FFCP PHASE1:Hg19::chr3:151531919..151531930,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=13 | |EntrezGene=13 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17 | |HGNC=17 | ||
|TSSclassifier=strong | |||
|UniProt=C9K0E9,P22760 | |UniProt=C9K0E9,P22760 | ||
|association_with_transcript=58bp_to_ENST00000488869,NM_001086,uc003eze.2_5end | |association_with_transcript=58bp_to_ENST00000488869,NM_001086,uc003eze.2_5end | ||
|cluster_id=chr3:151531919..151531930,+ | |||
|coexpression_cluster_id=C2727 | |coexpression_cluster_id=C2727 | ||
|description=CAGE_peak_4_at_AADAC_5end | |description=CAGE_peak_4_at_AADAC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.54e-10;12 | |ontology_enrichment_celltype_v019=CL:0000182;7.54e-10;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.10e-10,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.73e-10!14 | |ontology_enrichment_disease=DOID:2394!4.73e-10!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.24e-09!129;UBERON:0004185!8.24e-09!129;UBERON:0001007!2.06e-07!155;UBERON:0001555!2.06e-07!155;UBERON:0007026!2.06e-07!155;UBERON:0001041!5.18e-07!98;UBERON:0005057!6.27e-07!26 | |ontology_enrichment_uberon=UBERON:0004921!8.24e-09!129;UBERON:0004185!8.24e-09!129;UBERON:0001007!2.06e-07!155;UBERON:0001555!2.06e-07!155;UBERON:0007026!2.06e-07!155;UBERON:0001041!5.18e-07!98;UBERON:0005057!6.27e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.60e-16;19!UBERON:0006925;2.60e-16;19!UBERON:0002423;2.15e-12;25!UBERON:0002108;6.63e-11;4!UBERON:0002365;5.61e-10;31!UBERON:0002330;5.61e-10;31!UBERON:0002368;1.16e-08;33!UBERON:0000949;2.78e-08;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.60e-16;19!UBERON:0006925;2.60e-16;19!UBERON:0002423;2.15e-12;25!UBERON:0002108;6.63e-11;4!UBERON:0002365;5.61e-10;31!UBERON:0002330;5.61e-10;31!UBERON:0002368;1.16e-08;33!UBERON:0000949;2.78e-08;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.48e-16,19;UBERON:0006925,2.48e-16,19;UBERON:0008836,2.48e-16,19;UBERON:0008835,4.17e-14,22;UBERON:0003894,4.17e-14,22;UBERON:0009854,1.72e-13,23;UBERON:0007499,2.07e-12,25;UBERON:0009497,2.07e-12,25;UBERON:0000015,2.07e-12,25;UBERON:0002423,2.07e-12,25;UBERON:0006235,2.07e-12,25;UBERON:0004161,2.07e-12,25;UBERON:0009856,6.23e-12,26;UBERON:0002108,6.15e-11,4;UBERON:0002365,5.35e-10,31;UBERON:0002330,5.35e-10,31;UBERON:0000949,1.36e-09,45;UBERON:0002368,7.58e-09,35 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,2.95394953340702,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72734816413214,3.48613383440118,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,9.52589518907536,2.65013777824443,0,0,0,0,0.106787412567695,2.20086027139532,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0.601030435988874,3.04644169735036,0.813741466409323,0,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,5.86523601620379,1.96703604453562,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.870866991587845,0.342233301085281,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,2.95394953340702,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.72734816413214,3.48613383440118,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,9.52589518907536,2.65013777824443,0,0,0,0,0.106787412567695,2.20086027139532,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.53168342911599,0,0.601030435988874,3.04644169735036,0.813741466409323,0,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0,5.86523601620379,1.96703604453562,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.870866991587845,0.342233301085281,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@AADAC | |short_description=p4@AADAC | ||
}} | }} |
Latest revision as of 01:37, 16 September 2015
Short description: | p4@AADAC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AADAC_5end |
Coexpression cluster: | C2727_Mesothelial_mesenchymal_Hepatocyte_liver_small_Cardiac_leiomyoma |
Association with transcript: | 58bp_to_ENST00000488869, NM_001086, uc003eze.2_5end |
EntrezGene: | AADAC |
HGNC: | 17 |
UniProt: | C9K0E9P22760 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.10e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.48e-16 | 19 |
digestive gland | 2.48e-16 | 19 |
liver bud | 2.48e-16 | 19 |
hepatic diverticulum | 4.17e-14 | 22 |
liver primordium | 4.17e-14 | 22 |
digestive tract diverticulum | 1.72e-13 | 23 |
epithelial sac | 2.07e-12 | 25 |
epithelium of foregut-midgut junction | 2.07e-12 | 25 |
anatomical boundary | 2.07e-12 | 25 |
hepatobiliary system | 2.07e-12 | 25 |
foregut-midgut junction | 2.07e-12 | 25 |
septum transversum | 2.07e-12 | 25 |
sac | 6.23e-12 | 26 |
small intestine | 6.15e-11 | 4 |
exocrine gland | 5.35e-10 | 31 |
exocrine system | 5.35e-10 | 31 |
endocrine system | 1.36e-09 | 45 |
endocrine gland | 7.58e-09 | 35 |