FFCP PHASE1:Hg19::chr1:153520959..153520976,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6274 | |EntrezGene=6274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10493 | |HGNC=10493 | ||
|TSSclassifier=strong | |||
|UniProt=P33764 | |UniProt=P33764 | ||
|association_with_transcript=0bp_to_BT006955,CR542163,CR542185,DQ891433,DQ894608_5end | |association_with_transcript=0bp_to_BT006955,CR542163,CR542185,DQ891433,DQ894608_5end | ||
|cluster_id=chr1:153520959..153520976,- | |||
|coexpression_cluster_id=C393 | |coexpression_cluster_id=C393 | ||
|description=CAGE_peak_6_at_S100A3_5end | |description=CAGE_peak_6_at_S100A3_5end | ||
|id=chr1:153520959..153520976,- | |id=chr1:153520959..153520976,- | ||
|ontology_enrichment_celltype=CL:0002620!6.44e-15!23;CL:0002570!1.68e-09!8;CL:0000057!2.38e-09!75 | |ontology_enrichment_celltype=CL:0002620!6.44e-15!23;CL:0002570!1.68e-09!8;CL:0000057!2.38e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.40e-50;19!CL:0002577;3.02e-25;3!CL:0002570;1.12e-24;8!CL:0002536;1.83e-17;2!CL:0002537;2.31e-15;5!CL:0002541;1.15e-11;3!CL:0000134;1.71e-10;55!CL:0000723;2.18e-10;61!CL:0000048;4.09e-09;58!CL:0000034;8.08e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.20e-49,19;CL:0002577,2.37e-25,3;CL:0002570,8.51e-25,8;CL:0002536,1.91e-17,2;CL:0002537,2.25e-15,5;CL:0002541,1.29e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.56e-07!5;DOID:450!6.56e-07!5;DOID:66!6.56e-07!5;DOID:423!6.56e-07!5;DOID:0080000!6.56e-07!5;DOID:11722!6.56e-07!5 | |ontology_enrichment_disease=DOID:17!6.56e-07!5;DOID:450!6.56e-07!5;DOID:66!6.56e-07!5;DOID:423!6.56e-07!5;DOID:0080000!6.56e-07!5;DOID:11722!6.56e-07!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.56e-15!14;UBERON:0000158!1.56e-15!14;UBERON:0003124!1.75e-11!7;UBERON:0002199!5.02e-09!45;UBERON:0002416!5.02e-09!45;UBERON:0000478!5.91e-09!24;UBERON:0001013!8.50e-08!14;UBERON:0002097!1.73e-07!40;UBERON:0001987!2.05e-07!4;UBERON:0004340!2.05e-07!4;UBERON:0001737!3.60e-07!9 | |ontology_enrichment_uberon=UBERON:0005631!1.56e-15!14;UBERON:0000158!1.56e-15!14;UBERON:0003124!1.75e-11!7;UBERON:0002199!5.02e-09!45;UBERON:0002416!5.02e-09!45;UBERON:0000478!5.91e-09!24;UBERON:0001013!8.50e-08!14;UBERON:0002097!1.73e-07!40;UBERON:0001987!2.05e-07!4;UBERON:0004340!2.05e-07!4;UBERON:0001737!3.60e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.58e-39;10!UBERON:0000158;4.58e-39;10!UBERON:0000478;4.99e-39;24!UBERON:0000305;3.62e-29;7!UBERON:0001013;6.32e-20;14!UBERON:0001987;4.27e-19;4!UBERON:0003124;1.15e-11;3!UBERON:0000920;1.15e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.69e-56,14;UBERON:0000158,1.69e-56,14;UBERON:0000478,6.03e-39,24;UBERON:0000305,3.64e-29,7;UBERON:0003124,6.48e-29,7;UBERON:0004871,1.63e-25,8;UBERON:0001013,5.82e-20,14;UBERON:0001987,3.57e-19,4;UBERON:0004340,3.57e-19,4;UBERON:0004923,5.11e-13,66;UBERON:0000920,1.29e-11,3 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,1.26343974685366,0,0,0,3.05817920982241,2.90143676051299,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0.570471821544449,1.19558944441441,0,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0.831192346452549,0,0,0,0.113432183160021,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.824420233907511,0,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0.736399189138395,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0,0.330881918197182,0.435758888184812,0,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0,0,4.24378600024763,1.66435439510497,6.65258645325297,0.248107807818777,0,0.280660094433074,0,0,0,0,0.308419387605311,0.355123450626254,0.574890092096664,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0.334330152832435,0,1.43246690842614,14.8482340416319,3.37876772309155,0,0,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,2.23300811812344,1.28236630762607,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0.19351266257817,0.292357268344742,0.410577285266046,0,0,0,0,0,0,0,0,0,1.79828648623917,0,0,0,0,0,0,0.815425236441684,1.15063130943567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0.714695326373367,0,1.017074150619,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49254802886874,0,0.554805861502613,0,0,1.77962244319307,0.228840068396924,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,1.34699795506368,0,2.11881813448034,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.256241518587947,3.79973375904318,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.0636471582781649,0,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0.642301571672949,0,0,0,0,0,1.26343974685366,0,0,0,3.05817920982241,2.90143676051299,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0.570471821544449,1.19558944441441,0,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0.831192346452549,0,0,0,0.113432183160021,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.824420233907511,0,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0.736399189138395,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0,0.330881918197182,0.435758888184812,0,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0,0,4.24378600024763,1.66435439510497,6.65258645325297,0.248107807818777,0,0.280660094433074,0,0,0,0,0.308419387605311,0.355123450626254,0.574890092096664,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0.334330152832435,0,1.43246690842614,14.8482340416319,3.37876772309155,0,0,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,2.23300811812344,1.28236630762607,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0.19351266257817,0.292357268344742,0.410577285266046,0,0,0,0,0,0,0,0,0,1.79828648623917,0,0,0,0,0,0,0.815425236441684,1.15063130943567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0.714695326373367,0,1.017074150619,0,0,0.326587360109409,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0.855434189421647,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49254802886874,0,0.554805861502613,0,0,1.77962244319307,0.228840068396924,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,1.34699795506368,0,2.11881813448034,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.256241518587947,3.79973375904318,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0.0636471582781649,0,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p6@S100A3 | |short_description=p6@S100A3 | ||
}} | }} |
Latest revision as of 05:50, 17 September 2015
Short description: | p6@S100A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_S100A3_5end |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | 0bp_to_BT006955, CR542163, CR542185, DQ891433, DQ894608_5end |
EntrezGene: | S100A3 |
HGNC: | 10493 |
UniProt: | P33764 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.20e-49 | 19 |
placental epithelial cell | 2.37e-25 | 3 |
mesenchymal stem cell of adipose | 8.51e-25 | 8 |
amniotic epithelial cell | 1.91e-17 | 2 |
amnion mesenchymal stem cell | 2.25e-15 | 5 |
chorionic membrane mesenchymal stem cell | 1.29e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.69e-56 | 14 |
membranous layer | 1.69e-56 | 14 |
extraembryonic structure | 6.03e-39 | 24 |
amnion | 3.64e-29 | 7 |
chorion | 6.48e-29 | 7 |
somatic layer of lateral plate mesoderm | 1.63e-25 | 8 |
adipose tissue | 5.82e-20 | 14 |
placenta | 3.57e-19 | 4 |
allantois | 3.57e-19 | 4 |
organ component layer | 5.11e-13 | 66 |
egg chorion | 1.29e-11 | 3 |