FFCP PHASE1:Hg19::chr8:60032432..60032471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000517898,uc003xty.1_5end | |association_with_transcript=-33bp_to_ENST00000517898,uc003xty.1_5end | ||
|cluster_id=chr8:60032432..60032471,+ | |||
|description=CAGE_peak_1_at_ENST00000517898_5end,CAGE_peak_1_at_uc003xty.1_5end | |description=CAGE_peak_1_at_ENST00000517898_5end,CAGE_peak_1_at_uc003xty.1_5end | ||
|id=chr8:60032432..60032471,+ | |id=chr8:60032432..60032471,+ | ||
|ontology_enrichment_celltype=CL:0002319!4.71e-07!25 | |ontology_enrichment_celltype=CL:0002319!4.71e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.13e-13;25!CL:0000540;1.14e-12;6!CL:0000404;1.14e-12;6!CL:0000128;1.08e-10;7!CL:0000126;1.08e-10;7!CL:0000127;1.08e-10;7!CL:0002605;7.92e-10;3!CL:0002367;1.43e-07;2!CL:0000047;2.29e-07;2!CL:0002363;3.47e-07;2!CL:0002602;5.73e-07;2 | |ontology_enrichment_celltype_v019=CL:0002319;1.13e-13;25!CL:0000540;1.14e-12;6!CL:0000404;1.14e-12;6!CL:0000128;1.08e-10;7!CL:0000126;1.08e-10;7!CL:0000127;1.08e-10;7!CL:0002605;7.92e-10;3!CL:0002367;1.43e-07;2!CL:0000047;2.29e-07;2!CL:0002363;3.47e-07;2!CL:0002602;5.73e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.16e-18,8;CL:0002319,1.27e-13,25;CL:0000133,1.06e-12,59;CL:0000540,1.18e-12,6;CL:0000031,1.18e-12,6;CL:0000404,1.18e-12,6;CL:0000128,1.15e-10,7;CL:0000126,1.15e-10,7;CL:0000127,1.15e-10,7;CL:0002453,1.15e-10,7;CL:0002605,7.18e-10,3;CL:0000221,1.16e-09,72;CL:0002367,1.15e-07,2;CL:0002363,2.10e-07,2;CL:0000008,2.10e-07,2;CL:0002602,3.89e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.14e-12;6!CL:0000133;1.75e-08;59!CL:0000008;3.47e-07;2 | |ontology_enrichment_development_v019=CL:0000031;1.14e-12;6!CL:0000133;1.75e-08;59!CL:0000008;3.47e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.56e-19!86;UBERON:0001017!3.72e-18!82;UBERON:0004121!1.05e-17!169;UBERON:0003075!2.06e-17!86;UBERON:0007284!2.06e-17!86;UBERON:0000073!7.76e-17!94;UBERON:0001016!7.76e-17!94;UBERON:0000924!1.23e-16!173;UBERON:0006601!1.23e-16!173;UBERON:0000033!3.39e-16!123;UBERON:0000153!4.55e-16!129;UBERON:0007811!4.55e-16!129;UBERON:0002346!8.81e-16!90;UBERON:0003056!3.89e-14!61;UBERON:0002616!7.55e-14!59;UBERON:0000955!1.01e-13!69;UBERON:0006238!1.01e-13!69;UBERON:0001049!8.79e-13!57;UBERON:0005068!8.79e-13!57;UBERON:0006241!8.79e-13!57;UBERON:0007135!8.79e-13!57;UBERON:0002020!3.64e-11!34;UBERON:0003528!3.64e-11!34;UBERON:0001869!4.01e-11!32;UBERON:0001893!5.90e-11!34;UBERON:0002791!1.55e-10!33;UBERON:0002780!5.25e-10!41;UBERON:0001890!5.25e-10!41;UBERON:0006240!5.25e-10!41;UBERON:0003080!1.49e-09!42;UBERON:0000956!7.49e-09!25;UBERON:0000203!7.49e-09!25;UBERON:0000064!9.34e-09!219;UBERON:0007023!1.12e-08!115;UBERON:0000475!4.51e-08!365;UBERON:0000481!9.59e-08!347;UBERON:0001950!4.86e-07!20 | |ontology_enrichment_uberon=UBERON:0005743!4.56e-19!86;UBERON:0001017!3.72e-18!82;UBERON:0004121!1.05e-17!169;UBERON:0003075!2.06e-17!86;UBERON:0007284!2.06e-17!86;UBERON:0000073!7.76e-17!94;UBERON:0001016!7.76e-17!94;UBERON:0000924!1.23e-16!173;UBERON:0006601!1.23e-16!173;UBERON:0000033!3.39e-16!123;UBERON:0000153!4.55e-16!129;UBERON:0007811!4.55e-16!129;UBERON:0002346!8.81e-16!90;UBERON:0003056!3.89e-14!61;UBERON:0002616!7.55e-14!59;UBERON:0000955!1.01e-13!69;UBERON:0006238!1.01e-13!69;UBERON:0001049!8.79e-13!57;UBERON:0005068!8.79e-13!57;UBERON:0006241!8.79e-13!57;UBERON:0007135!8.79e-13!57;UBERON:0002020!3.64e-11!34;UBERON:0003528!3.64e-11!34;UBERON:0001869!4.01e-11!32