FFCP PHASE1:Hg19::chr1:165864783..165864796,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:165864783..165864796,+
|short_description=p8@UCK2
|description=CAGE_peak_8_at_UCK2_5end
|association_with_transcript=-16bp_to_ENST00000469256_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7371 | |EntrezGene=7371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12562 | |HGNC=12562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000469256_5end | |||
|cluster_id=chr1:165864783..165864796,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_8_at_UCK2_5end | |||
|id=chr1:165864783..165864796,+ | |||
|ontology_enrichment_celltype=CL:0000359!9.74e-10!32;CL:0000220!1.01e-09!246;CL:0000144!1.33e-09!625;CL:0002321!1.67e-09!248;CL:0000192!8.13e-09!42;CL:0000514!8.13e-09!42;CL:0000548!1.17e-08!679;CL:0000004!1.17e-08!679;CL:0000255!1.17e-08!679;CL:0000680!1.56e-08!57;CL:0000056!1.56e-08!57;CL:0000355!1.56e-08!57;CL:0000012!1.87e-08!682;CL:0000183!3.68e-08!59;CL:0000187!8.58e-08!54;CL:0000244!2.61e-07!4;CL:0000731!2.61e-07!4;CL:0000055!3.49e-07!180;CL:0002371!7.73e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.87e-19;3!CL:0000349;1.49e-14;19!CL:0000244;3.17e-14;4!CL:0000731;3.17e-14;4!CL:0002621;4.60e-09;3!CL:0000134;5.87e-08;55!CL:0002568;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.88e-19,3;CL:0000349,1.73e-14,19;CL:0000244,2.72e-14,4;CL:0000731,2.72e-14,4;CL:0002621,4.25e-09,3;CL:0002568,4.34e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.90e-08;1 | |||
|ontology_enrichment_disease=DOID:2394!5.96e-11!14;DOID:193!1.44e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2513;2.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000486!8.86e-11!82;UBERON:0000914!1.77e-08!83;UBERON:0002329!1.77e-08!83;UBERON:0003077!1.77e-08!83;UBERON:0003059!1.77e-08!83;UBERON:0007282!1.77e-08!83;UBERON:0009618!1.77e-08!83;UBERON:0007285!1.77e-08!83;UBERON:0001134!1.53e-07!61;UBERON:0002036!1.53e-07!61;UBERON:0003082!1.53e-07!61;UBERON:0004290!3.25e-07!70;UBERON:0002385!4.23e-07!63;UBERON:0001015!4.23e-07!63;UBERON:0000383!4.23e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.92e-21;10!UBERON:0000158;3.92e-21;10!UBERON:0003124;1.87e-19;3!UBERON:0000920;1.87e-19;3!UBERON:0000478;7.21e-15;24!UBERON:0000486;1.83e-12;12!UBERON:0000365;1.75e-11;5!UBERON:0005910;1.20e-09;6!UBERON:0001949;4.60e-09;3!UBERON:0003929;3.14e-08;7!UBERON:0000305;5.81e-08;7!UBERON:0003350;2.97e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.88e-20,14;UBERON:0000158,2.88e-20,14;UBERON:0000920,1.88e-19,3;UBERON:0000478,8.25e-15,24;UBERON:0003124,1.30e-14,7;UBERON:0000365,1.55e-11,5;UBERON:0005910,1.08e-09,6;UBERON:0001949,4.25e-09,3;UBERON:0000305,6.89e-08,7;UBERON:0004923,2.55e-07,66;UBERON:0003350,2.97e-07,8;UBERON:0004871,5.87e-07,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.491467873003018,0,1.09220686065086,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0.560677600142307,2.1349799145941,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0,0.0974370051611986,0.757301322732344,0.368199594569197,0.323292113637624,0,0,0,2.51239109112286,2.45471508531751,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,2.01578553838631,0.567100388969546,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.600686115687835,0.285826432630578,0.897048674762886,0,0.1466765716419,1.29271715757778,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,1.74306691720059,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,1.96271887676878,0.473107245101804,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,1.60405176242628,0,0.114814448164607,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,50.3870546957362,0,0,1.14853107599234,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0.267096106940212,1.81813406897076,0.576570202095319,1.78657797492418,0,0.464845549297286,0,0.6970372701606,0,0,0,0.18532421910392,0,0.372158369359667,0.632758849437452,0.762520775695299,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,1.21746226177622,0,0.281695602532241,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0,0,1.08890984861323,49.896214411693,4.73555909938353,1.68471475667626,0.886860307073351,3.21612760289743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0,0,0,0,0,0,0,0,0.251932747854276,0.20453736500431,0,2.17727711363265,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29403015302991,23.8153742844842,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0.453692771289717,0,0.295710299979268,0.318593534327405,0.899606224327209,0.776314784381297,0,0.53168342911599,1.5652351854352,0.450772826991655,1.52322084867518,0.813741466409323,0.363697318405119,0.322231671127465,0,3.58286299828754,1.20008329398946,0,0,0,0,0,0,0,0,0.244736704506468,0.358177682162975,0,0,0,0.578742114812744,0,0,0,2.73473960559644,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.8237398036937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p8@UCK2 | |||
}} | }} |
Latest revision as of 10:18, 18 September 2015
Short description: | p8@UCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_UCK2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -16bp_to_ENST00000469256_5end |
EntrezGene: | UCK2 |
HGNC: | 12562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.88e-19 | 3 |
extraembryonic cell | 1.73e-14 | 19 |
transitional epithelial cell | 2.72e-14 | 4 |
urothelial cell | 2.72e-14 | 4 |
gingival epithelial cell | 4.25e-09 | 3 |
mesenchymal stem cell of Wharton's jelly | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.88e-20 | 14 |
membranous layer | 2.88e-20 | 14 |
egg chorion | 1.88e-19 | 3 |
extraembryonic structure | 8.25e-15 | 24 |
chorion | 1.30e-14 | 7 |
urothelium | 1.55e-11 | 5 |
transitional epithelium | 1.08e-09 | 6 |
gingival epithelium | 4.25e-09 | 3 |
amnion | 6.89e-08 | 7 |
organ component layer | 2.55e-07 | 66 |
epithelium of mucosa | 2.97e-07 | 8 |
somatic layer of lateral plate mesoderm | 5.87e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.09e-07 | 1 |