FFCP PHASE1:Hg19::chr1:180199500..180199510,+: Difference between revisions
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|id=chr1:180199500..180199510,+
|short_description=p2@LHX4
|description=CAGE_peak_2_at_LHX4_5end
|association_with_transcript=58bp_to_uc001goe.1_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89884 | |EntrezGene=89884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21734 | |HGNC=21734 | ||
|TSSclassifier=strong | |||
|UniProt=Q969G2 | |UniProt=Q969G2 | ||
|association_with_transcript=58bp_to_uc001goe.1_5end | |||
|cluster_id=chr1:180199500..180199510,+ | |||
|description=CAGE_peak_2_at_LHX4_5end | |||
|id=chr1:180199500..180199510,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.35e-07!7;CL:0000586!1.35e-07!7;CL:0000082!2.83e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.27e-23;3!CL:0000335;2.47e-07;11!UBERON:0006238;2.47e-07;10 | |||
|ontology_enrichment_disease=DOID:5409!2.38e-13!4;DOID:1325!2.69e-13!7;DOID:3904!2.69e-13!7;DOID:3905!2.28e-10!9;DOID:305!5.12e-10!106;DOID:0050687!5.45e-10!143;DOID:162!1.56e-09!235;DOID:1324!2.76e-09!15;DOID:14566!3.16e-09!239;DOID:0050615!1.09e-08!16 | |||
|ontology_enrichment_disease_v019=DOID:3093;7.92e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.25e-12!2;UBERON:0002757!1.25e-12!2;UBERON:0010134!1.25e-12!2;UBERON:0002784!1.25e-12!2;UBERON:0005408!1.25e-12!2;UBERON:0001899!1.25e-12!2;UBERON:0008947!1.57e-10!38;UBERON:0003258!1.57e-10!38;UBERON:0001737!3.37e-10!9;UBERON:0000072!1.94e-08!46;UBERON:0004802!2.83e-07!19;UBERON:0000115!2.83e-07!19;UBERON:0000065!3.93e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.60e-14;5!UBERON:0005388;1.60e-14;5!UBERON:0001802;1.60e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6 | |||
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|short_description=p2@LHX4 | |||
}} | }} |
Latest revision as of 23:30, 18 September 2015
Short description: | p2@LHX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LHX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_uc001goe.1_5end |
EntrezGene: | LHX4 |
HGNC: | 21734 |
UniProt: | Q969G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.63e-07 | 11 |
osteoprogenitor cell | 2.63e-07 | 11 |
mesenchyme condensation cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |