FFCP PHASE1:Hg19::chr2:201171268..201171284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26010 | |EntrezGene=26010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |HGNC=24574 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2S1,Q4ZFW0,F8VT91 | |UniProt=F2Z2S1,Q4ZFW0,F8VT91 | ||
|association_with_transcript=0bp_to_ENST00000423749,ENST00000428692,ENST00000457757,ENST00000471601_5end | |association_with_transcript=0bp_to_ENST00000423749,ENST00000428692,ENST00000457757,ENST00000471601_5end | ||
|cluster_id=chr2:201171268..201171284,+ | |||
|description=CAGE_peak_2_at_SPATS2L_5end | |description=CAGE_peak_2_at_SPATS2L_5end | ||
|id=chr2:201171268..201171284,+ | |id=chr2:201171268..201171284,+ | ||
|ontology_enrichment_celltype=CL:0000223!1.92e-09!59;CL:0000066!6.93e-08!254;CL:0000220!9.02e-08!246;CL:0002321!1.17e-07!248 | |ontology_enrichment_celltype=CL:0000223!1.92e-09!59;CL:0000066!6.93e-08!254;CL:0000220!9.02e-08!246;CL:0002321!1.17e-07!248 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.31e-10,58;CL:0000066,5.97e-08,253;CL:0002321,1.46e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.13e-24!365;UBERON:0000481!5.92e-21!347;UBERON:0000468!1.46e-16!659;UBERON:0000062!3.01e-16!511;UBERON:0000467!4.15e-16!625;UBERON:0000480!7.66e-16!626;UBERON:0004119!1.34e-14!169;UBERON:0000925!1.34e-14!169;UBERON:0006595!1.34e-14!169;UBERON:0001007!9.35e-14!155;UBERON:0001555!9.35e-14!155;UBERON:0007026!9.35e-14!155;UBERON:0004111!3.15e-13!241;UBERON:0000477!4.02e-13!286;UBERON:0000119!7.91e-13!312;UBERON:0000483!1.91e-12!309;UBERON:0003104!7.04e-12!238;UBERON:0009142!7.04e-12!238;UBERON:0000922!1.90e-11!612;UBERON:0002050!4.63e-11!605;UBERON:0005423!4.63e-11!605;UBERON:0000923!6.47e-11!604;UBERON:0005291!6.47e-11!604;UBERON:0006598!6.47e-11!604;UBERON:0002532!6.47e-11!604;UBERON:0000033!1.32e-10!123;UBERON:0000153!1.94e-10!129;UBERON:0007811!1.94e-10!129;UBERON:0005911!3.09e-10!82;UBERON:0002100!3.25e-10!216;UBERON:0003102!6.90e-10!95;UBERON:0000077!1.75e-09!130;UBERON:0004921!2.53e-09!129;UBERON:0004185!2.53e-09!129;UBERON:0000161!5.52e-09!35;UBERON:0004121!1.02e-08!169;UBERON:0005256!1.86e-08!143;UBERON:0000025!5.38e-08!194;UBERON:0000924!9.27e-08!173;UBERON:0006601!9.27e-08!173;UBERON:0003929!9.69e-08!54;UBERON:0000064!1.07e-07!219;UBERON:0000955!6.80e-07!69;UBERON:0006238!6.80e-07!69;UBERON:0001950!8.64e-07!20;UBERON:0002619!9.26e-07!22 | |ontology_enrichment_uberon=UBERON:0000475!3.13e-24!365;UBERON:0000481!5.92e-21!347;UBERON:0000468!1.46e-16!659;UBERON:0000062!3.01e-16!511;UBERON:0000467!4.15e-16!625;UBERON:0000480!7.66e-16!626;UBERON:0004119!1.34e-14!169;UBERON:0000925!1.34e-14!169;UBERON:0006595!1.34e-14!169;UBERON:0001007!9.35e-14!155;UBERON:0001555!9.35e-14!155;UBERON:0007026!9.35e-14!155;UBERON:0004111!3.15e-13!241;UBERON:0000477!4.02e-13!286;UBERON:0000119!7.91e-13!312;UBERON:0000483!1.91e-12!309;UBERON:0003104!7.04e-12!238;UBERON:0009142!7.04e-12!238;UBERON:0000922!1.90e-11!612;UBERON:0002050!4.63e-11!605;UBERON:0005423!4.63e-11!605;UBERON:0000923!6.47e-11!604;UBERON:0005291!6.47e-11!604;UBERON:0006598!6.47e-11!604;UBERON:0002532!6.47e-11!604;UBERON:0000033!1.32e-10!123;UBERON:0000153!1.94e-10!129;UBERON:0007811!1.94e-10!129;UBERON:0005911!3.09e-10!82;UBERON:0002100!3.25e-10!216;UBERON:0003102!6.90e-10!95;UBERON:0000077!1.75e-09!130;