FFCP PHASE1:Hg19::chr6:123958141..123958179,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6E3 | |UniProt=F5H6E3 | ||
|association_with_transcript=-24bp_to_ENST00000542443_5end | |association_with_transcript=-24bp_to_ENST00000542443_5end | ||
|cluster_id=chr6:123958141..123958179,- | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_3_at_TRDN_5end | |description=CAGE_peak_3_at_TRDN_5end | ||
|id=chr6:123958141..123958179,- | |id=chr6:123958141..123958179,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.47e-09;82!UBERON:0005062;3.44e-08;4!UBERON:0007284;3.44e-08;4!UBERON:0006603;2.69e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.68e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.76e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.16e-64!115;UBERON:0001049!3.43e-23!57;UBERON:0005068!3.43e-23!57;UBERON:0006241!3.43e-23!57;UBERON:0007135!3.43e-23!57;UBERON:0003075!6.50e-21!86;UBERON:0007284!6.50e-21!86;UBERON:0002346!1.74e-19!90;UBERON:0002616!2.73e-17!59;UBERON:0005743!2.09e-16!86;UBERON:0001017!2.18e-16!82;UBERON:0000073!5.17e-15!94;UBERON:0001016!5.17e-15!94;UBERON:0000955!1.97e-14!69;UBERON:0006238!1.97e-14!69;UBERON:0002780!1.23e-13!41;UBERON:0001890!1.23e-13!41;UBERON:0006240!1.23e-13!41;UBERON:0003080!3.50e-13!42;UBERON:0003076!2.16e-12!15;UBERON:0003057!2.16e-12!15;UBERON:0004121!7.53e-12!169;UBERON:0000153!1.05e-11!129;UBERON:0007811!1.05e-11!129;UBERON:0000924!2.72e-11!173;UBERON:0006601!2.72e-11!173;UBERON:0002308!3.66e-11!9;UBERON:0000125!3.66e-11!9;UBERON:0002420!4.37e-11!9;UBERON:0007245!4.37e-11!9;UBERON:0010009!4.37e-11!9;UBERON:0010011!4.37e-11!9;UBERON:0000454!4.37e-11!9;UBERON:0002298!2.89e-10!8;UBERON:0000033!3.30e-10!123;UBERON:0002020!1.17e-09!34;UBERON:0003528!1.17e-09!34;UBERON:0004732!1.45e-09!13;UBERON:0001893!2.30e-09!34;UBERON:0003056!2.80e-09!61;UBERON:0002791!1.36e-08!33;UBERON:0009663!2.65e-08!7;UBERON:0004733!2.91e-08!12;UBERON:0002028!2.91e-08!12;UBERON:0007277!2.91e-08!12;UBERON:0003296!5.78e-08!4;UBERON:0010133!5.78e-08!4;UBERON:0001869!1.33e-07!32;UBERON:0003978!3.21e-07!3;UBERON:0009751!3.21e-07!3;UBERON:0000946!3.21e-07!3;UBERON:0002523!3.21e-07!3;UBERON:0005983!3.21e-07!3;UBERON:0002165!3.21e-07!3;UBERON:0002062!3.21e-07!3;UBERON:0007280!3.21e-07!3;UBERON:0004151!3.34e-07!3;UBERON:0003103!5.29e-07!69;UBERON:0004111!5.43e-07!241;UBERON:0000369!7.99e-07!4;UBERON:0002435!7.99e-07!4;UBERON:0000204!7.99e-07!4;UBERON:0010082!7.99e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!5.16e-64!115;UBERON:0001049!3.43e-23!57;UBERON:0005068!3.43e-23!57;UBERON:0006241!3.43e-23!57;UBERON:0007135!3.43e-23!57;UBERON:0003075!6.50e-21!86;UBERON:0007284!6.50e-21!86;UBERON:0002346!1.74e-19!90;UBERON:0002616!2.73e-17!59;UBERON:0005743!2.09e-16!86;UBERON:0001017!2.18e-16!82;UBERON:0000073!5.17e-15!94;UBERON:0001016!5.17e-15!94;UBERON:0000955!1.97e-14!69;UBERON:0006238!1.97e-14!69;UBERON:0002780!1.23e-13!41;UBERON:0001890!1.23e-13!41;UBERON:0006240!1.23e-13!41;UBERON:0003080!3.50e-13!42;UBERON:0003076!2.16e-12!15;UBERON:0003057!2.16e-12!15;UBERON:0004121!7.53e-12!169;UBERON:0000153!1.05e-11!129;UBERON:0007811!1.05e-11!129;UBERON:0000924!2.72e-11!173;UBERON:0006601!2.72e-11!173;UBERON:0002308!3.66e-11!9;UBERON:0000125!3.66e-11!9;UBERON:0002420!4.37e-11!9;UBERON:0007245!4.37e-11!9;UBERON:0010009!4.37e-11!9;UBERON:0010011!4.37e-11!9;UBERON:0000454