FFCP PHASE1:Hg19::chr20:36794938..36794945,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7052 | |EntrezGene=7052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11778 | |HGNC=11778 | ||
|TSSclassifier=strong | |||
|UniProt=A2A299 | |UniProt=A2A299 | ||
|association_with_transcript=-28bp_to_ENST00000373403_5end | |association_with_transcript=-28bp_to_ENST00000373403_5end | ||
|cluster_id=chr20:36794938..36794945,- | |||
|coexpression_cluster_id=C4030 | |coexpression_cluster_id=C4030 | ||
|description=CAGE_peak_45_at_TGM2_5end | |description=CAGE_peak_45_at_TGM2_5end | ||
|id=chr20:36794938..36794945,- | |id=chr20:36794938..36794945,- | ||
|ontology_enrichment_celltype=CL:0000349!1.11e-12!3;CL:0002577!1.11e-12!3;CL:0002541!2.02e-12!3;CL:0002536!1.80e-08!2;CL:0002588!6.39e-08!2 | |ontology_enrichment_celltype=CL:0000349!1.11e-12!3;CL:0002577!1.11e-12!3;CL:0002541!2.02e-12!3;CL:0002536!1.80e-08!2;CL:0002588!6.39e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002577;5.00e-45;3!CL:0002541;2.13e-44;3!CL:0000349;2.76e-28;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.00e-45,3;CL:0002541,1.91e-44,3;CL:0000349,2.67e-28,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.61e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!5.25e-27!7;UBERON:0005631!8.08e-26!14;UBERON:0000158!8.08e-26!14;UBERON:0001987!2.43e-16!4;UBERON:0004340!2.43e-16!4;UBERON:0000478!3.74e-14!24;UBERON:0000476!2.02e-12!3;UBERON:0000920!2.02e-12!3;UBERON:0004923!5.65e-07!57 | |ontology_enrichment_uberon=UBERON:0003124!5.25e-27!7;UBERON:0005631!8.08e-26!14;UBERON:0000158!8.08e-26!14;UBERON:0001987!2.43e-16!4;UBERON:0004340!2.43e-16!4;UBERON:0000478!3.74e-14!24;UBERON:0000476!2.02e-12!3;UBERON:0000920!2.02e-12!3;UBERON:0004923!5.65e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.21e-74;4!UBERON:0003124;2.13e-44;3!UBERON:0000920;2.13e-44;3!UBERON:0000478;1.08e-34;24!UBERON:0005631;3.84e-14;10!UBERON:0000158;3.84e-14;10!UBERON:0000077;7.72e-12;27!UBERON:0000474;4.63e-08;37!UBERON:0003100;2.03e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,5.61e-117,7;UBERON:0001987,1.21e-74,4;UBERON:0004340,1.21e-74,4;UBERON:0005631,6.06e-59,14;UBERON:0000158,6.06e-59,14;UBERON:0000920,1.91e-44,3;UBERON:0000478,1.05e-34,24;UBERON:0000995,5.40e-15,21;UBERON:0005795,2.38e-14,22;UBERON:0003975,2.38e-14,22;UBERON:0004923,5.41e-13,66;UBERON:0004175,1.01e-12,25;UBERON:0000077,4.48e-11,29;UBERON:0003134,7.74e-09,37;UBERON:0000474,7.74e-09,37;UBERON:0003100,4.83e-08,41;UBERON:0006554,4.22e-07,47;UBERON:0003133,5.76e-07,48;UBERON:0001008,5.76e-07,48 | |||
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| ||
|short_description=p45@TGM2 | |short_description=p45@TGM2 | ||
}} | }} |
Latest revision as of 03:17, 16 September 2015
Short description: | p45@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_TGM2_5end |
Coexpression cluster: | C4030_Placental_placenta_chorionic_cervix_Lymphatic_Amniotic_spleen |
Association with transcript: | -28bp_to_ENST00000373403_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | A2A299 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.00e-45 | 3 |
chorionic membrane mesenchymal stem cell | 1.91e-44 | 3 |
extraembryonic cell | 2.67e-28 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 5.61e-117 | 7 |
placenta | 1.21e-74 | 4 |
allantois | 1.21e-74 | 4 |
extraembryonic membrane | 6.06e-59 | 14 |
membranous layer | 6.06e-59 | 14 |
egg chorion | 1.91e-44 | 3 |
extraembryonic structure | 1.05e-34 | 24 |
uterus | 5.40e-15 | 21 |
embryonic uterus | 2.38e-14 | 22 |
internal female genitalia | 2.38e-14 | 22 |
organ component layer | 5.41e-13 | 66 |
internal genitalia | 1.01e-12 | 25 |
mixed endoderm/mesoderm-derived structure | 4.48e-11 | 29 |
female reproductive organ | 7.74e-09 | 37 |
female reproductive system | 7.74e-09 | 37 |
female organism | 4.83e-08 | 41 |
urinary system structure | 4.22e-07 | 47 |
reproductive organ | 5.76e-07 | 48 |
renal system | 5.76e-07 | 48 |