FFCP PHASE1:Hg19::chr12:208224..208235,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:208224..208235,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_at_chr12:208224..208235,+ | |description=CAGE_peak_at_chr12:208224..208235,+ | ||
|id=chr12:208224..208235,+ | |id=chr12:208224..208235,+ | ||
|ontology_enrichment_celltype=CL:0002586!1.54e-66!3;CL:0000149!3.69e-50!4;CL:0000147!1.53e-25!14;CL:0002575!2.90e-12!2;CL:0000325!1.86e-09!39;CL:0002563!8.61e-07!4 | |ontology_enrichment_celltype=CL:0002586!1.54e-66!3;CL:0000149!3.69e-50!4;CL:0000147!1.53e-25!14;CL:0002575!2.90e-12!2;CL:0000325!1.86e-09!39;CL:0002563!8.61e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!7.40e-71!5;UBERON:0005388!7.40e-71!5;UBERON:0001802!7.40e-71!5;UBERON:0001781!1.54e-66!3;UBERON:0001782!1.54e-66!3;UBERON:0005424!1.54e-66!3;UBERON:0000019!4.19e-19!19;UBERON:0000047!4.19e-19!19;UBERON:0004088!4.19e-19!19;UBERON:0003072!4.19e-19!19;UBERON:0003071!4.19e-19!19;UBERON:0004128!4.19e-19!19;UBERON:0007625!8.66e-19!11;UBERON:0000970!3.57e-18!20;UBERON:0002104!2.48e-17!21;UBERON:0001456!2.48e-17!21;UBERON:0000020!7.24e-16!23;UBERON:0001032!3.18e-15!24;UBERON:0004456!3.18e-15!24;UBERON:0005085!1.12e-12!29;UBERON:0001896!9.66e-09!3;UBERON:0005290!9.66e-09!3;UBERON:0010096!9.66e-09!3;UBERON:0001444!8.42e-08!48;UBERON:0001242!8.61e-07!4;UBERON:0001262!8.61e-07!4;UBERON:0004786!8.61e-07!4;UBERON:0004808!8.61e-07!4;UBERON:0001277!8.61e-07!4 | |ontology_enrichment_uberon=UBERON:0000966!7.40e-71!5;UBERON:0005388!7.40e-71!5;UBERON:0001802!7.40e-71!5;UBERON:0001781!1.54e-66!3;UBERON:0001782!1.54e-66!3;UBERON:0005424!1.54e-66!3;UBERON:0000019!4.19e-19!19;UBERON:0000047!4.19e-19!19;UBERON:0004088!4.19e-19!19;UBERON:0003072!4.19e-19!19;UBERON:0003071!4.19e-19!19;UBERON:0004128!4.19e-19!19;UBERON:0007625!8.66e-19!11;UBERON:0000970!3.57e-18!20;UBERON:0002104!2.48e-17!21;UBERON:0001456!2.48e-17!21;UBERON:0000020!7.24e-16!23;UBERON:0001032!3.18e-15!24;UBERON:0004456!3.18e-15!24;UBERON:0005085!1.12e-12!29;UBERON:0001896!9.66e-09!3;UBERON:0005290!9.66e-09!3;UBERON:0010096!9.66e-09!3;UBERON:0001444!8.42e-08!48;UBERON:0001242!8.61e-07!4;UBERON:0001262!8.61e-07!4;UBERON:0004786!8.61e-07!4;UBERON:0004808!8.61e-07!4;UBERON:0001277!8.61e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
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|short_description=p@chr12:208224..208235,+ | |short_description=p@chr12:208224..208235,+ | ||
}} | }} |
Latest revision as of 07:27, 24 July 2015
Short description: | p@chr12:208224..208235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:208224..208235, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |