FFCP PHASE1:Hg19::chr14:76842457..76842494,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2103 | |EntrezGene=2103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3473 | |HGNC=3473 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-205bp_to_ENST00000507951_5end | |association_with_transcript=-205bp_to_ENST00000507951_5end | ||
|cluster_id=chr14:76842457..76842494,+ | |||
|coexpression_cluster_id=C2311 | |coexpression_cluster_id=C2311 | ||
|description=CAGE_peak_1_at_ESRRB_5end | |description=CAGE_peak_1_at_ESRRB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!3.55e-10!5 | |ontology_enrichment_celltype=CL:0002322!3.55e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.69e-09;5 | |ontology_enrichment_celltype_v019=CL:0000333;1.69e-09;5 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.99e-15;3!UBERON:0003918;5.61e-10;10!UBERON:0007687;5.61e-10;10 | |ontology_enrichment_development_v019=UBERON:0003056;3.99e-15;3!UBERON:0003918;5.61e-10;10!UBERON:0007687;5.61e-10;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.09e-26;10!DOID:3095;4.15e-12;22!DOID:2994;4.15e-12;22!DOID:169;4.66e-08;6 | |ontology_enrichment_disease_v019=DOID:171;1.09e-26;10!DOID:3095;4.15e-12;22!DOID:2994;4.15e-12;22!DOID:169;4.66e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.09e-26,10;DOID:3095,4.15e-12,22;DOID:2994,4.15e-12,22;DOID:169,4.66e-08,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002346;8.64e-25;4!UBERON:0000923;8.64e-25;4!UBERON:0010316;8.64e-25;4!UBERON:0005291;8.64e-25;4!UBERON:0002050;5.73e-20;5!UBERON:0005423;5.73e-20;5!UBERON:0000013;1.69e-09;5!UBERON:0002410;1.69e-09;5!UBERON:0000966;1.92e-09;5!UBERON:0005388;1.92e-09;5!UBERON:0001802;1.92e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0002346;8.64e-25;4!UBERON:0000923;8.64e-25;4!UBERON:0010316;8.64e-25;4!UBERON:0005291;8.64e-25;4!UBERON:0002050;5.73e-20;5!UBERON:0005423;5.73e-20;5!UBERON:0000013;1.69e-09;5!UBERON:0002410;1.69e-09;5!UBERON:0000966;1.92e-09;5!UBERON:0005388;1.92e-09;5!UBERON:0001802;1.92e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.69e-09,5;UBERON:0002410,1.69e-09,5;UBERON:0000966,5.36e-08,6;UBERON:0005388,5.36e-08,6;UBERON:0001802,5.36e-08,6;UBERON:0002346,8.61e-07,86 | |||
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|short_description=p1@ESRRB | |short_description=p1@ESRRB | ||
}} | }} |
Latest revision as of 04:38, 16 September 2015
Short description: | p1@ESRRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ESRRB_5end |
Coexpression cluster: | C2311_neuroectodermal_eye_retina_neuroepithelioma_merkel_carcinoid_neuroblastoma |
Association with transcript: | -205bp_to_ENST00000507951_5end |
EntrezGene: | ESRRB |
HGNC: | 3473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.69e-09 | 5 |
autonomic nervous system | 1.69e-09 | 5 |
retina | 5.36e-08 | 6 |
photoreceptor array | 5.36e-08 | 6 |
posterior segment of eyeball | 5.36e-08 | 6 |
neurectoderm | 8.61e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.09e-26 | 10 |
germ cell and embryonal cancer | 4.15e-12 | 22 |
germ cell cancer | 4.15e-12 | 22 |
neuroendocrine tumor | 4.66e-08 | 6 |