FFCP PHASE1:Hg19::chr8:93107660..93107673,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=862 | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |HGNC=1535 | ||
|TSSclassifier=strong | |||
|UniProt=E7EX23 | |UniProt=E7EX23 | ||
|association_with_transcript=0bp_to_ENST00000518954_5end | |association_with_transcript=0bp_to_ENST00000518954_5end | ||
|cluster_id=chr8:93107660..93107673,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_36_at_RUNX1T1_5end | |description=CAGE_peak_36_at_RUNX1T1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.70e-66;3 | |ontology_enrichment_development_v019=UBERON:0006215;4.70e-66;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p36@RUNX1T1 | |short_description=p36@RUNX1T1 | ||
}} | }} |
Latest revision as of 11:49, 19 September 2015
Short description: | p36@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000518954_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E7EX23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.64e-33 | 6 |
rhombic lip | 1.64e-33 | 6 |
regional part of metencephalon | 1.26e-22 | 9 |
metencephalon | 1.26e-22 | 9 |
future metencephalon | 1.26e-22 | 9 |
segmental subdivision of hindbrain | 3.63e-17 | 12 |
hindbrain | 3.63e-17 | 12 |
presumptive hindbrain | 3.63e-17 | 12 |
central nervous system | 8.70e-17 | 81 |
segmental subdivision of nervous system | 6.65e-16 | 13 |
brain | 2.47e-15 | 68 |
future brain | 2.47e-15 | 68 |
nervous system | 3.95e-15 | 89 |
regional part of nervous system | 9.38e-15 | 53 |
regional part of brain | 9.38e-15 | 53 |
neural tube | 5.58e-14 | 56 |
neural rod | 5.58e-14 | 56 |
future spinal cord | 5.58e-14 | 56 |
neural keel | 5.58e-14 | 56 |
posterior neural tube | 7.03e-14 | 15 |
chordal neural plate | 7.03e-14 | 15 |
neocortex | 3.35e-10 | 20 |
neural plate | 1.34e-09 | 82 |
presumptive neural plate | 1.34e-09 | 82 |
regional part of cerebral cortex | 2.28e-09 | 22 |
neurectoderm | 3.73e-09 | 86 |
duodenum | 1.12e-08 | 2 |
cerebral cortex | 2.34e-08 | 25 |
pallium | 2.34e-08 | 25 |
ectoderm-derived structure | 7.05e-08 | 171 |
ectoderm | 7.05e-08 | 171 |
presumptive ectoderm | 7.05e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |
ecto-epithelium | 1.43e-07 | 104 |