FFCP PHASE1:Hg19::chr4:140477928..140477990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80854 | |EntrezGene=80854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30412 | |HGNC=30412 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WTS6 | |UniProt=Q8WTS6 | ||
|association_with_transcript=0bp_to_ENST00000274031_5end | |association_with_transcript=0bp_to_ENST00000274031_5end | ||
|cluster_id=chr4:140477928..140477990,- | |||
|coexpression_cluster_id=C3711 | |coexpression_cluster_id=C3711 | ||
|description=CAGE_peak_4_at_SETD7_5end | |description=CAGE_peak_4_at_SETD7_5end | ||
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|ontology_enrichment_celltype=CL:0000738!3.66e-19!140;CL:0002087!2.76e-18!119;CL:0002009!1.77e-17!65;CL:0002057!6.30e-17!42;CL:0000766!2.16e-16!76;CL:0002194!2.62e-16!63;CL:0000576!2.62e-16!63;CL:0000040!2.62e-16!63;CL:0000559!2.62e-16!63;CL:0000860!3.07e-16!45;CL:0000557!6.23e-16!71;CL:0002031!1.18e-15!124;CL:0000839!6.34e-13!70;CL:0000037!6.81e-12!172;CL:0000566!6.81e-12!172;CL:0000988!3.56e-11!182;CL:0002032!4.08e-10!165;CL:0000837!4.08e-10!165;CL:0000763!1.65e-07!112;CL:0000049!1.65e-07!112 | |ontology_enrichment_celltype=CL:0000738!3.66e-19!140;CL:0002087!2.76e-18!119;CL:0002009!1.77e-17!65;CL:0002057!6.30e-17!42;CL:0000766!2.16e-16!76;CL:0002194!2.62e-16!63;CL:0000576!2.62e-16!63;CL:0000040!2.62e-16!63;CL:0000559!2.62e-16!63;CL:0000860!3.07e-16!45;CL:0000557!6.23e-16!71;CL:0002031!1.18e-15!124;CL:0000839!6.34e-13!70;CL:0000037!6.81e-12!172;CL:0000566!6.81e-12!172;CL:0000988!3.56e-11!182;CL:0002032!4.08e-10!165;CL:0000837!4.08e-10!165;CL:0000763!1.65e-07!112;CL:0000049!1.65e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-13;33!CL:0002057;1.71e-13;33!CL:0000576;4.22e-12;48!CL:0000473;9.27e-12;39!CL:0000234;9.27e-12;39!CL:0000766;2.39e-08;69!CL:0000624;4.40e-07;6!CL:0002087;6.54e-07;104!CL:0000840;7.78e-07;5 | |ontology_enrichment_celltype_v019=CL:0000860;1.71e-13;33!CL:0002057;1.71e-13;33!CL:0000576;4.22e-12;48!CL:0000473;9.27e-12;39!CL:0000234;9.27e-12;39!CL:0000766;2.39e-08;69!CL:0000624;4.40e-07;6!CL:0002087;6.54e-07;104!CL:0000840;7.78e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.19e-27,136;CL:0002087,2.82e-25,115;CL:0000860,2.43e-22,42;CL:0002057,2.43e-22,42;CL:0002009,3.24e-22,61;CL:0002031,6.25e-22,120;CL:0000473,1.40e-21,48;CL:0000234,1.40e-21,48;CL:0002194,1.29e-20,59;CL:0000576,1.29e-20,59;CL:0000040,1.29e-20,59;CL:0000559,1.29e-20,59;CL:0000766,2.55e-20,72;CL:0000557,8.42e-20,67;CL:0000037,2.70e-19,168;CL:0000988,1.20e-17,177;CL:0000839,1.74e-16,66;CL:0002032,2.42e-16,161;CL:0000837,2.42e-16,161;CL:0000763,1.96e-11,108;CL:0000049,1.96e-11,108;CL:0002393,5.50e-08,9;CL:0002397,5.50e-08,9;CL:0000624,4.89e-07,6;CL:0000840,8.41e-07,5;CL:0001029,8.