FFCP PHASE1:Hg19::chr7:142659407..142659456,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3792 | |EntrezGene=3792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6308 | |HGNC=6308 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETW3 | |UniProt=E7ETW3 | ||
|association_with_transcript=0bp_to_ENST00000467543,ENST00000479768_5end | |association_with_transcript=0bp_to_ENST00000467543,ENST00000479768_5end | ||
|cluster_id=chr7:142659407..142659456,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_1_at_KEL_5end | |description=CAGE_peak_1_at_KEL_5end | ||
|id=chr7:142659407..142659456,- | |id=chr7:142659407..142659456,- | ||
|ontology_enrichment_celltype=CL:0002322!2.76e-10!5 | |ontology_enrichment_celltype=CL:0002322!2.76e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.43e-16;5!CL:0000764;9.55e-09;2!CL:0000558;9.55e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.20e-16,5;CL:0000764,9.55e-09,2;CL:0000765,9.55e-09,2;CL:0000050,9.55e-09,2;CL:0000038,9.55e-09,2;CL:0000558,9.55e-09,2;CL:0000547,9.55e-09,2;CL:0000549,9.55e-09,2;CL:0000550,9.55e-09,2;CL:0000552,9.55e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;9.30e-08;7 | |||
|ontology_enrichment_disease=DOID:1036!6.97e-10!8;DOID:8692!2.11e-07!31 | |ontology_enrichment_disease=DOID:1036!6.97e-10!8;DOID:8692!2.11e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.84e-16;8!DOID:8692;1.01e-11;31!DOID:1240;2.89e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.99e-16,8;DOID:8692,7.01e-12,31;DOID:1240,5.95e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-15!115;UBERON:0000178!8.76e-10!15;UBERON:0000179!8.76e-10!15;UBERON:0000463!8.76e-10!15 | |ontology_enrichment_uberon=UBERON:0007023!2.94e-15!115;UBERON:0000178!8.76e-10!15;UBERON:0000179!8.76e-10!15;UBERON:0000463!8.76e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-13;15!UBERON:0000179;1.81e-13;15!UBERON:0000463;1.81e-13;15!UBERON:0002390;6.65e-10;32!UBERON:0000922;2.82e-09;49!UBERON:0001905;5.41e-08;2!UBERON:0002757;5.41e-08;2!UBERON:0010134;5.41e-08;2!UBERON:0005408;5.41e-08;2!UBERON:0001899;5.41e-08;2!UBERON:0002193;8.01e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.83e-13,15;UBERON:0000179,1.83e-13,15;UBERON:0000463,1.83e-13,15;UBERON:0007023,5.70e-09,114;UBERON:0001905,5.31e-08,2;UBERON:0002757,5.31e-08,2;UBERON:0010134,5.31e-08,2;UBERON:0005408,5.31e-08,2;UBERON:0001899,5.31e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.80254281490768,11.8522838148785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.312033096785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,4.24095258628753,5.92589108634544,2.59152637538426,3.02785021050754,5.83963774521328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,217.286537756121,198.4295073279,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,12.6861902308042,10.7049208999933,10.8232965563091,0.952927101831156,1.23408681925858,7.13320642311989,8.10047155857172,6.34500141035416,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,59.0819514949019,9.19549306818343,0,46.5257116789903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.9860377143621,29.3274358802335,46.4668206333043,38.7667865914197,79.6965677441577,47.3631005361528,0,0,0.141353071433941,0,0,0,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0,0,0,8.46935012340647,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0,1.34366944973453,0,0,0,0,0,1.18112977817699,0,0,0,3.69732241469544,0.275078873194468,0,0,0,0,0,0.236417121897595,1.04909176269996,0,0,0,0,0,0,0,0,0,0,10.179472572918,0,0,0,41.0771355627886,0,0,0,0,1.06787412567695,7.8602152549833,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0,0,0,6.42842203053944,10.7610791110024,0,0,0.532214220975833,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,2.3702041759909,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.971421986118279,0