FFCP PHASE1:Hg19::chr12:53594231..53594242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3695 | |EntrezGene=3695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6162 | |HGNC=6162 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_AB384724,DQ895448,EU176336_5end | |association_with_transcript=-3bp_to_AB384724,DQ895448,EU176336_5end | ||
|cluster_id=chr12:53594231..53594242,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_6_at_ITGB7_5end | |description=CAGE_peak_6_at_ITGB7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!4.82e-33!24;CL:0000826!4.82e-33!24;CL:0000838!1.23e-14!52;CL:0000784!1.85e-14!3;CL:0000542!2.45e-14!53;CL:0000051!2.45e-14!53;CL:0000819!3.28e-11!1;CL:0000738!4.72e-07!140;CL:0000236!4.92e-07!14 | |ontology_enrichment_celltype=CL:0000945!4.82e-33!24;CL:0000826!4.82e-33!24;CL:0000838!1.23e-14!52;CL:0000784!1.85e-14!3;CL:0000542!2.45e-14!53;CL:0000051!2.45e-14!53;CL:0000819!3.28e-11!1;CL:0000738!4.72e-07!140;CL:0000236!4.92e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.33e-33;24!CL:0000542;1.25e-07;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.33e-33;24!CL:0000542;1.25e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.33e-33,24;CL:0000826,1.33e-33,24;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.25e-07;53 | |ontology_enrichment_development_v019=CL:0000051;1.25e-07;53 | ||
|ontology_enrichment_disease=DOID:0060058!4.16e-16!10;DOID:4960!1.06e-11!1;DOID:0070004!1.06e-11!1;DOID:2355!2.42e-11!1;DOID:0060073!3.28e-11!1;DOID:8675!3.28e-11!1 | |ontology_enrichment_disease=DOID:0060058!4.16e-16!10;DOID:4960!1.06e-11!1;DOID:0070004!1.06e-11!1;DOID:2355!2.42e-11!1;DOID:0060073!3.28e-11!1;DOID:8675!3.28e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:4960;3.99e-50;1!DOID:0070004;3.99e-50;1 | |ontology_enrichment_disease_v019=DOID:4960;3.99e-50;1!DOID:0070004;3.99e-50;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,3.99e-50,1;DOID:0070004,3.99e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.77e-14!3;UBERON:0004854!5.77e-14!3;UBERON:0009034!5.77e-14!3;UBERON:0002095!5.77e-14!3;UBERON:0004782!5.77e-14!3;UBERON:0003281!5.77e-14!3;UBERON:0009664!5.77e-14!3;UBERON:0002296!5.77e-14!3;UBERON:0005602!5.77e-14!3;UBERON:0001179!5.77e-14!3;UBERON:0006293!5.77e-14!3 | |ontology_enrichment_uberon=UBERON:0002106!5.77e-14!3;UBERON:0004854!5.77e-14!3;UBERON:0009034!5.77e-14!3;UBERON:0002095!5.77e-14!3;UBERON:0004782!5.77e-14!3;UBERON:0003281!5.77e-14!3;UBERON:0009664!5.77e-14!3;UBERON:0002296!5.77e-14!3;UBERON:0005602!5.77e-14!3;UBERON:0001179!5.77e-14!3;UBERON:0006293!5.77e-14!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p6@ITGB7 | |short_description=p6@ITGB7 | ||
}} | }} |
Latest revision as of 02:02, 19 September 2015
Short description: | p6@ITGB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ITGB7_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -3bp_to_AB384724, DQ895448, EU176336_5end |
EntrezGene: | ITGB7 |
HGNC: | 6162 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.33e-33 | 24 |
pro-B cell | 1.33e-33 | 24 |
lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.99e-50 | 1 |
myeloma | 3.99e-50 | 1 |