FFCP PHASE1:Hg19::chr22:26961300..26961312,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8459 | |EntrezGene=8459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12021 | |HGNC=12021 | ||
|TSSclassifier=strong | |||
|UniProt=O60704 | |UniProt=O60704 | ||
|association_with_transcript=21bp_to_ENST00000398110_5end | |association_with_transcript=21bp_to_ENST00000398110_5end | ||
|cluster_id=chr22:26961300..26961312,- | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_2_at_TPST2_5end | |description=CAGE_peak_2_at_TPST2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000244!4.99e-12!4;CL:0000731!4.99e-12!4;CL:0002322!3.03e-08!5 | |ontology_enrichment_celltype=CL:0000244!4.99e-12!4;CL:0000731!4.99e-12!4;CL:0002322!3.03e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000244;9.47e-22;4!CL:0000731;9.47e-22;4 | |ontology_enrichment_celltype_v019=CL:0000244;9.47e-22;4!CL:0000731;9.47e-22;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.21e-22,4;CL:0000731,8.21e-22,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.84e-21;2!UBERON:0003124;3.24e-11;1!UBERON:0005754;3.24e-11;1!UBERON:0003918;3.97e-09;10!UBERON:0007687;3.97e-09;10!UBERON:0007123;1.03e-08;5 | |ontology_enrichment_development_v019=UBERON:0007297;9.84e-21;2!UBERON:0003124;3.24e-11;1!UBERON:0005754;3.24e-11;1!UBERON:0003918;3.97e-09;10!UBERON:0007687;3.97e-09;10!UBERON:0007123;1.03e-08;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.68e-21!115;UBERON:0003135!1.00e-11!11;UBERON:0001950!1.41e-10!20;UBERON:0006947!5.12e-10!3;UBERON:0004054!5.12e-10!3;UBERON:0000365!1.31e-09!5;UBERON:0002619!1.77e-09!22;UBERON:0000974!2.94e-09!10;UBERON:0003729!6.95e-09!5;UBERON:0003101!8.46e-09!22;UBERON:0000079!8.46e-09!22;UBERON:0001869!1.14e-08!32;UBERON:0000153!2.23e-08!129;UBERON:0007811!2.23e-08!129;UBERON:0000473!2.37e-08!8;UBERON:0000956!3.73e-08!25;UBERON:0000203!3.73e-08!25;UBERON:0002020!4.43e-08!34;UBERON:0003528!4.43e-08!34;UBERON:0001893!4.96e-08!34;UBERON:0005910!5.41e-08!6;UBERON:0005904!1.40e-07!4;UBERON:0000161!4.12e-07!35;UBERON:0000200!4.40e-07!6;UBERON:0002791!5.14e-07!33;UBERON:0005156!6.06e-07!59;UBERON:0000990!6.06e-07!59;UBERON:0000341!6.86e-07!2;UBERON:0000166!6.99e-07!21 | |ontology_enrichment_uberon=UBERON:0007023!9.68e-21!115;UBERON:0003135!1.00e-11!11;UBERON:0001950!1.41e-10!20;UBERON:0006947!5.12e-10!3;UBERON:0004054!5.12e-10!3;UBERON:0000365!1.31e-09!5;UBERON:0002619!1.77e-09!22;UBERON:0000974!2.94e-09!10;UBERON:0003729!6.95e-09!5;UBERON:0003101!8.46e-09!22;UBERON:0000079!8.46e-09!22;UBERON:0001869!1.14e-08!32;UBERON:0000153!2.23e-08!129;UBERON:0007811!2.23e-08!129;UBERON:0000473!2.37e-08!8;UBERON:0000956!3.73e-08!25;UBERON:0000203!3.73e-08!25;UBERON:0002020!4.43e-08!34;UBERON:0003528!4.43e-08!34;UBERON:0001893!4.96e-08!34;UBERON:0005910!5.41e-08!6;UBERON:0005904!1.40e-07!4;UBERON:0000161!4.12e-07!35;UBERON:0000200!4.40e-07!6;UBERON:0002791!5.14e-07!33;UBERON:0005156!6.06e-07!59;UBERON:0000990!6.06e-07!59;UBERON:0000341!6.86e-07!2;UBERON:0000166!6.99e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.33e-30;3!UBERON:0004054;5.33e-30;3!UBERON:0005904;1.13e-22;4!UBERON:0000341;1.28e-19;2!UBERON:0000365;1.56e-17;5!UBERON:0005910;1.03e-14;6!UBERON:0001301;2.79e-11;1!UBERON:0000998;3.24e-11;1!UBERON:0006868;3.24e-11;1!UBERON:0001000;4.58e-11;1!UBERON:0005352;4.58e-11;1!UBERON:0003101;8.99e-11;22!UBERON:0000079;8.99e-11;22!UBERON:0007029;1.46e-10;1!UBERON:0000058;2.08e-09;10!UBERON:0002046;1.03e-08;5!UBERON:0003135;1.35e-08;11!UBERON:0006554;1.04e-07;30!UBERON:0001008;1.04e-07;30!UBERON:0003937;1.26e-07;12!UBERON:0005399;1.26e-07;12!UBERON:0000486;1.27e-07;12!UBERON:0000974;3.80e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0006947;5.33e-30;3!UBERON:0004054;5.33e-30;3!UBERON:0005904;1.13e-22;4!UBERON:0000341;1.28e-19;2!UBERON:0000365;1.56e-17;5!UBERON:0005910;1.03e-14;6!UBERON:0001301;2.79e-11;1!UBERON:0000998;3.24e-11;1!UBERON:0006868;3.24e-11;1!UBERON:0001000;4.58e-11;1!UBERON:0005352;4.58e-11;1!UBERON:0003101;8.99e-11;22!UBERON:0000079;8.99e-11;22!UBERON:0007029;1.46e-10;1!UBERON:0000058;2.08e-09;10!UBERON:0002046;1.03e-08;5!UBERON:0003135;1.35e-08;11!UBERON:0006554;1.04e-07;30!UBERON:0001008;1.04e-07;30!UBERON:0003937;1.26e-07;12!UBERON:0005399;1.26e-07;12!UBERON:0000486;1.27e-07;12!UBERON:0000974;3.80e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.07e-30