;UBERON:0001893!5.90e-11!34;UBERON:0002791!1.55e-10!33;UBERON:0002780!5.25e-10!41;UBERON:0001890!5.25e-10!41;UBERON:0006240!5.25e-10!41;UBERON:0003080!1.49e-09!42;UBERON:0000956!7.49e-09!25;UBERON:0000203!7.49e-09!25;UBERON:0000064!9.34e-09!219;UBERON:0007023!1.12e-08!115;UBERON:0000475!4.51e-08!365;UBERON:0000481!9.59e-08!347;UBERON:0001950!4.86e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001801;1.16e-09;14!UBERON:0005969;1.43e-07;2!UBERON:0003956;1.43e-07;2!UBERON:0003566;3.47e-07;2!UBERON:0001777;3.47e-07;2!UBERON:0006444;5.73e-07;2!UBERON:0001995;5.73e-07;2!UBERON:0004715;5.73e-07;2!UBERON:0000019;7.68e-07;19!UBERON:0000047;7.68e-07;19!UBERON:0004088;7.68e-07;19!UBERON:0010230;7.68e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0001801;1.16e-09;14!UBERON:0005969;1.43e-07;2!UBERON:0003956;1.43e-07;2!UBERON:0003566;3.47e-07;2!UBERON:0001777;3.47e-07;2!UBERON:0006444;5.73e-07;2!UBERON:0001995;5.73e-07;2!UBERON:0004715;5.73e-07;2!UBERON:0000019;7.68e-07;19!UBERON:0000047;7.68e-07;19!UBERON:0004088;7.68e-07;19!UBERON:0010230;7.68e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001801,1.09e-09,14;UBERON:0004121,2.62e-08,171;UBERON:0000924,2.62e-08,171;UBERON:0006601,2.62e-08,171;UBERON:0005969,1.15e-07,2;UBERON:0003956,1.15e-07,2;UBERON:0003566,2.10e-07,2;UBERON:0001777,2.10e-07,2;UBERON:0001017,3.85e-07,81;UBERON:0006444,3.89e-07,2;UBERON:0001995,3.89e-07,2;UBERON:0004715,3.89e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.22779435328084,1.98838425436749,0,0,0,0,2.83178433576612,1.02000345622126,0.940364164434263,2.28988789704845,2.46373965131192,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,3.96513985737078,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,0.289693037921647,0,0,1.41802225746102,0.443458794925128,0.966182642624386,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,1.0135033243499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,1.64025002283658,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.421352420106746,0,1.47401180774122,0.309977343527296,1.18800285728205,0.741800787835671,0,0,2.02003336744879,1.62654075833553,0,0.877955241761676,0,0.600952235626387,0,0.179389635688862,0.427114777637135,0,0,0.515262646192195,0.772921620136887,1.8611685633159,0,0,0.504867548488229,0.184099797284599,2.42469085228218,0.355009592516614,0,0.508681776931463,0,0,0,0.243947412259191,0.530119073285941,1.2781333715647,0.621966330092223,1.00928340350251,2.18986415445498,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,1.95484983186195,6.23960871167747,1.44331342025273,1.15930404975077,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.528290604079356,2.69526550203004,2.30591925467138,2.14612136824846,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,0,0.771622122786426,0,0.266422179016099,0,0,2.46972101034231,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,2.03275699377971,2.60279707715243,3.09315525111078,1.00509759200609,0,0,0,0,0.613457458595699,2.50085260529839,0.542530047399471,0,0,0.315404830067869,0,0,0,1.03473071292505,0,0,0.173767228936166,0.587403472388222,0.686286847621712,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0.655622074797121,0.902399225814824,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0.650756789328606,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,0.899362287916574,0.274537029736055,0.589062011728432,0,0,0,1.46290121726877,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,2.65631221636001