FFCP PHASE1:Hg19::chr16:29883805..29883810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:29883805..29883810,- | |||
|description=CAGE_peak_at_chr16:29883805..29883810,- | |description=CAGE_peak_at_chr16:29883805..29883810,- | ||
|id=chr16:29883805..29883810,- | |id=chr16:29883805..29883810,- | ||
|ontology_enrichment_celltype=CL:0000047!2.94e-07!8 | |ontology_enrichment_celltype=CL:0000047!2.94e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002591;9.12e-14;1!CL:0000540;3.14e-09;6!CL:0000404;3.14e-09;6!CL:0000047;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.54e-14,8;CL:0002591,1.42e-13,1;CL:0000540,3.42e-09,6;CL:0000031,3.42e-09,6;CL:0000404,3.42e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.14e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;1.59e-07;2!DOID:4236;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.45e-07,2;DOID:4236,1.45e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!7.63e-18!86;UBERON:0000073!2.56e-16!94;UBERON:0001016!2.56e-16!94;UBERON:0001017!3.24e-16!82;UBERON:0000955!8.67e-13!69;UBERON:0006238!8.67e-13!69;UBERON:0001049!1.73e-12!57;UBERON:0005068!1.73e-12!57;UBERON:0006241!1.73e-12!57;UBERON:0007135!1.73e-12!57;UBERON:0002346!2.40e-11!90;UBERON:0002616!7.02e-11!59;UBERON:0003075!7.39e-11!86;UBERON:0007284!7.39e-11!86;UBERON:0001893!1.25e-10!34;UBERON:0002020!1.28e-10!34;UBERON:0003528!1.28e-10!34;UBERON:0002780!2.02e-10!41;UBERON:0001890!2.02e-10!41;UBERON:0006240!2.02e-10!41;UBERON:0001950!2.85e-10!20;UBERON:0002619!4.81e-10!22;UBERON:0003080!5.41e-10!42;UBERON:0002791!7.79e-10!33;UBERON:0003056!1.50e-09!61;UBERON:0001869!1.70e-09!32;UBERON:0000033!3.33e-09!123;UBERON:0000924!5.92e-09!173;UBERON:0006601!5.92e-09!173;UBERON:0004121!1.65e-08!169;UBERON:0000956!2.77e-08!25;UBERON:0000203!2.77e-08!25;UBERON:0000153!3.83e-08!129;UBERON:0007811!3.83e-08!129 | |ontology_enrichment_uberon=UBERON:0005743!7.63e-18!86;UBERON:0000073!2.56e-16!94;UBERON:0001016!2.56e-16!94;UBERON:0001017!3.24e-16!82;UBERON:0000955!8.67e-13!69;UBERON:0006238!8.67e-13!69;UBERON:0001049!1.73e-12!57;UBERON:0005068!1.73e-12!57;UBERON:0006241!1.73e-12!57;UBERON:0007135!1.73e-12!57;UBERON:0002346!2.40e-11!90;UBERON:0002616!7.02e-11!59;UBERON:0003075!7.39e-11!86;UBERON:0007284!7.39e-11!86;UBERON:0001893!1.25e-10!34;UBERON:0002020!1.28e-10!34;UBERON:0003528!1.28e-10!34;UBERON:0002780!2.02e-10!41;UBERON:0001890!2.02e-10!41;UBERON:0006240!2.02e-10!41;UBERON:0001950!2.85e-10!20;UBERON:0002619!4.81e-10!22;UBERON:0003080!5.41e-10!42;UBERON:0002791!7.79e-10!33;UBERON:0003056!1.50e-09!61;UBERON:0001869!1.70e-09!32;UBERON:0000033!3.33e-09!123;UBERON:0000924!5.92e-09!173;UBERON:0006601!5.92e-09!173;UBERON:0004121!1.65e-08!169;UBERON:0000956!2.77e-08!25;UBERON:0000203!2.77e-08!25;UBERON:0000153!3.83e-08!129;UBERON:0007811!3.83e-08!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000200;2.30e-09;6!UBERON:0002771;9.86e-08;2!UBERON:0002702;1.59e-07;2!UBERON:0000078;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0008886;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,1.91e-09,6;UBERON:0002771,9.87e-08,2;UBERON:0002702,1.20e-07,2;UBERON:0000078,1.99e-07,2;UBERON:0007497,1.99e-07,2;UBERON:0003643,1.99e-07,2;UBERON:0003504,1.99e-07,2;UBERON:0003469,1.99e-07,2;UBERON:0003496,1.99e-07,2;UBERON:0002012,1.99e-07,2;UBERON:0008886,1.99e-07,2;UBERON:0007303,1.99e-07,2;UBERON:0002061,1.99e-07,2;UBERON:0005432,1.99e-07,2;UBERON:0004363,1.99e-07,2;UBERON:0001017,8.54e-07,81 | |||
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| ||
|short_description=p@chr16:29883805..29883810,- | |short_description=p@chr16:29883805..29883810,- | ||
}} | }} |
Latest revision as of 07:57, 25 July 2015
Short description: | p@chr16:29883805..29883810, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29883805..29883810, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.54e-14 | 8 |
smooth muscle cell of the pulmonary artery | 1.42e-13 | 1 |
neuron | 3.42e-09 | 6 |
neuroblast | 3.42e-09 | 6 |
electrically signaling cell | 3.42e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
gyrus | 1.91e-09 | 6 |
middle temporal gyrus | 9.87e-08 | 2 |
middle frontal gyrus | 1.20e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.99e-07 | 2 |
developing epithelial placode | 1.99e-07 | 2 |
respiratory system arterial blood vessel | 1.99e-07 | 2 |
respiratory system blood vessel | 1.99e-07 | 2 |
respiratory system artery | 1.99e-07 | 2 |
head blood vessel | 1.99e-07 | 2 |
pulmonary artery | 1.99e-07 | 2 |
pulmonary vascular system | 1.99e-07 | 2 |
pharyngeal vasculature | 1.99e-07 | 2 |
truncus arteriosus | 1.99e-07 | 2 |
aortic sac | 1.99e-07 | 2 |
pharyngeal arch artery | 1.99e-07 | 2 |
central nervous system | 8.54e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.45e-07 | 2 |
carcinosarcoma | 1.45e-07 | 2 |