!4.37e-11!9;UBERON:0002298!2.89e-10!8;UBERON:0000033!3.30e-10!123;UBERON:0002020!1.17e-09!34;UBERON:0003528!1.17e-09!34;UBERON:0004732!1.45e-09!13;UBERON:0001893!2.30e-09!34;UBERON:0003056!2.80e-09!61;UBERON:0002791!1.36e-08!33;UBERON:0009663!2.65e-08!7;UBERON:0004733!2.91e-08!12;UBERON:0002028!2.91e-08!12;UBERON:0007277!2.91e-08!12;UBERON:0003296!5.78e-08!4;UBERON:0010133!5.78e-08!4;UBERON:0001869!1.33e-07!32;UBERON:0003978!3.21e-07!3;UBERON:0009751!3.21e-07!3;UBERON:0000946!3.21e-07!3;UBERON:0002523!3.21e-07!3;UBERON:0005983!3.21e-07!3;UBERON:0002165!3.21e-07!3;UBERON:0002062!3.21e-07!3;UBERON:0007280!3.21e-07!3;UBERON:0004151!3.34e-07!3;UBERON:0003103!5.29e-07!69;UBERON:0004111!5.43e-07!241;UBERON:0000369!7.99e-07!4;UBERON:0002435!7.99e-07!4;UBERON:0000204!7.99e-07!4;UBERON:0010082!7.99e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.34e-12;4!UBERON:0010133;4.34e-12;4!UBERON:0007023;7.89e-12;114!UBERON:0007100;4.10e-11;25!UBERON:0003978;8.29e-11;3!UBERON:0000946;8.29e-11;3!UBERON:0004151;8.85e-11;3!UBERON:0001894;2.69e-10;7!UBERON:0005090;4.97e-08;2!UBERON:0001630;4.97e-08;2!UBERON:0002298;5.47e-08;6!UBERON:0000341;7.87e-08;2!UBERON:0002081;1.02e-07;2!UBERON:0002133;1.09e-07;2!UBERON:0004732;1.98e-07;13!UBERON:0000007;3.46e-07;2!UBERON:0003127;4.50e-07;2!UBERON:0002784;7.00e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.11e-43,114;UBERON:0010314,1.07e-12,132;UBERON:0003296,5.12e-12,4;UBERON:0010133,5.12e-12,4;UBERON:0003978,8.31e-11,3;UBERON:0009751,8.31e-11,3;UBERON:0000946,8.31e-11,3;UBERON:0002523,8.31e-11,3;UBERON:0005983,8.31e-11,3;UBERON:0002165,8.31e-11,3;UBERON:0002062,8.31e-11,3;UBERON:0007280,8.31e-11,3;UBERON:0004151,8.86e-11,3;UBERON:0003075,1.77e-10,82;UBERON:0007284,1.77e-10,82;UBERON:0001894,3.52e-10,7;UBERON:0006222,3.52e-10,7;UBERON:0007100,3.72e-10,27;UBERON:0002346,9.06e-10,86;UBERON:0003103,1.64e-09,68;UBERON:0001049,2.80e-09,56;UBERON:0005068,2.80e-09,56;UBERON:0006241,2.80e-09,56;UBERON:0007135,2.80e-09,56;UBERON:0003076,1.07e-08,15;UBERON:0003057,1.07e-08,15;UBERON:0010371,3.09e-08,104;UBERON:0005090,4.97e-08,2;UBERON:0001630,4.97e-08,2;UBERON:0002298,6.88e-08,6;UBERON:0000341,7.88e-08,2;UBERON:0002081,1.02e-07,2;UBERON:0010227,1.02e-07,2;UBERON:0002133,1.09e-07,2;UBERON:0004732,2.16e-07,13;UBERON:0000073,2.43e-07,53;UBERON:0002616,2.43e-07,53;UBERON:0000007,3.41e-07,2;UBERON:0003127,3.86e-07,2;UBERON:0002784,9.34e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,1.18785872333055,0,0.994147647766298,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,1.52581736317083,0.995213339381022,0,0.438770794307945,0,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,64.2062117839031,0,0,0,0,2.36750641709634,0,0,1.01098527405581,0,0,0,0,0,0,0,0.138674673013139,0,0,0,7.33852006616527,0,0,0,0,2.5217144286989,0,6.77942222341597,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,34.072452955215,46.2904056503601,13.6395874669595,6.38972801596772,16.7398158773263,31.0208325844203,14.98191436454,0,0,0,0,0.0674035438541849,0,0,0,4.76711921390515,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,38.5935476241618,33.1045985182716,0,0,0.864221491201268,0,0,0,0,0,0,0,1.16354660725395,1.3223260174269,0,0,0,0.314408610199332,0,0,0,0,0,9.79232046065053,4.7631079864313,11.0284407634846,2.62298104567844,0,0,0.610131324509816,0.500763722825999,2.29363678276028,3.10