FFCP PHASE1:Hg19::chr7:134613535..134613560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_uc011kpv.1_5end | |association_with_transcript=30bp_to_uc011kpv.1_5end | ||
|cluster_id=chr7:134613535..134613560,+ | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_29_at_CALD1_5end | |description=CAGE_peak_29_at_CALD1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.41e-13!180;CL:0000057!2.75e-10!75;CL:0002334!3.50e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.41e-13!180;CL:0000057!2.75e-10!75;CL:0002334!3.50e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.01e-08;12!CL:0002615;9.60e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;2.01e-08;12!CL:0002615;9.60e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.98e-09,76;CL:0002334,2.98e-08,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.37e-08!659;UBERON:0000475!2.85e-08!365;UBERON:0004458!8.79e-08!49;UBERON:0002323!3.33e-07!46;UBERON:0003102!5.91e-07!95 | |ontology_enrichment_uberon=UBERON:0000468!1.37e-08!659;UBERON:0000475!2.85e-08!365;UBERON:0004458!8.79e-08!49;UBERON:0002323!3.33e-07!46;UBERON:0003102!5.91e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.48e-11;6!UBERON:0002358;2.48e-11;6!UBERON:0003684;2.48e-11;6!UBERON:0001178;2.48e-11;6!UBERON:0004457;1.76e-09;9!UBERON:0000042;1.76e-09;9!UBERON:0005904;9.33e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.48e-11;6!UBERON:0002358;2.48e-11;6!UBERON:0003684;2.48e-11;6!UBERON:0001178;2.48e-11;6!UBERON:0004457;1.76e-09;9!UBERON:0000042;1.76e-09;9!UBERON:0005904;9.33e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.60e-11,6;UBERON:0002358,2.60e-11,6;UBERON:0003684,2.60e-11,6;UBERON:0001178,2.60e-11,6;UBERON:0005904,5.88e-08,4;UBERON:0004457,7.64e-07,12;UBERON:0000042,7.64e-07,12 | |||
|phase1_expression=1.45342703416445,4.28201047781966,2.11431606143957,5.00366491765652,3.12872766099101,3.48935409640147,0,0,0.522371256399677,0.245733936501509,0,0,0,0.247532705920093,0,4.03395087871065,3.01347264011988,1.46062018077475,4.39139518911456,0.123121058076788,0,0,0.85870796139317,1.50561867580173,1.75759695432724,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0.361439152384566,0.50133791063589,1.59331170856906,0,0,0.472674085820339,0.665188192387692,1.05401742831751,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0.366403487860815,0,0,0.436094052142534,7.9515512271251,0.886413581652058,0.794455084879313,0.286836620748814,2.12801029319014,0.560677600142307,0,2.22000793575444,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0.448346041655403,0.352303495931295,0,0.140450806702248,0.204154171254893,1.10550885580591,0.516628905878827,1.18800285728205,5.68713937340681,0,0,0.505008341862199,0.875829639103749,0.277064115484183,0,1.5324389789951,1.80285670687916,0.340296549480063,1.61450672119976,1.70845911054854,1.27159140695737,0.300091096084402,0.721367704669072,3.86460810068444,0.930584281657949,1.18143432568886,0.194874010322397,1.00973509697646,0.460249493211497,1.45481451136931,0.710019185033229,1.5112814734146,0.508681776931463,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0.464775771478074,0.518305275076852,0,0,0,12.8648187638577,0,1.85747171212792,0.721879481669586,0.473227200159376,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,1.77236972004421,0,0.245976877086227,0.343135620597051,0,0,0.201057944823262,0.462942225792648,0,0,2.88662684050547,0,0.939269553886573,0.144366447761074,0.462985512576611,0.951270761172991,0,0,0,0,0,0,2.35174979478403,0.708875486211932,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,1.16344544182,0,0,6.64845291462176,9.36066932202295,0,0,0,0.857867961948885,0,0,0.325736184293735,1.06617584622764,0,1.20575750823834,1.74306691720059,3.39908170018994,0,0,0,0.718874566474748,3.44585807502342,1.42636905040718,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.736148950314839,0,0,11.4383973841944,12.8468871933956,4.73107245101804,6.32563640960651,0,0,0,1.99267679560631,0.553107505625109,0.955719759148911,0,0.343143423810856,0,0,0,0,0,0.604780586659361,1.24053903909388,3.06923946576125,4.2099014164961,1.53766979106841,2.55853624533352,4.3430558708774,1.48418066444991,0.308419387605311,0.887808626565635,0.574890092096664,1.03850885836724,0.581051892299796,0.120859449591622,0.40101294060657,0.552485933615378,0.574072240823034,1.27463817604702,1.04899531967539,0,0.231046011313244,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0.640986253728404,0,0.574265537996172,0.650060246036521,1.6068392984416,0.386682873168488,0.308097234229289,0.307007349452259,0.413509717453592,0.751941714077915,1.88521702088497,0.511359764496605,0.445160178233687,0.165284915360978,0.192190067365106,0.127612712494584,0.30347334256665,1.39453664789186,1.25924938732256,0,0.308033580176089,0,0,0,0,0,0.632758849437452,1.71567174531442,0,0,0,0,0.719489830333259,0.823611089208164,0.824686816419805,0,0,0,0,0.243713489631284,0,0,0.848432591722276,1.13008116620243,0,0.66343897524122,0,0,1.31178950409327,0.405820753925408,1.54911749049875,0.281695602532241,0.430234056612155,0.687743287091848,0.7133421029625,0.354761064070598,0.422215270595328,1.64647446479951,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0,0,0,0.140669416410513,0.111308705022906,0,0,3.98495976502139,0,0,0.20453736500431,0,4.97663340258892,0,0,0,3.45251919729268,0,3.33410970433911,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0.442317039724898,0,0.219385397153973,0.435753854075961,0,1.69290568708354,0.227884111694002,0.23056390438806,0.269272933229316,0.434589487688032,0,2.1983422416447,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,1.14994833854341,3.05515072466813,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0.485560759068186,4.73501283419269,0,0,0.379119477770928,0,0,0.664653872707185,0,0,0,0,0.416024019039416,0.867798691675654,0.0979923974143777,0.0870592065804026,1.57254001417827,0,0.387025325156341,0.292357268344742,0.164230914106418,2.32773639572207,0.0882561266915003,0,0.27408384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| ||
|short_description=p29@CALD1 | |short_description=p29@CALD1 | ||
}} | }} |
Latest revision as of 11:54, 16 September 2015
Short description: | p29@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | 30bp_to_uc011kpv.1_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.98e-09 | 76 |
preadipocyte | 2.98e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.60e-11 | 6 |
peritoneum | 2.60e-11 | 6 |
abdominal cavity | 2.60e-11 | 6 |
visceral peritoneum | 2.60e-11 | 6 |
duct of male reproductive system | 5.88e-08 | 4 |
cavity lining | 7.64e-07 | 12 |
serous membrane | 7.64e-07 | 12 |