UBERON:0001737!2.00e-27!9;UBERON:0000072!9.99e-11!46;UBERON:0004177!2.82e-09!7;UBERON:0000065!3.98e-09!53;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0002370!8.83e-08!4;UBERON:0005058!8.83e-08!4;UBERON:0009113!8.83e-08!4;UBERON:0003295!8.83e-08!4;UBERON:0005562!8.83e-08!4 | |ontology_enrichment_uberon=UBERON:0001557!6.27e-28!19;UBERON:0001737!2.00e-27!9;UBERON:0000072!9.99e-11!46;UBERON:0004177!2.82e-09!7;UBERON:0000065!3.98e-09!53;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0002370!8.83e-08!4;UBERON:0005058!8.83e-08!4;UBERON:0009113!8.83e-08!4;UBERON:0003295!8.83e-08!4;UBERON:0005562!8.83e-08!4 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,4.11881004971426,6.21548498172208,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,4.11881004971426,6.21548498172208,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p12@FAM18A | |short_description=p12@FAM18A | ||
}} | }} |
Latest revision as of 04:43, 20 September 2015
Short description: | p12@FAM18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FAM18A_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -78bp_to_uc002dae.1_5end |
EntrezGene: | FAM18A |
HGNC: | 20398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 9.01e-126 | 5 |
conventional dendritic cell | 2.16e-70 | 8 |
dendritic cell | 8.62e-58 | 10 |
antibody secreting cell | 3.30e-40 | 1 |
plasma cell | 3.30e-40 | 1 |
plasmablast | 3.30e-40 | 1 |
CD1a-positive Langerhans cell | 5.70e-21 | 2 |
immature CD1a-positive Langerhans cell | 5.70e-21 | 2 |
mature B cell | 6.96e-21 | 2 |
pre-B-II cell | 6.96e-21 | 2 |
transitional stage B cell | 6.96e-21 | 2 |
small pre-B-II cell | 6.96e-21 | 2 |
immature B cell | 6.96e-21 | 2 |
precursor B cell | 2.09e-14 | 3 |
immature conventional dendritic cell | 6.78e-08 | 5 |
common dendritic progenitor | 6.78e-08 | 5 |
leukocyte | 7.64e-08 | 136 |