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-15;42 | |ontology_enrichment_development_v019=CL:0002057;3.19e-15;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.79e-11!80;UBERON:0002390!4.38e-11!102;UBERON:0003061!4.38e-11!102;UBERON:0002193!9.58e-11!112;UBERON:0001474!1.02e-10!86;UBERON:0007023!1.96e-10!115;UBERON:0002405!7.06e-09!115;UBERON:0001049!3.51e-08!57;UBERON:0005068!3.51e-08!57;UBERON:0006241!3.51e-08!57;UBERON:0007135!3.51e-08!57;UBERON:0002780!3.61e-08!41;UBERON:0001890!3.61e-08!41;UBERON:0006240!3.61e-08!41;UBERON:0003080!1.51e-07!42 | |ontology_enrichment_uberon=UBERON:0002371!2.79e-11!80;UBERON:0002390!4.38e-11!102;UBERON:0003061!4.38e-11!102;UBERON:0002193!9.58e-11!112;UBERON:0001474!1.02e-10!86;UBERON:0007023!1.96e-10!115;UBERON:0002405!7.06e-09!115;UBERON:0001049!3.51e-08!57;UBERON:0005068!3.51e-08!57;UBERON:0006241!3.51e-08!57;UBERON:0007135!3.51e-08!57;UBERON:0002780!3.61e-08!41;UBERON:0001890!3.61e-08!41;UBERON:0006240!3.61e-08!41;UBERON:0003080!1.51e-07!42 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.00e-16,76;UBERON:0002405,2.22e-15,93;UBERON:0002390,6.01e-15,98;UBERON:0003061,6.01e-15,98;UBERON:0001474,1.45e-14,82;UBERON:0002193,3.60e-14,108;UBERON:0004765,1.20e-11,90;UBERON:0001434,2.63e-09,100;UBERON:0007023,1.79e-07,114;UBERON:0003081,3.13e-07,203;UBERON:0001049,5.88e-07,56;UBERON:0005068,5.88e-07,56;UBERON:0006241,5.88e-07,56;UBERON:0007135,5.88e-07,56 | |||
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| ||
|short_description=p4@SETD7 | |short_description=p4@SETD7 | ||
}} | }} |
Latest revision as of 07:16, 25 September 2015
Short description: | p4@SETD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SETD7_5end |
Coexpression cluster: | C3711_CD19_CD4_immature_CD34_CD8_granulocyte_Peripheral |
Association with transcript: | 0bp_to_ENST00000274031_5end |
EntrezGene: | SETD7 |
HGNC: | 30412 |
UniProt: | Q8WTS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.19e-27 | 136 |
nongranular leukocyte | 2.82e-25 | 115 |
classical monocyte | 2.43e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-22 | 42 |
macrophage dendritic cell progenitor | 3.24e-22 | 61 |
hematopoietic lineage restricted progenitor cell | 6.25e-22 | 120 |
defensive cell | 1.40e-21 | 48 |
phagocyte | 1.40e-21 | 48 |
monopoietic cell | 1.29e-20 | 59 |
monocyte | 1.29e-20 | 59 |
monoblast | 1.29e-20 | 59 |
promonocyte | 1.29e-20 | 59 |
myeloid leukocyte | 2.55e-20 | 72 |
granulocyte monocyte progenitor cell | 8.42e-20 | 67 |
hematopoietic stem cell | 2.70e-19 | 168 |
hematopoietic cell | 1.20e-17 | 177 |
myeloid lineage restricted progenitor cell | 1.74e-16 | 66 |
hematopoietic oligopotent progenitor cell | 2.42e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.42e-16 | 161 |
myeloid cell | 1.96e-11 | 108 |
common myeloid progenitor | 1.96e-11 | 108 |
intermediate monocyte | 5.50e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.50e-08 | 9 |
CD4-positive, alpha-beta T cell | 4.89e-07 | 6 |
immature conventional dendritic cell | 8.41e-07 | 5 |
common dendritic progenitor | 8.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.00e-16 | 76 |
immune system | 2.22e-15 | 93 |
hematopoietic system | 6.01e-15 | 98 |
blood island | 6.01e-15 | 98 |
bone element | 1.45e-14 | 82 |
hemolymphoid system | 3.60e-14 | 108 |
skeletal element | 1.20e-11 | 90 |
skeletal system | 2.63e-09 | 100 |
adult organism | 1.79e-07 | 114 |
lateral plate mesoderm | 3.13e-07 | 203 |
neural tube | 5.88e-07 | 56 |
neural rod | 5.88e-07 | 56 |
future spinal cord | 5.88e-07 | 56 |
neural keel | 5.88e-07 | 56 |