,0.198950775161368,0,0,0.439762066981716,0,0,78.2443226604167,0,0,0,0.392616934229891,0,1.2679671827502,0,2.72553362141575,15.5988088896057,0,0,0,0,0.730336388246517,1.83491713361816,0,0,0,0.872701380680755,5.290268405154,0,0,0,0.126166424835079,0,12.0363575960865,0.101988829741982,0,0,0,12.8823786971007,31.6197673584291,0,0.103432995861895,6.82348742083139,0.23806443146374,0.129177819672012,1.11734485732544,0,0,0,0,0,2.35732185551056,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0,2.61655931668334,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.80254281490768,11.8522838148785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.312033096785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,4.24095258628753,5.92589108634544,2.59152637538426,3.02785021050754,5.83963774521328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,217.286537756121,198.4295073279,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,12.6861902308042,10.7049208999933,10.8232965563091,0.952927101831156,1.23408681925858,7.13320642311989,8.10047155857172,6.34500141035416,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,59.0819514949019,9.19549306818343,0,46.5257116789903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.65770349318689,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.9860377143621,29.3274358802335,46.4668206333043,38.7667865914197,79.6965677441577,47.3631005361528,0,0,0.141353071433941,0,0,0,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0,0,0,8.46935012340647,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0,1.34366944973453,0,0,0,0,0,1.18112977817699,0,0,0,3.69732241469544,0.275078873194468,0,0,0,0,0,0.236417121897595,1.04909176269996,0,0,0,0,0,0,0,0,0,0,10.179472572918,0,0,0,41.0771355627886,0,0,0,0,1.06787412567695,7.8602152549833,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0.546974809018219,0,0,0,0,6.42842203053944,10.7610791110024,0,0,0.532214220975833,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,2.3702041759909,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.971421986118279,0,0.198950775161368,0,0,0.439762066981716,0,0,78.2443226604167,0,0,0,0.392616934229891,0,1.2679671827502,0,2.72553362141575,15.5988088896057,0,0,0,0,0.730336388246517,1.83491713361816,0,0,0,0.872701380680755,5.290268405154,0,0,0,0.126166424835079,0,12.0363575960865,0.101988829741982,0,0,0,12.8823786971007,31.6197673584291,0,0.103432995861895,6.82348742083139,0.23806443146374,0.129177819672012,1.11734485732544,0,0,0,0,0,2.35732185551056,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0,2.61655931668334,0 | ||
|short_description=p1@KEL | |short_description=p1@KEL | ||
}} | }} |
Latest revision as of 22:40, 16 September 2015
Short description: | p1@KEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KEL_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000467543, ENST00000479768_5end |
EntrezGene: | KEL |
HGNC: | 6308 |
UniProt: | E7ETW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.20e-16 | 5 |
erythroid lineage cell | 9.55e-09 | 2 |
erythroblast | 9.55e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 9.55e-09 | 2 |
erythroid progenitor cell | 9.55e-09 | 2 |
reticulocyte | 9.55e-09 | 2 |
proerythroblast | 9.55e-09 | 2 |
basophilic erythroblast | 9.55e-09 | 2 |
polychromatophilic erythroblast | 9.55e-09 | 2 |
orthochromatic erythroblast | 9.55e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.83e-13 | 15 |
haemolymphatic fluid | 1.83e-13 | 15 |
organism substance | 1.83e-13 | 15 |
adult organism | 5.70e-09 | 114 |
pineal body | 5.31e-08 | 2 |
regional part of epithalamus | 5.31e-08 | 2 |
secretory circumventricular organ | 5.31e-08 | 2 |
circumventricular organ | 5.31e-08 | 2 |
epithalamus | 5.31e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.99e-16 | 8 |
myeloid leukemia | 7.01e-12 | 31 |
leukemia | 5.95e-09 | 39 |