FFCP PHASE1:Hg19::chr7:82072780..82072800,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=781 | |EntrezGene=781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1399 | |HGNC=1399 | ||
|TSSclassifier=strong | |||
|UniProt=F8WC36,P54289,Q9UDQ3 | |UniProt=F8WC36,P54289,Q9UDQ3 | ||
|association_with_transcript=230bp_to_ENST00000284088,ENST00000356253,NM_000722,uc003uhr.1_5end | |association_with_transcript=230bp_to_ENST00000284088,ENST00000356253,NM_000722,uc003uhr.1_5end | ||
|cluster_id=chr7:82072780..82072800,- | |||
|description=CAGE_peak_6_at_CACNA2D1_5end | |description=CAGE_peak_6_at_CACNA2D1_5end | ||
|id=chr7:82072780..82072800,- | |id=chr7:82072780..82072800,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.73e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;5.73e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;2.59e-26;22!UBERON:0001893;6.37e-26;34!UBERON:0002780;6.75e-26;41!UBERON:0001890;6.75e-26;41!UBERON:0001869;2.45e-25;32!UBERON:0003528;3.14e-25;34!UBERON:0002020;3.14e-25;34!UBERON:0002791;5.68e-25;32!UBERON:0001950;3.80e-24;20!UBERON:0000956;2.46e-22;25!UBERON:0000203;2.46e-22;25!UBERON:0000073;9.93e-21;53!UBERON:0002616;9.93e-21;53!UBERON:0001017;3.35e-15;75!UBERON:0000955;1.38e-14;68!UBERON:0001016;1.29e-12;83!UBERON:0002420;3.86e-09;9!UBERON:0007245;3.86e-09;9!UBERON:0010009;3.86e-09;9!UBERON:0010011;3.86e-09;9!UBERON:0000454;3.86e-09;9!UBERON:0000200;4.41e-09;6!UBERON:0000125;6.79e-09;9!UBERON:0002308;6.79e-09;9!UBERON:0002021;1.26e-07;5!UBERON:0001871;1.93e-07;6!UBERON:0001894;2.28e-07;7!UBERON:0001872;3.10e-07;5!UBERON:0000349;3.49e-07;5!UBERON:0009663;4.92e-07;7!UBERON:0000369;6.02e-07;4!UBERON:0002435;6.02e-07;4!UBERON:0000204;6.02e-07;4!UBERON:0002298;6.83e-07;6!UBERON:0003296;7.30e-07;4!UBERON:0010133;7.30e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.59e-26;22!UBERON:0001893;6.37e-26;34!UBERON:0002780;6.75e-26;41!UBERON:0001890;6.75e-26;41!UBERON:0001869;2.45e-25;32!UBERON:0003528;3.14e-25;34!UBERON:0002020;3.14e-25;34!UBERON:0002791;5.68e-25;32!UBERON:0001950;3.80e-24;20!UBERON:0000956;2.46e-22;25!UBERON:0000203;2.46e-22;25!UBERON:0000073;9.93e-21;53!UBERON:0002616;9.93e-21;53!UBERON:0001017;3.35e-15;75!UBERON:0000955;1.38e-14;68!UBERON:0001016;1.29e-12;83!UBERON:0002420;3.86e-09;9!UBERON:0007245;3.86e-09;9!UBERON:0010009;3.86e-09;9!UBERON:0010011;3.86e-09;9!UBERON:0000454;3.86e-09;9!UBERON:0000200;4.41e-09;6!UBERON:0000125;6.79e-09;9!UBERON:0002308;6.79e-09;9!UBERON:0002021;1.26e-07;5!UBERON:0001871;1.93e-07;6!UBERON:0001894;2.28e-07;7!UBERON:0001872;3.10e-07;5!UBERON:0000349;3.49e-07;5!UBERON:0009663;4.92e-07;7!UBERON:0000369;6.02e-07;4!UBERON:0002435;6.02e-07;4!UBERON:0000204;6.02e-07;4!UBERON:0002298;6.83e-07;6!UBERON:0003296;7.30e-07;4!UBERON:0010133;7.30e-07;4 | ||
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| ||
|short_description=p6@CACNA2D1 | |short_description=p6@CACNA2D1 | ||
}} | }} |
Latest revision as of 18:32, 19 September 2015
Short description: | p6@CACNA2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CACNA2D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 230bp_to_ENST00000284088, ENST00000356253, NM_000722, uc003uhr.1_5end |
EntrezGene: | CACNA2D1 |
HGNC: | 1399 |
UniProt: | F8WC36P54289Q9UDQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data