FFCP PHASE1:Hg19::chr6:31782632..31782654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31782632..31782654,+ | |||
|coexpression_cluster_id=C646 | |coexpression_cluster_id=C646 | ||
|description=CAGE_peak_at_chr6:31782632..31782654,+ | |description=CAGE_peak_at_chr6:31782632..31782654,+ | ||
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|ontology_enrichment_celltype=CL:0000860!1.82e-18!45;CL:0002057!1.58e-17!42;CL:0000557!3.17e-12!71;CL:0002009!1.70e-11!65;CL:0000839!3.04e-11!70;CL:0002194!2.05e-10!63;CL:0000576!2.05e-10!63;CL:0000040!2.05e-10!63;CL:0000559!2.05e-10!63;CL:0000766!6.47e-10!76 | |ontology_enrichment_celltype=CL:0000860!1.82e-18!45;CL:0002057!1.58e-17!42;CL:0000557!3.17e-12!71;CL:0002009!1.70e-11!65;CL:0000839!3.04e-11!70;CL:0002194!2.05e-10!63;CL:0000576!2.05e-10!63;CL:0000040!2.05e-10!63;CL:0000559!2.05e-10!63;CL:0000766!6.47e-10!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.89e-47;33!CL:0002057;9.89e-47;33!CL:0000473;8.39e-31;39!CL:0000234;8.39e-31;39!CL:0000576;3.21e-24;48!CL:0000766;9.24e-16;69!CL:0000763;8.30e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;9.89e-47;33!CL:0002057;9.89e-47;33!CL:0000473;8.39e-31;39!CL:0000234;8.39e-31;39!CL:0000576;3.21e-24;48!CL:0000766;9.24e-16;69!CL:0000763;8.30e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.28e-45,42;CL:0002057,4.28e-45,42;CL:0000473,3.81e-38,48;CL:0000234,3.81e-38,48;CL:0000557,3.97e-34,67;CL:0002009,1.71e-31,61;CL:0000839,1.90e-30,66;CL:0000766,5.49e-29,72;CL:0002194,1.86e-28,59;CL:0000576,1.86e-28,59;CL:0000040,1.86e-28,59;CL:0000559,1.86e-28,59;CL:0000763,1.74e-19,108;CL:0000049,1.74e-19,108;CL:0002031,2.63e-17,120;CL:0000738,5.74e-16,136;CL:0002087,8.84e-13,115;CL:0002032,1.02e-11,161;CL:0000837,1.02e-11,161;CL:0000037,8.98e-11,168;CL:0000988,1.12e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-33;42 | |ontology_enrichment_development_v019=CL:0002057;1.98e-33;42 | ||
|ontology_enrichment_disease=DOID:305!4.80e-13!106;DOID:0050687!2.92e-08!143 | |ontology_enrichment_disease=DOID:305!4.80e-13!106;DOID:0050687!2.92e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!9.09e-12!511;UBERON:0001474!3.42e-10!86;UBERON:0002371!6.03e-10!80;UBERON:0002405!1.10e-09!115;UBERON:0007023!1.01e-07!115;UBERON:0004765!1.55e-07!101;UBERON:0001434!1.55e-07!101;UBERON:0002390!5.90e-07!102;UBERON:0003061!5.90e-07!102 | |ontology_enrichment_uberon=UBERON:0000062!9.09e-12!511;UBERON:0001474!3.42e-10!86;UBERON:0002371!6.03e-10!80;UBERON:0002405!1.10e-09!115;UBERON:0007023!1.01e-07!115;UBERON:0004765!1.55e-07!101;UBERON:0001434!1.55e-07!101;UBERON:0002390!5.90e-07!102;UBERON:0003061!5.90e-07!102 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.12e-29,76;UBERON:0001474,2.14e-27,82;UBERON:0002405,3.39e-24,93;UBERON:0004765,5.89e-24,90;UBERON:0002390,2.24e-22,98;UBERON:0003061,2.24e-22,98;UBERON:0001434,1.91e-20,100;UBERON:0002193,2.96e-19,108;UBERON:0003081,8.88e-09,203;UBERON:0002204,9.25e-09,167 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.410623275218653,0,0.229240217243854,0.57470412614962,0.314843125254717,0.393364276848904,0,0,0,0,0,0,0,0.880801318004542,1.10799081706375,1.20326668482085,1.30206522429511,0,0,0,1.30858414901608,2.64513160582167,7.27752183563449,4.41615170120801,4.93401465626191,15.7950249156503,4.60307827715441,4.61089271752381,14.8983804829809,13.4450815487281,23.2374486090177,31.1480919166986,3.57660445130949,2.18324920046277,9.43838634669355,6.12167784741805,10.5906578935111,19.8194508997703,0.989553900560148,1.99463657621632,8.95071976118658,6.09439401120026,6.80862269629368,9.34233373493363,7.28621129244555,4.17186334736161,16.0719745081786,4.84319602106695,11.0483290796269,13.2914202725171,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,1.28019066769952,0.400395987036012,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.484938170456436,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0.365921118388786,0,