,3;UBERON:0004054,5.07e-30,3;UBERON:0005904,1.09e-22,4;UBERON:0000341,1.70e-19,2;UBERON:0006554,1.08e-18,47;UBERON:0001008,2.83e-18,48;UBERON:0000365,1.40e-17,5;UBERON:0005910,9.37e-15,6;UBERON:0001301,2.79e-11,1;UBERON:0000998,3.08e-11,1;UBERON:0006868,3.08e-11,1;UBERON:0001000,4.58e-11,1;UBERON:0005352,4.58e-11,1;UBERON:0003101,9.09e-11,22;UBERON:0000079,9.09e-11,22;UBERON:0007029,1.21e-10,1;UBERON:0002046,1.01e-08,5;UBERON:0004117,1.01e-08,5;UBERON:0007689,1.01e-08,5;UBERON:0007123,1.01e-08,5;UBERON:0003091,1.01e-08,5;UBERON:0003135,1.33e-08,11;UBERON:0003937,1.27e-07,12;UBERON:0005399,1.27e-07,12;UBERON:0007023,6.48e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,4.80133383961574,0.43050537267123,3.36942951335251,3.99087138183008,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31335044559025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3837269045466,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,7.54220910773745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0.303747783290123,0,1.26089131678717,3.82918493385486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0,0.484100767249525,0,0,0.785181748008205,0.11796972334774,0.917142992608395,0,0,0,0,0.150420656698515,0,452.496612503961,0.261906694481422,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,13.0392484139079,0,0,0,0.328863867814245,0,0,1.25588948560822,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01159151174194,0,0,13.1249985559188,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0.509944148709909,0.26721740526556,0.0918948995348449,0,0.757786982182394,0,0,0,1.0661699095049,3.09483760902862,0,0.0620747142958579,0,5.47365561192218,7.68045318041233,0,0,0.0673520530145875,0.573777643141411,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43076350085206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,4.80133383961574,0.43050537267123,3.36942951335251,3.99087138183008,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31335044559025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3837269045466,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,7.54220910773745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0.303747783290123,0,1.26089131678717,3.82918493385486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751145584238999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,0,0,0.484100767249525,0,0,0.785181748008205,0.11796972334774,0.917142992608395,0,0,0,0,0.150420656698515,0,452.496612503961,0.261906694481422,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,13.0392484139079,0,0,0,0.328863867814245,0,0,1.25588948560822,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01159151174194,0,0,13.1249985559188,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0.509944148709909,0.26721740526556,0.0918948995348449,0,0.757786982182394,0,0,0,1.0661699095049,3.09483760902862,0,0.0620747142958579,0,5.47365561192218,7.68045318041233,0,0,0.0673520530145875,0.573777643141411,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p2@TPST2 | |short_description=p2@TPST2 | ||
}} | }} |
Latest revision as of 13:07, 19 September 2015
Short description: | p2@TPST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TPST2_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 21bp_to_ENST00000398110_5end |
EntrezGene: | TPST2 |
HGNC: | 12021 |
UniProt: | O60704 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.21e-22 | 4 |
urothelial cell | 8.21e-22 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.07e-30 | 3 |
internal male genitalia | 5.07e-30 | 3 |
duct of male reproductive system | 1.09e-22 | 4 |
throat | 1.70e-19 | 2 |
urinary system structure | 1.08e-18 | 47 |
renal system | 2.83e-18 | 48 |
urothelium | 1.40e-17 | 5 |
transitional epithelium | 9.37e-15 | 6 |
epididymis | 2.79e-11 | 1 |
seminal vesicle | 3.08e-11 | 1 |
seminal fluid secreting gland | 3.08e-11 | 1 |
vas deferens | 4.58e-11 | 1 |
spermatic cord | 4.58e-11 | 1 |
male organism | 9.09e-11 | 22 |
male reproductive system | 9.09e-11 | 22 |
surface | 1.21e-10 | 1 |
thyroid gland | 1.01e-08 | 5 |
pharyngeal pouch | 1.01e-08 | 5 |
thyroid diverticulum | 1.01e-08 | 5 |
pharyngeal pouch 2 | 1.01e-08 | 5 |
thyroid primordium | 1.01e-08 | 5 |
male reproductive organ | 1.33e-08 | 11 |
sex gland | 1.27e-07 | 12 |
male reproductive gland | 1.27e-07 | 12 |
adult organism | 6.48e-07 | 114 |