FFCP PHASE1:Hg19::chr7:75932909..75932923,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3315 | |EntrezGene=3315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5246 | |HGNC=5246 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3N8 | |UniProt=C9J3N8 | ||
|association_with_transcript=15bp_to_ENST00000429938,uc010ldj.1_5end | |association_with_transcript=15bp_to_ENST00000429938,uc010ldj.1_5end | ||
|cluster_id=chr7:75932909..75932923,+ | |||
|coexpression_cluster_id=C4700 | |coexpression_cluster_id=C4700 | ||
|description=CAGE_peak_6_at_HSPB1_5end | |description=CAGE_peak_6_at_HSPB1_5end | ||
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|ontology_enrichment_celltype=CL:0000542!6.11e-12!53;CL:0000051!6.11e-12!53;CL:0000838!1.39e-11!52;CL:0000084!1.91e-10!25;CL:0000827!1.91e-10!25;CL:0000791!1.22e-08!18;CL:0000789!1.22e-08!18;CL:0002420!1.22e-08!18;CL:0002419!1.22e-08!18;CL:0000790!1.22e-08!18;CL:0000625!5.75e-07!11 | |ontology_enrichment_celltype=CL:0000542!6.11e-12!53;CL:0000051!6.11e-12!53;CL:0000838!1.39e-11!52;CL:0000084!1.91e-10!25;CL:0000827!1.91e-10!25;CL:0000791!1.22e-08!18;CL:0000789!1.22e-08!18;CL:0002420!1.22e-08!18;CL:0002419!1.22e-08!18;CL:0000790!1.22e-08!18;CL:0000625!5.75e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;6.47e-12;25!CL:0000791;1.29e-09;18!CL:0000789;1.29e-09;18!CL:0002419;1.29e-09;18!CL:0000542;5.89e-08;53!CL:0000625;2.30e-07;11 | |ontology_enrichment_celltype_v019=CL:0000084;6.47e-12;25!CL:0000791;1.29e-09;18!CL:0000789;1.29e-09;18!CL:0002419;1.29e-09;18!CL:0000542;5.89e-08;53!CL:0000625;2.30e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.59e-14,53;CL:0000051,5.59e-14,53;CL:0000838,1.40e-13,52;CL:0000084,5.00e-12,25;CL:0000827,5.00e-12,25;CL:0000791,1.07e-09,18;CL:0000789,1.07e-09,18;CL:0002420,1.07e-09,18;CL:0002419,1.07e-09,18;CL:0000790,1.07e-09,18;CL:0000625,1.77e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.29e-09;18!CL:0000051;5.89e-08;53 | |ontology_enrichment_development_v019=CL:0000790;1.29e-09;18!CL:0000051;5.89e-08;53 | ||
|ontology_enrichment_disease=DOID:0050686!8.97e-07!137 | |ontology_enrichment_disease=DOID:0050686!8.97e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.50e-08,51;DOID:0060083,2.50e-08,51;DOID:0050686,1.24e-07,137;DOID:1240,6.50e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.70e-08!15;UBERON:0000179!1.70e-08!15;UBERON:0000463!1.70e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!1.70e-08!15;UBERON:0000179!1.70e-08!15;UBERON:0000463!1.70e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.23e-09;15!UBERON:0000179;3.23e-09;15!UBERON:0000463;3.23e-09;15!UBERON:0002390;1.60e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.23e-09;15!UBERON:0000179;3.23e-09;15!UBERON:0000463;3.23e-09;15!UBERON:0002390;1.60e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.79e-09,15;UBERON:0000179,3.79e-09,15;UBERON:0000463,3.79e-09,15 | |||
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| ||
|short_description=p6@HSPB1 | |short_description=p6@HSPB1 | ||
}} | }} |
Latest revision as of 13:19, 19 September 2015
Short description: | p6@HSPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HSPB1_5end |
Coexpression cluster: | C4700_thymus_adrenal_Whole_acute_CD4_Burkitt_Reticulocytes |
Association with transcript: | 15bp_to_ENST00000429938, uc010ldj.1_5end |
EntrezGene: | HSPB1 |
HGNC: | 5246 |
UniProt: | C9J3N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.59e-14 | 53 |
common lymphoid progenitor | 5.59e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.40e-13 | 52 |
T cell | 5.00e-12 | 25 |
pro-T cell | 5.00e-12 | 25 |
mature alpha-beta T cell | 1.07e-09 | 18 |
alpha-beta T cell | 1.07e-09 | 18 |
immature T cell | 1.07e-09 | 18 |
mature T cell | 1.07e-09 | 18 |
immature alpha-beta T cell | 1.07e-09 | 18 |
CD8-positive, alpha-beta T cell | 1.77e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 3.79e-09 | 15 |
haemolymphatic fluid | 3.79e-09 | 15 |
organism substance | 3.79e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.50e-08 | 51 |
immune system cancer | 2.50e-08 | 51 |
organ system cancer | 1.24e-07 | 137 |
leukemia | 6.50e-07 | 39 |