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,1.30137480043828,0.674338760312407,1.44606617930089,1.65440959098591,0.435758888184812,0.949082476444386,0.808987848960987,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0,0.219500570817251,0,0,0.277765335475589,0,1.03993478527958,0,0,0,0.288732895522148,0.462985512576611,0,1.58040879591855,3.43394464837949,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0,0,0,0.088048434013226,14.0983118567725,4.32359860250884,13.3816979431963,0,0,2.34434894420094,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.426910231213777,2.72814814301633,0,0,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,6.90374778039739,0.0915694648183434,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27205284349963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,1.78309414843965,0.568272293612826,1.67121139316383,0.296964680832639,1.53580351049616,0,0.984685914873589,0.222617410045812,0,0.63337622438398,1.9924798825107,0.276283915531148,0,0.102268682502155,1.72318727645497,0.311039587661807,0.449341755736634,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0.7812832832557,0.61221999997337,4.34999745260876,0,0,0.236387681767936,0,0.291604613383254,0,1.77148277162768,1.32656082487949,0,2.76448149828062,0,0,1.41620002574687,0.557694977114413,0.307801034015188,0.455768223388005,0,0.359030577639089,0.434589487688032,0.638002319463839,0.0915975934018623,0,0,0,0,0,0.19606253431774,0.335643173951685,0.37950746544837,0,0.210998064528027,0.326465616318295,0.424059214301822,0,0.995261931078505,0.265372693510018,0,0,0,0.104421949505455,0.876214728748802,0.802577647298789,0.468528891450678,0,0.391329237864179,0.242780379534093,2.36750641709634,0,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0.627865836814451,0,0,0,0.520679215005393,2.15583274311631,2.69883540399248,0.34945333648406,0,1.45134496933628,0.219267951258557,0.574808199372465,0.969890164884194,0,0.225980740780532,0.137041924646751,0.19871461170299,0.0633107959558787,0.782205530939212,0.721429382263803,0,0.599428828746391,0.72045208577053,0.114536596165916,0.514784993585894,1.87271237384595,4.22458620922471,0.235694034616795,0,0,3.36594118199862,0.288950589901519,0,2.0535806833799,0,0,0.525774708558629,0.837847203816763,0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| ||
|short_description=p@chr6:31782632..31782654,+ | |short_description=p@chr6:31782632..31782654,+ | ||
}} | }} |
Latest revision as of 00:10, 31 July 2015
Short description: | p@chr6:31782632..31782654, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31782632..31782654, + |
Coexpression cluster: | C646_CD14_Mast_vagina_thymus_MCF7_immature_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.28e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.28e-45 | 42 |
defensive cell | 3.81e-38 | 48 |
phagocyte | 3.81e-38 | 48 |
granulocyte monocyte progenitor cell | 3.97e-34 | 67 |
macrophage dendritic cell progenitor | 1.71e-31 | 61 |
myeloid lineage restricted progenitor cell | 1.90e-30 | 66 |
myeloid leukocyte | 5.49e-29 | 72 |
monopoietic cell | 1.86e-28 | 59 |
monocyte | 1.86e-28 | 59 |
monoblast | 1.86e-28 | 59 |
promonocyte | 1.86e-28 | 59 |
myeloid cell | 1.74e-19 | 108 |
common myeloid progenitor | 1.74e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 2.63e-17 | 120 |
leukocyte | 5.74e-16 | 136 |
nongranular leukocyte | 8.84e-13 | 115 |
hematopoietic oligopotent progenitor cell | 1.02e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-11 | 161 |
hematopoietic stem cell | 8.98e-11 | 168 |
hematopoietic cell | 1.12e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.12e-29 | 76 |
bone element | 2.14e-27 | 82 |
immune system | 3.39e-24 | 93 |
skeletal element | 5.89e-24 | 90 |
hematopoietic system | 2.24e-22 | 98 |
blood island | 2.24e-22 | 98 |
skeletal system | 1.91e-20 | 100 |
hemolymphoid system | 2.96e-19 | 108 |
lateral plate mesoderm | 8.88e-09 | 203 |
musculoskeletal system | 9.25e-09 | 167 |