FFCP PHASE1:Hg19::chr1:203595941..203595970,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:203595941..203595970,+
|short_description=p1@ATP2B4
|description=CAGE_peak_1_at_ATP2B4_5end
|association_with_transcript=13bp_to_ENST00000367218,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=493 | |EntrezGene=493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=817 | |HGNC=817 | ||
|TSSclassifier=strong | |||
|UniProt=P23634 | |UniProt=P23634 | ||
|association_with_transcript=13bp_to_ENST00000367218,ENST00000367219,ENST00000391954,uc001gzv.2,uc001gzw.2_5end | |||
|cluster_id=chr1:203595941..203595970,+ | |||
|coexpression_cluster_id=C3922 | |||
|description=CAGE_peak_1_at_ATP2B4_5end | |||
|id=chr1:203595941..203595970,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.19e-12!180;CL:0000057!2.29e-11!75;CL:0002620!3.42e-11!23;CL:0000680!3.41e-08!57;CL:0000056!3.41e-08!57;CL:0000355!3.41e-08!57;CL:0000187!8.54e-08!54;CL:0000222!1.51e-07!119;CL:0000359!3.59e-07!32;CL:0000192!4.45e-07!42;CL:0000514!4.45e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.37e-11;23!CL:0000359;9.59e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.93e-12,76;CL:0002620,3.42e-11,23;CL:0000680,1.65e-08,58;CL:0000056,1.65e-08,58;CL:0000355,1.65e-08,58;CL:0000187,4.14e-08,55;CL:0000222,9.19e-08,121;CL:0000192,2.11e-07,43;CL:0000514,2.11e-07,43;CL:0000359,3.59e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.81e-14!84;UBERON:0001981!6.38e-12!60;UBERON:0007500!6.38e-12!60;UBERON:0004537!6.38e-12!60;UBERON:0006965!6.38e-12!60;UBERON:0000055!2.02e-11!69;UBERON:0000914!2.14e-11!83;UBERON:0002329!2.14e-11!83;UBERON:0003077!2.14e-11!83;UBERON:0003059!2.14e-11!83;UBERON:0007282!2.14e-11!83;UBERON:0009618!2.14e-11!83;UBERON:0007285!2.14e-11!83;UBERON:0001009!5.68e-11!113;UBERON:0004535!3.07e-10!110;UBERON:0002049!4.57e-10!79;UBERON:0007798!4.57e-10!79;UBERON:0001637!6.02e-10!42;UBERON:0003509!6.02e-10!42;UBERON:0004572!6.02e-10!42;UBERON:0004290!8.34e-10!70;UBERON:0000486!2.58e-09!82;UBERON:0004573!8.85e-09!33;UBERON:0004571!8.85e-09!33;UBERON:0003914!1.39e-08!118;UBERON:0002385!1.77e-08!63;UBERON:0001015!1.77e-08!63;UBERON:0000383!1.77e-08!63;UBERON:0002097!3.00e-08!40;UBERON:0005256!4.28e-08!143;UBERON:0002199!5.30e-08!45;UBERON:0002416!5.30e-08!45;UBERON:0001134!6.35e-08!61;UBERON:0002036!6.35e-08!61;UBERON:0003082!6.35e-08!61;UBERON:0003102!6.97e-08!95;UBERON:0000475!7.57e-08!365;UBERON:0007023!2.15e-07!115;UBERON:0005631!4.64e-07!14;UBERON:0000158!4.64e-07!14;UBERON:0004923!5.06e-07!57;UBERON:0000947!5.20e-07!21;UBERON:0010191!5.20e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.03e-08;33!UBERON:0004571;4.03e-08;33!UBERON:0001637;1.01e-07;42!UBERON:0003509;1.01e-07;42!UBERON:0004572;1.01e-07;42!UBERON:0000947;5.16e-07;21!UBERON:0010191;5.16e-07;21!UBERON:0002097;9.35e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.89e-14,83;UBERON:0007500,1.74e-11,59;UBERON:0001981,1.74e-11,59;UBERON:0004537,1.74e-11,59;UBERON:0006965,1.74e-11,59;UBERON:0000055,5.24e-11,68;UBERON:0001009,1.29e-10,112;UBERON:0003077,2.16e-10,72;UBERON:0007285,2.16e-10,72;UBERON:0007524,3.53e-10,73;UBERON:0002329,3.98e-10,71;UBERON:0003059,3.98e-10,71;UBERON:0007282,3.98e-10,71;UBERON:0004290,3.98e-10,71;UBERON:0009618,3.98e-10,71;UBERON:0001637,6.01e-10,42;UBERON:0003509,6.01e-10,42;UBERON:0004572,6.01e-10,42;UBERON:0004535,6.83e-10,109;UBERON:0002049,1.09e-09,78;UBERON:0007798,1.09e-09,78;UBERON:0000486,1.29e-09,83;UBERON:0007503,1.62e-09,78;UBERON:0002385,8.66e-09,64;UBERON:0001015,8.66e-09,64;UBERON:0000383,8.66e-09,64;UBERON:0004573,8.84e-09,33;UBERON:0004571,8.84e-09,33;UBERON:0002097,1.11e-08,41;UBERON:0002199,2.04e-08,46;UBERON:0002416,2.04e-08,46;UBERON:0003914,2.31e-08,117;UBERON:0001134,3.14e-08,62;UBERON:0002036,3.14e-08,62;UBERON:0003082,3.14e-08,62;UBERON:0003102,4.27e-08,99;UBERON:0005256,1.12e-07,122;UBERON:0004923,1.65e-07,66;UBERON:0007023,3.17e-07,114;UBERON:0005631,4.64e-07,14;UBERON:0000158,4.64e-07,14;UBERON:0000947,5.20e-07,21;UBERON:0010191,5.20e-07,21 | |||
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| ||
|short_description=p1@ATP2B4 | |||
}} | }} |
Latest revision as of 23:31, 19 September 2015
Short description: | p1@ATP2B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP2B4_5end |
Coexpression cluster: | C3922_Fibroblast_uterus_basal_mesenchymal_smooth_mature_amniotic |
Association with transcript: | 13bp_to_ENST00000367218, ENST00000367219, ENST00000391954, uc001gzv.2, uc001gzw.2_5end |
EntrezGene: | ATP2B4 |
HGNC: | 817 |
UniProt: | P23634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.93e-12 | 76 |
skin fibroblast | 3.42e-11 | 23 |
muscle precursor cell | 1.65e-08 | 58 |
myoblast | 1.65e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-08 | 58 |
muscle cell | 4.14e-08 | 55 |
mesodermal cell | 9.19e-08 | 121 |
smooth muscle cell | 2.11e-07 | 43 |
smooth muscle myoblast | 2.11e-07 | 43 |
vascular associated smooth muscle cell | 3.59e-07 | 32 |