FFCP PHASE1:Hg19::chr1:174933865..174933876,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:174933865..174933876,+
|short_description=p17@RABGAP1L
|description=CAGE_peak_17_at_RABGAP1L_5end
|association_with_transcript=-28bp_to_ENST00000367688,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZAP0 | |UniProt=B7ZAP0 | ||
|association_with_transcript=-28bp_to_ENST00000367688,NM_001243764,uc010pmv.1_5end | |||
|cluster_id=chr1:174933865..174933876,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_17_at_RABGAP1L_5end | |||
|id=chr1:174933865..174933876,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.46e-38!140;CL:0000037!4.52e-31!172;CL:0000566!4.52e-31!172;CL:0002032!2.28e-30!165;CL:0000837!2.28e-30!165;CL:0002087!6.36e-30!119;CL:0002031!3.79e-29!124;CL:0000988!7.11e-28!182;CL:0000766!3.07e-27!76;CL:0002057!4.86e-25!42;CL:0002009!3.65e-24!65;CL:0000763!3.35e-23!112;CL:0000049!3.35e-23!112;CL:0000839!9.08e-23!70;CL:0002194!1.27e-22!63;CL:0000576!1.27e-22!63;CL:0000040!1.27e-22!63;CL:0000559!1.27e-22!63;CL:0000860!1.35e-22!45;CL:0000557!5.65e-22!71;CL:0000791!3.12e-10!18;CL:0000789!3.12e-10!18;CL:0002420!3.12e-10!18;CL:0002419!3.12e-10!18;CL:0000790!3.12e-10!18;CL:0002393!3.25e-09!9;CL:0002397!3.25e-09!9;CL:0000094!1.30e-08!8;CL:0000084!2.76e-07!25;CL:0000827!2.76e-07!25;CL:0000453!3.82e-07!5;CL:0000542!5.06e-07!53;CL:0000051!5.06e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.64e-14;48!CL:0000775;5.75e-13;3!CL:0000875;2.04e-12;3!CL:0002396;2.04e-12;3!CL:0000094;2.70e-12;8!CL:0000766;6.59e-12;69!CL:0000473;6.77e-09;39!CL:0000234;6.77e-09;39!CL:0000081;7.63e-09;11!CL:0000453;9.30e-08;5!CL:0000860;6.11e-07;33!CL:0002057;6.11e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.38e-26,72;CL:0000738,1.87e-23,136;CL:0000763,5.40e-22,108;CL:0000049,5.40e-22,108;CL:0000473,1.10e-20,48;CL:0000234,1.10e-20,48;CL:0002194,7.61e-20,59;CL:0000576,7.61e-20,59;CL:0000040,7.61e-20,59;CL:0000559,7.61e-20,59;CL:0000839,3.25e-19,66;CL:0002009,4.79e-19,61;CL:0000037,8.82e-19,168;CL:0002032,1.33e-18,161;CL:0000837,1.33e-18,161;CL:0000988,2.07e-17,177;CL:0000557,6.19e-17,67;CL:0000860,1.42e-16,42;CL:0002057,1.42e-16,42;CL:0002393,4.10e-15,9;CL:0002397,4.10e-15,9;CL:0002087,5.11e-15,115;CL:0002031,3.61e-14,120;CL:0000775,5.66e-13,3;CL:0000875,1.76e-12,3;CL:0002396,1.76e-12,3;CL:0000094,2.77e-12,8;CL:0000081,7.77e-09,11;CL:0000453,9.53e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-11;42!CL:0000049;9.66e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.33e-29!102;UBERON:0003061!4.33e-29!102;UBERON:0002193!5.85e-27!112;UBERON:0002371!6.31e-18!80;UBERON:0001474!9.95e-16!86;UBERON:0002405!9.76e-14!115;UBERON:0004765!1.78e-11!101;UBERON:0001434!1.78e-11!101;UBERON:0000178!5.77e-10!15;UBERON:0000179!5.77e-10!15;UBERON:0000463!5.77e-10!15;UBERON:0003081!2.59e-08!216;UBERON:0007023!1.10e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.59e-20;15!UBERON:0000179;1.59e-20;15!UBERON:0000463;1.59e-20;15!UBERON:0002390;2.23e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.69e-25,98;UBERON:0003061,2.69e-25,98;UBERON:0002193,2.61e-22,108;UBERON:0000178,1.92e-20,15;UBERON:0000179,1.92e-20,15;UBERON:0000463,1.92e-20,15;UBERON:0002371,2.16e-14,76;UBERON:0001474,5.23e-13,82;UBERON:0004765,1.88e-11,90;UBERON:0002405,6.14e-11,93;UBERON:0003081,1.80e-10,203;UBERON:0001434,7.31e-10,100 | |||
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| ||
|short_description=p17@RABGAP1L | |||
}} | }} |
Latest revision as of 19:23, 18 September 2015
Short description: | p17@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RABGAP1L_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -28bp_to_ENST00000367688, NM_001243764, uc010pmv.1_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | B7ZAP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.38e-26 | 72 |
leukocyte | 1.87e-23 | 136 |
myeloid cell | 5.40e-22 | 108 |
common myeloid progenitor | 5.40e-22 | 108 |
defensive cell | 1.10e-20 | 48 |
phagocyte | 1.10e-20 | 48 |
monopoietic cell | 7.61e-20 | 59 |
monocyte | 7.61e-20 | 59 |
monoblast | 7.61e-20 | 59 |
promonocyte | 7.61e-20 | 59 |
myeloid lineage restricted progenitor cell | 3.25e-19 | 66 |
macrophage dendritic cell progenitor | 4.79e-19 | 61 |
hematopoietic stem cell | 8.82e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.33e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-18 | 161 |
hematopoietic cell | 2.07e-17 | 177 |
granulocyte monocyte progenitor cell | 6.19e-17 | 67 |
classical monocyte | 1.42e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-16 | 42 |
intermediate monocyte | 4.10e-15 | 9 |
CD14-positive, CD16-positive monocyte | 4.10e-15 | 9 |
nongranular leukocyte | 5.11e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 3.61e-14 | 120 |
neutrophil | 5.66e-13 | 3 |
non-classical monocyte | 1.76e-12 | 3 |
CD14-low, CD16-positive monocyte | 1.76e-12 | 3 |
granulocyte | 2.77e-12 | 8 |
blood cell | 7.77e-09 | 11 |
Langerhans cell | 9.53e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.69e-25 | 98 |
blood island | 2.69e-25 | 98 |
hemolymphoid system | 2.61e-22 | 108 |
blood | 1.92e-20 | 15 |
haemolymphatic fluid | 1.92e-20 | 15 |
organism substance | 1.92e-20 | 15 |
bone marrow | 2.16e-14 | 76 |
bone element | 5.23e-13 | 82 |
skeletal element | 1.88e-11 | 90 |
immune system | 6.14e-11 | 93 |
lateral plate mesoderm | 1.80e-10 | 203 |
skeletal system | 7.31e-10 | 100 |