FFCP PHASE1:Hg19::chr11:64981336..64981339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29867 | |HGNC=29867 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000530038_5end | |association_with_transcript=-4bp_to_ENST00000530038_5end | ||
|cluster_id=chr11:64981336..64981339,+ | |||
|description=CAGE_peak_1_at_SLC22A20_5end | |description=CAGE_peak_1_at_SLC22A20_5end | ||
|id=chr11:64981336..64981339,+ | |id=chr11:64981336..64981339,+ | ||
|ontology_enrichment_celltype=CL:0002322!5.62e-30!5;CL:0000815!1.52e-12!2;CL:0000792!1.52e-12!2;CL:0002677!1.52e-12!2;CL:0000540!1.15e-09!6;CL:0000031!1.15e-09!6;CL:0000404!1.15e-09!6;CL:0000898!1.19e-08!3;CL:0000047!2.36e-07!8;CL:0002379!5.45e-07!1;CL:0002127!9.73e-07!1;CL:0000914!9.73e-07!1;CL:0000911!9.73e-07!1;CL:0000814!9.73e-07!1;CL:0002042!9.73e-07!1;CL:0002039!9.73e-07!1;CL:0002040!9.73e-07!1;CL:0002041!9.73e-07!1 | |ontology_enrichment_celltype=CL:0002322!5.62e-30!5;CL:0000815!1.52e-12!2;CL:0000792!1.52e-12!2;CL:0002677!1.52e-12!2;CL:0000540!1.15e-09!6;CL:0000031!1.15e-09!6;CL:0000404!1.15e-09!6;CL:0000898!1.19e-08!3;CL:0000047!2.36e-07!8;CL:0002379!5.45e-07!1;CL:0002127!9.73e-07!1;CL:0000914!9.73e-07!1;CL:0000911!9.73e-07!1;CL:0000814!9.73e-07!1;CL:0002042!9.73e-07!1;CL:0002039!9.73e-07!1;CL:0002040!9.73e-07!1;CL:0002041!9.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.00e-57;5!CL:0000540;1.23e-27;6!CL:0000404;1.23e-27;6!CL:0002321;1.32e-19;15!CL:0000148;3.43e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.80e-57,5;CL:0000540,1.47e-27,6;CL:0000031,1.47e-27,6;CL:0000404,1.47e-27,6;CL:0000047,7.25e-21,8;CL:0000148,3.63e-08,10;CL:0000541,3.63e-08,10;CL:0000133,1.86e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.23e-27;6 | |||
|ontology_enrichment_disease=DOID:9119!1.98e-07!1;DOID:3620!5.45e-07!1;DOID:3565!5.45e-07!1 | |ontology_enrichment_disease=DOID:9119!1.98e-07!1;DOID:3620!5.45e-07!1;DOID:3565!5.45e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:9119;3.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.25e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002370!8.62e-13!4;UBERON:0005058!8.62e-13!4;UBERON:0009113!8.62e-13!4;UBERON:0003295!8.62e-13!4;UBERON:0005562!8.62e-13!4;UBERON:0003351!1.06e-08!6;UBERON:0004177!1.59e-07!7 | |ontology_enrichment_uberon=UBERON:0002370!8.62e-13!4;UBERON:0005058!8.62e-13!4;UBERON:0009113!8.62e-13!4;UBERON:0003295!8.62e-13!4;UBERON:0005562!8.62e-13!4;UBERON:0003351!1.06e-08!6;UBERON:0004177!1.59e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@SLC22A20 | |short_description=p1@SLC22A20 | ||
}} | }} |
Latest revision as of 06:58, 19 September 2015
Short description: | p1@SLC22A20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC22A20_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000530038_5end |
EntrezGene: | NA |
HGNC: | 29867 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.80e-57 | 5 |
neuron | 1.47e-27 | 6 |
neuroblast | 1.47e-27 | 6 |
electrically signaling cell | 1.47e-27 | 6 |
neuronal stem cell | 7.25e-21 | 8 |
melanocyte | 3.63e-08 | 10 |
melanoblast | 3.63e-08 | 10 |
neurectodermal cell | 1.86e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.25e-19 | 1 |