UBERON:0004921!2.53e-09!129;UBERON:0004185!2.53e-09!129;UBERON:0000161!5.52e-09!35;UBERON:0004121!1.02e-08!169;UBERON:0005256!1.86e-08!143;UBERON:0000025!5.38e-08!194;UBERON:0000924!9.27e-08!173;UBERON:0006601!9.27e-08!173;UBERON:0003929!9.69e-08!54;UBERON:0000064!1.07e-07!219;UBERON:0000955!6.80e-07!69;UBERON:0006238!6.80e-07!69;UBERON:0001950!8.64e-07!20;UBERON:0002619!9.26e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.15e-07;20!UBERON:0002619;7.92e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.28e-16,223;UBERON:0004119,2.99e-13,160;UBERON:0000925,2.99e-13,160;UBERON:0006595,2.99e-13,160;UBERON:0004111,3.78e-13,240;UBERON:0001007,1.51e-12,145;UBERON:0001555,1.51e-12,145;UBERON:0007026,1.51e-12,145;UBERON:0000119,1.69e-12,309;UBERON:0000483,4.03e-12,306;UBERON:0003102,1.72e-10,99;UBERON:0005911,3.48e-10,82;UBERON:0000922,2.36e-09,592;UBERON:0000161,3.32e-09,36;UBERON:0002100,1.80e-08,199;UBERON:0002050,3.12e-08,564;UBERON:0005423,3.38e-08,581;UBERON:0004921,4.55e-08,118;UBERON:0000025,8.99e-08,192;UBERON:0003929,1.00e-07,54;UBERON:0004121,1.01e-07,171;UBERON:0000924,1.01e-07,171;UBERON:0006601,1.01e-07,171;UBERON:0000923,1.61e-07,560;UBERON:0010316,1.61e-07,560;UBERON:0005291,1.61e-07,560;UBERON:0006598,1.61e-07,560;UBERON:0010317,1.61e-07,560;UBERON:0002532,1.61e-07,560;UBERON:0003104,4.17e-07,160;UBERON:0009142,4.17e-07,160;UBERON:0005256,7.06e-07,122;UBERON:0001950,8.43e-07,20;UBERON:0002619,9.04e-07,22 | |||
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| ||
|short_description=p2@SPATS2L | |short_description=p2@SPATS2L | ||
}} | }} |
Latest revision as of 10:13, 19 September 2015
Short description: | p2@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPATS2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000423749, ENST00000428692, ENST00000457757, ENST00000471601_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | F2Z2S1Q4ZFW0F8VT91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.31e-10 | 58 |
epithelial cell | 5.97e-08 | 253 |
embryonic cell | 1.46e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.28e-16 | 223 |
endoderm-derived structure | 2.99e-13 | 160 |
endoderm | 2.99e-13 | 160 |
presumptive endoderm | 2.99e-13 | 160 |
anatomical conduit | 3.78e-13 | 240 |
digestive system | 1.51e-12 | 145 |
digestive tract | 1.51e-12 | 145 |
primitive gut | 1.51e-12 | 145 |
cell layer | 1.69e-12 | 309 |
epithelium | 4.03e-12 | 306 |
surface structure | 1.72e-10 | 99 |
endo-epithelium | 3.48e-10 | 82 |
embryo | 2.36e-09 | 592 |
orifice | 3.32e-09 | 36 |
trunk | 1.80e-08 | 199 |
embryonic structure | 3.12e-08 | 564 |
developing anatomical structure | 3.38e-08 | 581 |
subdivision of digestive tract | 4.55e-08 | 118 |
tube | 8.99e-08 | 192 |
gut epithelium | 1.00e-07 | 54 |
ectoderm-derived structure | 1.01e-07 | 171 |
ectoderm | 1.01e-07 | 171 |
presumptive ectoderm | 1.01e-07 | 171 |
germ layer | 1.61e-07 | 560 |
germ layer / neural crest | 1.61e-07 | 560 |
embryonic tissue | 1.61e-07 | 560 |
presumptive structure | 1.61e-07 | 560 |
germ layer / neural crest derived structure | 1.61e-07 | 560 |
epiblast (generic) | 1.61e-07 | 560 |
mesenchyme | 4.17e-07 | 160 |
entire embryonic mesenchyme | 4.17e-07 | 160 |
trunk mesenchyme | 7.06e-07 | 122 |
neocortex | 8.43e-07 | 20 |
regional part of cerebral cortex | 9.04e-07 | 22 |