601344303186,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,4.36219904425692,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,37.2158383791971,0,0,1.60710550763486,1.00885116665647,2.42786241694653,7.96817669729542,0,0,0,0.203909198930495,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,2.7875852228896,0,6.39327839524689,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,220.125804643884,129.252473832015,17.397216470073,16.9998847570699,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,10.0995776111209,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,1.37618785021362,3.15347082933193,0,0,0,0,0,0,0,0,0,11.4028650910293,0,0,0,0,2.8795905322931,0.535928260312357,0,1.03432995861895,47.1247100001168,19.283218948563,0.0645889098360061,0,0,1.40023748211963,4.44657815708082,63.1378568901188,81.4515256582969,1.01028079521881,1.64961072403156,14.3043953314786,0,0,0,0,2.34640942403454,1.4668973301944,0.406896178315738,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.68203280042692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,1.18785872333055,0,0.994147647766298,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.241192877250816,1.52581736317083,0.995213339381022,0,0.438770794307945,0,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,64.2062117839031,0,0,0,0,2.36750641709634,0,0,1.01098527405581,0,0,0,0,0,0,0,0.138674673013139,0,0,0,7.33852006616527,0,0,0,0,2.5217144286989,0,6.77942222341597,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,34.072452955215,46.2904056503601,13.6395874669595,6.38972801596772,16.7398158773263,31.0208325844203,14.98191436454,0,0,0,0,0.0674035438541849,0,0,0,4.76711921390515,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,38.5935476241618,33.1045985182716,0,0,0.864221491201268,0,0,0,0,0,0,0,1.16354660725395,1.3223260174269,0,0,0,0.314408610199332,0,0,0,0,0,9.79232046065053,4.7631079864313,11.0284407634846,2.62298104567844,0,0,0.610131324509816,0.500763722825999,2.29363678276028,3.10601344303186,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,4.36219904425692,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,37.2158383791971,0,0,1.60710550763486,1.00885116665647,2.42786241694653,7.96817669729542,0,0,0,0.203909198930495,0,0,0,0.156986185701028,0.314231179832004,0,0,0,0,2.7875852228896,0,6.39327839524689,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,220.125804643884,129.252473832015,17.397216470073,16.9998847570699,0,0,0,0,0,0,0,0,0,0,0,2.35570160537934,10.0995776111209,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,1.37618785021362,3.15347082933193,0,0,0,0,0,0,0,0,0,11.4028650910293,0,0,0,0,2.8795905322931,0.535928260312357,0,1.03432995861895,47.1247100001168,19.283218948563,0.0645889098360061,0,0,1.40023748211963,4.44657815708082,63.1378568901188,81.4515256582969,1.01028079521881,1.64961072403156,14.3043953314786,0,0,0,0,2.34640942403454,1.4668973301944,0.406896178315738,0,1.20764276154616,0 | ||
|short_description=p3@TRDN | |short_description=p3@TRDN | ||
}} | }} |
Latest revision as of 06:18, 20 September 2015
Short description: | p3@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRDN_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -24bp_to_ENST00000542443_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | F5H6E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.76e-07 | 2 |