,5.24902080367474,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0.28853842595289,2.06311345710401,0.159426272728822,0.399158742865633,0.191505370132367,0,3.57084134302011,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.728163130497081,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0.828851746593443,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,1.77148277162768,0.60298219312704,0,0.442317039724898,1.77328571372128,0.87754158861589,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,10.9886179476517,1.82832850090172,0,0,0,0,0.953619473882272,0,0,0,0,0,0.619202951523374,0.611030144933625,0.296521128680622,0,0,0.404406797884062,0,0.468528891450678,0.182454789215666,0.19566461893209,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.379864775735272,0,0.0801588202515337,0,0,0,0.343609788497747,2.9171149636534,0,1.49103042678519,0,0.135904206073614,0.627617077873999,0.101998217636322,0,0,0.273810757783986,2.55493176133945,0,0,0,0.687481272035051,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,1.60753148465019,2.61324929534744,2.9080823662043,0,0,0.607495566580247,0,0.394028536495991,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.517131825446202,0.66116300871345,0,0,0,0.157204305099666,0,0,0,5.23708173037852,0,0,0,0,0,0,0,0.488105059607853,0.751145584238999,0,0.332787154610557,0.124192805882767,0,0,0.151649117541648,0.570930667089935,0,0,0.144921028610825,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0.192619830407303,0,0,0,0,0.489473409012935,0.179088841081487,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0.245772908753719,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0,0.54604819096007,0,0,0,0,0,0.867479195013787,7.20513673456923,0,2.4499638188256,0.513833800771676,0,0.957803154342908,1.43581454968528,1.00828678488687,0.553258019713743,0.322951291263702,0,0.0981477185010256,0.1179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| ||
|short_description=p1@ENST00000517898,p1@uc003xty.1 | |short_description=p1@ENST00000517898,p1@uc003xty.1 | ||
}} | }} |
Latest revision as of 19:10, 31 July 2015
Short description: | p1@ENST00000517898, p1@uc003xty.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000517898_5end, CAGE_peak_1_at_uc003xty.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000517898, uc003xty.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.16e-18 | 8 |
neural cell | 1.27e-13 | 25 |
neurectodermal cell | 1.06e-12 | 59 |
neuron | 1.18e-12 | 6 |
neuroblast | 1.18e-12 | 6 |
electrically signaling cell | 1.18e-12 | 6 |
oligodendrocyte | 1.15e-10 | 7 |
macroglial cell | 1.15e-10 | 7 |
astrocyte | 1.15e-10 | 7 |
oligodendrocyte precursor cell | 1.15e-10 | 7 |
astrocyte of the cerebral cortex | 7.18e-10 | 3 |
ectodermal cell | 1.16e-09 | 72 |
trabecular meshwork cell | 1.15e-07 | 2 |
keratocyte | 2.10e-07 | 2 |
migratory cranial neural crest cell | 2.10e-07 | 2 |
annulus pulposus cell | 3.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
anterior segment of eyeball | 1.09e-09 | 14 |
ectoderm-derived structure | 2.62e-08 | 171 |
ectoderm | 2.62e-08 | 171 |
presumptive ectoderm | 2.62e-08 | 171 |
reticulum trabeculare | 1.15e-07 | 2 |
aqueous drainage system | 1.15e-07 | 2 |
head connective tissue | 2.10e-07 | 2 |
substantia propria of cornea | 2.10e-07 | 2 |
central nervous system | 3.85e-07 | 81 |
annulus fibrosus | 3.89e-07 | 2 |
fibrocartilage | 3.89e-07 | 2 |
annulus fibrosus disci intervertebralis | 3.89e-07 | 2 |